RNA–Protein interactions for RNA: ENST00000333722.9

C12orf56-201, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best) BASIC

Gene C12orf56, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-201ENST00000333722 RPGRIP1LQ68CZ1 1315 aa16.73■□□□□ 0.27
C12orf56-201ENST00000333722 IPO9Q96P70 1041 aaKnown RBP16.73■□□□□ 0.27
C12orf56-201ENST00000333722 KDM5CP41229 1560 aa16.72■□□□□ 0.27
C12orf56-201ENST00000333722 NME9Q86XW9 330 aa16.72■□□□□ 0.27
C12orf56-201ENST00000333722 YEATS2Q9ULM3 1422 aa16.71■□□□□ 0.27
C12orf56-201ENST00000333722 MAST1Q9Y2H9 1570 aa16.71■□□□□ 0.27
C12orf56-201ENST00000333722 GPRASP1Q5JY77 1395 aa16.71■□□□□ 0.27
C12orf56-201ENST00000333722 TNNQ9UQP3 1299 aa16.7■□□□□ 0.26
C12orf56-201ENST00000333722 NECTIN2Q92692 538 aa16.7■□□□□ 0.26
C12orf56-201ENST00000333722 EMILIN1Q9Y6C2 1016 aa16.7■□□□□ 0.26
C12orf56-201ENST00000333722 ADCY10Q96PN6 1610 aa16.7■□□□□ 0.26
C12orf56-201ENST00000333722 MAGI2Q86UL8 1455 aa16.7■□□□□ 0.26
C12orf56-201ENST00000333722 NPATQ14207 1427 aa16.69■□□□□ 0.26
C12orf56-201ENST00000333722 ABCC1P33527 1531 aa16.69■□□□□ 0.26
C12orf56-201ENST00000333722 AMPHP49418 695 aa16.69■□□□□ 0.26
C12orf56-201ENST00000333722 CENPQQ7L2Z9 268 aaPredicted RBP16.69■□□□□ 0.26
C12orf56-201ENST00000333722 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
C12orf56-201ENST00000333722 LRPPRCP42704 1394 aaKnown RBP16.68■□□□□ 0.26
C12orf56-201ENST00000333722 HSP90AA1P07900 732 aaKnown RBP16.68■□□□□ 0.26
C12orf56-201ENST00000333722 DCTN1Q14203 1278 aa16.67■□□□□ 0.26
C12orf56-201ENST00000333722 FANCIQ9NVI1 1328 aa16.67■□□□□ 0.26
C12orf56-201ENST00000333722 ZKSCAN2Q63HK3 967 aa16.66■□□□□ 0.26
C12orf56-201ENST00000333722 SLKQ9H2G2 1235 aaPredicted RBP16.66■□□□□ 0.26
C12orf56-201ENST00000333722 FYB1O15117 783 aa16.66■□□□□ 0.26
C12orf56-201ENST00000333722 UHRF1BP1LA0JNW5 1464 aa16.66■□□□□ 0.26
C12orf56-201ENST00000333722 SLC4A10Q6U841 1118 aa16.66■□□□□ 0.26
C12orf56-201ENST00000333722 NUDT16Q96DE0 195 aaKnown RBP16.66■□□□□ 0.26
C12orf56-201ENST00000333722 KDM5DQ9BY66 1539 aa16.66■□□□□ 0.26
C12orf56-201ENST00000333722 RTF1Q92541 710 aaKnown RBP16.64■□□□□ 0.26
C12orf56-201ENST00000333722 DZIP1LQ8IYY4 767 aaKnown RBP16.64■□□□□ 0.25
C12orf56-201ENST00000333722 RWDD1Q9H446 243 aaPredicted RBP16.64■□□□□ 0.25
C12orf56-201ENST00000333722 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
C12orf56-201ENST00000333722 TMPOP42166 694 aaKnown RBP16.63■□□□□ 0.25
C12orf56-201ENST00000333722 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.63■□□□□ 0.25
C12orf56-201ENST00000333722 DDRGK1Q96HY6 314 aa16.63■□□□□ 0.25
C12orf56-201ENST00000333722 MFAP1P55081 439 aaKnown RBP16.62■□□□□ 0.25
C12orf56-201ENST00000333722 POGZQ7Z3K3 1410 aa16.62■□□□□ 0.25
C12orf56-201ENST00000333722 A0A0G2JS52 829 aa16.62■□□□□ 0.25
C12orf56-201ENST00000333722 IPO8O15397 1037 aaKnown RBP16.62■□□□□ 0.25
C12orf56-201ENST00000333722 SULT6B1Q6IMI4 303 aa16.62■□□□□ 0.25
C12orf56-201ENST00000333722 NLRP6P59044 892 aa16.61■□□□□ 0.25
C12orf56-201ENST00000333722 XPCQ01831 940 aaPredicted RBP16.61■□□□□ 0.25
C12orf56-201ENST00000333722 ASXL1Q8IXJ9 1541 aa16.6■□□□□ 0.25
C12orf56-201ENST00000333722 CROCC2H7BZ55 1655 aa16.6■□□□□ 0.25
C12orf56-201ENST00000333722 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
C12orf56-201ENST00000333722 NOB1Q9ULX3 412 aaKnown RBP16.6■□□□□ 0.25
C12orf56-201ENST00000333722 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
C12orf56-201ENST00000333722 PRDM15P57071 1507 aaPredicted RBP16.6■□□□□ 0.25
C12orf56-201ENST00000333722 ZNF428Q96B54 188 aa16.6■□□□□ 0.25
C12orf56-201ENST00000333722 ZFYVE16Q7Z3T8 1539 aa16.59■□□□□ 0.25
C12orf56-201ENST00000333722 FAM161AQ3B820 660 aa16.59■□□□□ 0.25
C12orf56-201ENST00000333722 RARSP54136 660 aaKnown RBP16.59■□□□□ 0.25
C12orf56-201ENST00000333722 FAM83GA6ND36 823 aa16.58■□□□□ 0.25
C12orf56-201ENST00000333722 DEKP35659 375 aaKnown RBP16.58■□□□□ 0.24
C12orf56-201ENST00000333722 BACH2Q9BYV9 841 aa16.58■□□□□ 0.24
C12orf56-201ENST00000333722 LNPKQ9C0E8 428 aa16.58■□□□□ 0.24
C12orf56-201ENST00000333722 WASLO00401 505 aaPredicted RBP16.57■□□□□ 0.24
C12orf56-201ENST00000333722 IGHDP01880 384 aa16.57■□□□□ 0.24
C12orf56-201ENST00000333722 MS4A1P11836 297 aa16.57■□□□□ 0.24
C12orf56-201ENST00000333722 SSH1Q8WYL5 1049 aa16.57■□□□□ 0.24
C12orf56-201ENST00000333722 ATAD2Q6PL18 1390 aa16.56■□□□□ 0.24
C12orf56-201ENST00000333722 A0A1W2PP64 1363 aa16.56■□□□□ 0.24
C12orf56-201ENST00000333722 ANKRD45Q5TZF3 282 aa16.56■□□□□ 0.24
C12orf56-201ENST00000333722 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
C12orf56-201ENST00000333722 RLBP1P12271 317 aa16.55■□□□□ 0.24
C12orf56-201ENST00000333722 PTPRTO14522 1441 aa16.54■□□□□ 0.24
C12orf56-201ENST00000333722 AMOTL2Q9Y2J4 779 aa16.54■□□□□ 0.24
C12orf56-201ENST00000333722 HAP1P54257 671 aaPredicted RBP16.53■□□□□ 0.24
C12orf56-201ENST00000333722 MCM10Q7L590 875 aa16.53■□□□□ 0.24
C12orf56-201ENST00000333722 PDZRN3Q9UPQ7 1066 aa16.53■□□□□ 0.24
C12orf56-201ENST00000333722 EIF2AK4Q9P2K8 1649 aaKnown RBP16.53■□□□□ 0.24
C12orf56-201ENST00000333722 WDR63Q8IWG1 891 aa16.53■□□□□ 0.24
C12orf56-201ENST00000333722 BECN1Q14457 450 aa16.53■□□□□ 0.24
C12orf56-201ENST00000333722 ABTB2Q8N961 1025 aa16.53■□□□□ 0.24
C12orf56-201ENST00000333722 PHACTR3Q96KR7 559 aa16.52■□□□□ 0.24
C12orf56-201ENST00000333722 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.24
C12orf56-201ENST00000333722 RTN4Q9NQC3 1192 aaKnown RBP16.52■□□□□ 0.24
C12orf56-201ENST00000333722 ERVK-7P63135 1459 aa16.52■□□□□ 0.23
C12orf56-201ENST00000333722 CALD1Q05682 793 aaKnown RBP16.51■□□□□ 0.23
C12orf56-201ENST00000333722 PDE3AQ14432 1141 aa16.51■□□□□ 0.23
C12orf56-201ENST00000333722 AEBP1Q8IUX7 1158 aa16.51■□□□□ 0.23
C12orf56-201ENST00000333722 NGEFQ8N5V2 710 aa16.51■□□□□ 0.23
C12orf56-201ENST00000333722 POLKQ9UBT6 870 aa16.51■□□□□ 0.23
C12orf56-201ENST00000333722 ANKRD36BQ8N2N9 1353 aa16.51■□□□□ 0.23
C12orf56-201ENST00000333722 TPRNQ4KMQ1 711 aa16.51■□□□□ 0.23
C12orf56-201ENST00000333722 EIF2S2P20042 333 aaKnown RBP16.51■□□□□ 0.23
C12orf56-201ENST00000333722 PSME1Q06323 249 aa16.51■□□□□ 0.23
C12orf56-201ENST00000333722 TMEM57Q8N5G2 664 aa16.5■□□□□ 0.23
C12orf56-201ENST00000333722 CLTCL1P53675 1640 aa16.5■□□□□ 0.23
C12orf56-201ENST00000333722 NKTRP30414 1462 aaKnown RBP16.5■□□□□ 0.23
C12orf56-201ENST00000333722 ESCO1Q5FWF5 840 aa16.5■□□□□ 0.23
C12orf56-201ENST00000333722 TRPM2O94759 1503 aa16.5■□□□□ 0.23
C12orf56-201ENST00000333722 HSP90AB2PQ58FF8 381 aa16.5■□□□□ 0.23
C12orf56-201ENST00000333722 RNF123Q5XPI4 1314 aa16.5■□□□□ 0.23
C12orf56-201ENST00000333722 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
C12orf56-201ENST00000333722 PCDHB15Q9Y5E8 787 aa16.49■□□□□ 0.23
C12orf56-201ENST00000333722 IQGAP3Q86VI3 1631 aa16.49■□□□□ 0.23
C12orf56-201ENST00000333722 ZMYM3Q14202 1370 aa16.49■□□□□ 0.23
C12orf56-201ENST00000333722 USHBP1Q8N6Y0 703 aa16.49■□□□□ 0.23
C12orf56-201ENST00000333722 DDX19BQ9UMR2 479 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms