RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 U2AF1L5P0DN76 240 aaPredicted RBP23.83■■□□□ 1.41
LYSMD4-201ENST00000332728 U2AF1Q01081 240 aaKnown RBP eCLIP23.83■■□□□ 1.41
LYSMD4-201ENST00000332728 SLC52A1Q9NWF4 448 aa23.83■■□□□ 1.41
LYSMD4-201ENST00000332728 QRICH2Q9H0J4 1663 aa23.83■■□□□ 1.41
LYSMD4-201ENST00000332728 RICTORQ6R327 1708 aa23.83■■□□□ 1.41
LYSMD4-201ENST00000332728 RIMBP3CA6NJZ7 1639 aa23.83■■□□□ 1.4
LYSMD4-201ENST00000332728 RIMBP3BA6NNM3 1639 aa23.83■■□□□ 1.4
LYSMD4-201ENST00000332728 RIMBP3Q9UFD9 1639 aa23.83■■□□□ 1.4
LYSMD4-201ENST00000332728 KIAA1210Q9ULL0 1709 aa23.83■■□□□ 1.4
LYSMD4-201ENST00000332728 MYO5BQ9ULV0 1848 aa23.82■■□□□ 1.4
LYSMD4-201ENST00000332728 CGNL1Q0VF96 1302 aa23.81■■□□□ 1.4
LYSMD4-201ENST00000332728 FRAT1Q92837 279 aaPredicted RBP23.81■■□□□ 1.4
LYSMD4-201ENST00000332728 NUTM2FA1L443 756 aa23.8■■□□□ 1.4
LYSMD4-201ENST00000332728 ZNF521Q96K83 1311 aa23.8■■□□□ 1.4
LYSMD4-201ENST00000332728 TCP11L2Q8N4U5 519 aa23.8■■□□□ 1.4
LYSMD4-201ENST00000332728 GLI2P10070 1586 aa23.8■■□□□ 1.4
LYSMD4-201ENST00000332728 NCKAP5LQ9HCH0 1330 aa23.8■■□□□ 1.4
LYSMD4-201ENST00000332728 NEXMIFQ5QGS0 1516 aa23.8■■□□□ 1.4
LYSMD4-201ENST00000332728 CABP1Q9NZU7 370 aa23.79■■□□□ 1.4
LYSMD4-201ENST00000332728 ESF1Q9H501 851 aaKnown RBP23.79■■□□□ 1.4
LYSMD4-201ENST00000332728 PIK3C2BO00750 1634 aa23.77■■□□□ 1.4
LYSMD4-201ENST00000332728 CDK19Q9BWU1 502 aa23.77■■□□□ 1.4
LYSMD4-201ENST00000332728 WWC1Q8IX03 1113 aa23.77■■□□□ 1.4
LYSMD4-201ENST00000332728 SLC24A1O60721 1099 aa23.76■■□□□ 1.39
LYSMD4-201ENST00000332728 PAK3O75914 559 aaPredicted RBP23.76■■□□□ 1.39
LYSMD4-201ENST00000332728 CANXP27824 592 aaKnown RBP23.76■■□□□ 1.39
LYSMD4-201ENST00000332728 TNNQ9UQP3 1299 aa23.76■■□□□ 1.39
LYSMD4-201ENST00000332728 TULP4Q9NRJ4 1543 aa23.76■■□□□ 1.39
LYSMD4-201ENST00000332728 FANCIQ9NVI1 1328 aa23.76■■□□□ 1.39
LYSMD4-201ENST00000332728 A0A1W2PP64 1363 aa23.75■■□□□ 1.39
LYSMD4-201ENST00000332728 TXNDC2Q86VQ3 553 aa23.74■■□□□ 1.39
LYSMD4-201ENST00000332728 NPC1L1Q9UHC9 1359 aa23.74■■□□□ 1.39
LYSMD4-201ENST00000332728 SBNO2Q9Y2G9 1366 aa23.74■■□□□ 1.39
LYSMD4-201ENST00000332728 PANK1Q8TE04 598 aa23.73■■□□□ 1.39
LYSMD4-201ENST00000332728 CEBPAP49715 358 aaPredicted RBP23.72■■□□□ 1.39
LYSMD4-201ENST00000332728 RGS3P49796 1198 aa23.72■■□□□ 1.39
LYSMD4-201ENST00000332728 CLUAP1Q96AJ1 413 aa23.72■■□□□ 1.39
LYSMD4-201ENST00000332728 NEURL4Q96JN8 1562 aa23.7■■□□□ 1.39
LYSMD4-201ENST00000332728 SETBP1Q9Y6X0 1596 aa23.7■■□□□ 1.39
LYSMD4-201ENST00000332728 CFAP53Q96M91 514 aa23.7■■□□□ 1.39
LYSMD4-201ENST00000332728 ZRANB1Q9UGI0 708 aa23.7■■□□□ 1.39
LYSMD4-201ENST00000332728 TSR2Q969E8 191 aaKnown RBP23.69■■□□□ 1.38
LYSMD4-201ENST00000332728 COG6Q9Y2V7 657 aa23.69■■□□□ 1.38
LYSMD4-201ENST00000332728 FYB1O15117 783 aa23.69■■□□□ 1.38
LYSMD4-201ENST00000332728 NBR1Q14596 966 aa23.69■■□□□ 1.38
LYSMD4-201ENST00000332728 RUNDC1Q96C34 613 aa23.69■■□□□ 1.38
LYSMD4-201ENST00000332728 YTHDC2Q9H6S0 1430 aaKnown RBP23.68■■□□□ 1.38
LYSMD4-201ENST00000332728 E9PSI1 815 aa23.68■■□□□ 1.38
LYSMD4-201ENST00000332728 DIP2BQ9P265 1576 aa23.67■■□□□ 1.38
LYSMD4-201ENST00000332728 ANKRD36BQ8N2N9 1353 aa23.67■■□□□ 1.38
LYSMD4-201ENST00000332728 PDE4AP27815 886 aa23.67■■□□□ 1.38
LYSMD4-201ENST00000332728 PREX1Q8TCU6 1659 aa23.66■■□□□ 1.38
LYSMD4-201ENST00000332728 POLR3AO14802 1390 aaPredicted RBP23.66■■□□□ 1.38
LYSMD4-201ENST00000332728 ARHGAP31Q2M1Z3 1444 aa23.66■■□□□ 1.38
LYSMD4-201ENST00000332728 MYO3AQ8NEV4 1616 aa23.66■■□□□ 1.38
LYSMD4-201ENST00000332728 ARHGEF28Q8N1W1 1705 aaKnown RBP23.65■■□□□ 1.38
LYSMD4-201ENST00000332728 SOX12O15370 315 aa23.65■■□□□ 1.38
LYSMD4-201ENST00000332728 ANP32AP39687 249 aaKnown RBP23.63■■□□□ 1.37
LYSMD4-201ENST00000332728 TRMT2AQ8IZ69 625 aaKnown RBP23.63■■□□□ 1.37
LYSMD4-201ENST00000332728 TERF2IPQ9NYB0 399 aa23.63■■□□□ 1.37
LYSMD4-201ENST00000332728 TMEM131LA2VDJ0 1609 aa23.63■■□□□ 1.37
LYSMD4-201ENST00000332728 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.62■■□□□ 1.37
LYSMD4-201ENST00000332728 ZC3H13Q5T200 1668 aaKnown RBP23.62■■□□□ 1.37
LYSMD4-201ENST00000332728 CLTCQ00610 1675 aaKnown RBP23.62■■□□□ 1.37
LYSMD4-201ENST00000332728 NKTRP30414 1462 aaKnown RBP23.61■■□□□ 1.37
LYSMD4-201ENST00000332728 HMOX1P09601 288 aa23.61■■□□□ 1.37
LYSMD4-201ENST00000332728 HDGFL2Q7Z4V5 671 aaPredicted RBP23.61■■□□□ 1.37
LYSMD4-201ENST00000332728 LAS1LQ9Y4W2 734 aaKnown RBP23.6■■□□□ 1.37
LYSMD4-201ENST00000332728 INSRP06213 1382 aa23.6■■□□□ 1.37
LYSMD4-201ENST00000332728 PTPRMP28827 1452 aa23.6■■□□□ 1.37
LYSMD4-201ENST00000332728 RIMS2Q9UQ26 1411 aa23.59■■□□□ 1.37
LYSMD4-201ENST00000332728 NME9Q86XW9 330 aa23.58■■□□□ 1.37
LYSMD4-201ENST00000332728 METP08581 1390 aa23.58■■□□□ 1.37
LYSMD4-201ENST00000332728 SLC26A8Q96RN1 970 aa23.58■■□□□ 1.36
LYSMD4-201ENST00000332728 NOP58Q9Y2X3 529 aaKnown RBP23.58■■□□□ 1.36
LYSMD4-201ENST00000332728 TCERG1O14776 1098 aaKnown RBP23.57■■□□□ 1.36
LYSMD4-201ENST00000332728 IGHDP01880 384 aa23.57■■□□□ 1.36
LYSMD4-201ENST00000332728 RLBP1P12271 317 aa23.56■■□□□ 1.36
LYSMD4-201ENST00000332728 ALKQ9UM73 1620 aa23.56■■□□□ 1.36
LYSMD4-201ENST00000332728 ZMYM3Q14202 1370 aa23.56■■□□□ 1.36
LYSMD4-201ENST00000332728 THUMPD2Q9BTF0 503 aaKnown RBP23.56■■□□□ 1.36
LYSMD4-201ENST00000332728 EMILIN1Q9Y6C2 1016 aa23.56■■□□□ 1.36
LYSMD4-201ENST00000332728 RRS1Q15050 365 aaKnown RBP23.55■■□□□ 1.36
LYSMD4-201ENST00000332728 A2ML1A8K2U0 1454 aa23.54■■□□□ 1.36
LYSMD4-201ENST00000332728 MAPK8IP3Q9UPT6 1336 aa23.53■■□□□ 1.36
LYSMD4-201ENST00000332728 SLC4A3P48751 1232 aa23.53■■□□□ 1.36
LYSMD4-201ENST00000332728 RARSP54136 660 aaKnown RBP23.53■■□□□ 1.36
LYSMD4-201ENST00000332728 BACH2Q9BYV9 841 aa23.53■■□□□ 1.36
LYSMD4-201ENST00000332728 SHPRHQ149N8 1683 aa23.53■■□□□ 1.36
LYSMD4-201ENST00000332728 ABCC11Q96J66 1382 aa23.52■■□□□ 1.36
LYSMD4-201ENST00000332728 RIPK4P57078 832 aa23.51■■□□□ 1.35
LYSMD4-201ENST00000332728 ATAD2Q6PL18 1390 aa23.51■■□□□ 1.35
LYSMD4-201ENST00000332728 DIAPH1O60610 1272 aaKnown RBP23.51■■□□□ 1.35
LYSMD4-201ENST00000332728 EXOSC9Q06265 439 aaKnown RBP23.51■■□□□ 1.35
LYSMD4-201ENST00000332728 IPO9Q96P70 1041 aaKnown RBP23.51■■□□□ 1.35
LYSMD4-201ENST00000332728 ZBTB47Q9UFB7 747 aaPredicted RBP23.51■■□□□ 1.35
LYSMD4-201ENST00000332728 KDM2BQ8NHM5 1336 aa23.5■■□□□ 1.35
LYSMD4-201ENST00000332728 CD163L1Q9NR16 1453 aa23.5■■□□□ 1.35
LYSMD4-201ENST00000332728 TMPOP42166 694 aaKnown RBP23.5■■□□□ 1.35
LYSMD4-201ENST00000332728 BCL11AQ9H165 835 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms