RNA–Protein interactions for RNA: ENST00000332245.9

KLHDC3-203, Transcript of kelch domain containing 3, humanhuman

TSL 2 BASIC

Gene KLHDC3, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-203ENST00000332245 KIAA1210Q9ULL0 1709 aa22.03■■□□□ 1.12
KLHDC3-203ENST00000332245 AHDC1Q5TGY3 1603 aaPredicted RBP22.03■■□□□ 1.12
KLHDC3-203ENST00000332245 TRPM1Q7Z4N2 1603 aa22.02■■□□□ 1.12
KLHDC3-203ENST00000332245 YTHDC2Q9H6S0 1430 aaKnown RBP22■■□□□ 1.11
KLHDC3-203ENST00000332245 ZNF772Q68DY9 489 aaPredicted RBP21.99■■□□□ 1.11
KLHDC3-203ENST00000332245 LRPPRCP42704 1394 aaKnown RBP21.99■■□□□ 1.11
KLHDC3-203ENST00000332245 ROBO2Q9HCK4 1378 aa21.98■■□□□ 1.11
KLHDC3-203ENST00000332245 STK26Q9P289 416 aa21.97■■□□□ 1.11
KLHDC3-203ENST00000332245 KNDC1Q76NI1 1749 aa21.97■■□□□ 1.11
KLHDC3-203ENST00000332245 TECPR2O15040 1411 aa21.97■■□□□ 1.11
KLHDC3-203ENST00000332245 ABCC11Q96J66 1382 aa21.96■■□□□ 1.11
KLHDC3-203ENST00000332245 MST1RQ04912 1400 aa21.96■■□□□ 1.11
KLHDC3-203ENST00000332245 MEX3CQ5U5Q3 659 aaKnown RBP21.96■■□□□ 1.11
KLHDC3-203ENST00000332245 LRP6O75581 1613 aa21.95■■□□□ 1.11
KLHDC3-203ENST00000332245 LRRC59Q96AG4 307 aaKnown RBP21.95■■□□□ 1.1
KLHDC3-203ENST00000332245 PTCH1Q13635 1447 aa21.94■■□□□ 1.1
KLHDC3-203ENST00000332245 SHPRHQ149N8 1683 aa21.94■■□□□ 1.1
KLHDC3-203ENST00000332245 ADGRL3Q9HAR2 1447 aa21.93■■□□□ 1.1
KLHDC3-203ENST00000332245 RALGAPBQ86X10 1494 aa21.92■■□□□ 1.1
KLHDC3-203ENST00000332245 PLEKHH1Q9ULM0 1364 aa21.92■■□□□ 1.1
KLHDC3-203ENST00000332245 WAPLQ7Z5K2 1190 aa21.91■■□□□ 1.1
KLHDC3-203ENST00000332245 TRAK1Q9UPV9 953 aa21.91■■□□□ 1.1
KLHDC3-203ENST00000332245 GPRASP1Q5JY77 1395 aa21.9■■□□□ 1.1
KLHDC3-203ENST00000332245 SIRT1Q96EB6 747 aa21.9■■□□□ 1.1
KLHDC3-203ENST00000332245 DLC1Q96QB1 1528 aa21.89■■□□□ 1.09
KLHDC3-203ENST00000332245 ROCK2O75116 1388 aaKnown RBP21.89■■□□□ 1.09
KLHDC3-203ENST00000332245 ARHGEF28Q8N1W1 1705 aaKnown RBP21.89■■□□□ 1.09
KLHDC3-203ENST00000332245 NALCNQ8IZF0 1738 aa21.87■■□□□ 1.09
KLHDC3-203ENST00000332245 NUTM2BA6NNL0 878 aaPredicted RBP21.87■■□□□ 1.09
KLHDC3-203ENST00000332245 NUTM2EB1AL46 878 aaPredicted RBP21.87■■□□□ 1.09
KLHDC3-203ENST00000332245 RXRBP28702 533 aa21.87■■□□□ 1.09
KLHDC3-203ENST00000332245 NUTM2AQ8IVF1 878 aaPredicted RBP21.87■■□□□ 1.09
KLHDC3-203ENST00000332245 PRAM1Q96QH2 718 aa21.86■■□□□ 1.09
KLHDC3-203ENST00000332245 NHSL1Q5SYE7 1610 aa21.84■■□□□ 1.09
KLHDC3-203ENST00000332245 C1orf167Q5SNV9 1468 aa21.83■■□□□ 1.09
KLHDC3-203ENST00000332245 SAFB2Q14151 953 aaKnown RBP eCLIP21.82■■□□□ 1.08
KLHDC3-203ENST00000332245 DDX17Q92841 729 aaKnown RBP21.82■■□□□ 1.08
KLHDC3-203ENST00000332245 PNPLA6Q8IY17 1366 aa21.81■■□□□ 1.08
KLHDC3-203ENST00000332245 AFF2P51816 1311 aa21.81■■□□□ 1.08
KLHDC3-203ENST00000332245 CARD11Q9BXL7 1154 aa21.81■■□□□ 1.08
KLHDC3-203ENST00000332245 CDK12Q9NYV4 1490 aaPredicted RBP21.8■■□□□ 1.08
KLHDC3-203ENST00000332245 UPF1Q92900 1129 aaKnown RBP eCLIP21.8■■□□□ 1.087e-15■■■■□ 21.9
KLHDC3-203ENST00000332245 SOS2Q07890 1332 aaPredicted RBP21.79■■□□□ 1.08
KLHDC3-203ENST00000332245 ORAI2Q96SN7 254 aa21.78■■□□□ 1.08
KLHDC3-203ENST00000332245 POGKQ9P215 609 aa21.78■■□□□ 1.08
KLHDC3-203ENST00000332245 QTRT2Q9H974 415 aaKnown RBP21.76■■□□□ 1.07
KLHDC3-203ENST00000332245 C8orf37Q96NL8 207 aa21.75■■□□□ 1.07
KLHDC3-203ENST00000332245 QRICH2Q9H0J4 1663 aa21.75■■□□□ 1.07
KLHDC3-203ENST00000332245 MINK1Q8N4C8 1332 aaPredicted RBP21.74■■□□□ 1.07
KLHDC3-203ENST00000332245 RBM6P78332 1123 aaKnown RBP21.74■■□□□ 1.07
KLHDC3-203ENST00000332245 HIRIP3Q9BW71 556 aaPredicted RBP21.74■■□□□ 1.07
KLHDC3-203ENST00000332245 CENPJQ9HC77 1338 aaPredicted RBP21.73■■□□□ 1.07
KLHDC3-203ENST00000332245 ADGRB2O60241 1585 aa21.73■■□□□ 1.07
KLHDC3-203ENST00000332245 CDC42BPGQ6DT37 1551 aa21.73■■□□□ 1.07
KLHDC3-203ENST00000332245 NGLY1Q96IV0 654 aa21.73■■□□□ 1.07
KLHDC3-203ENST00000332245 USP47Q96K76 1375 aa21.7■■□□□ 1.06
KLHDC3-203ENST00000332245 FMN2Q9NZ56 1722 aa21.7■■□□□ 1.06
KLHDC3-203ENST00000332245 ADAMTS2O95450 1211 aa21.69■■□□□ 1.06
KLHDC3-203ENST00000332245 FNBP4Q8N3X1 1017 aaPredicted RBP21.69■■□□□ 1.06
KLHDC3-203ENST00000332245 NPHP3Q7Z494 1330 aa21.68■■□□□ 1.06
KLHDC3-203ENST00000332245 EIF3AQ14152 1382 aaKnown RBP21.68■■□□□ 1.06
KLHDC3-203ENST00000332245 ST20-MTHFSA0A0A6YYL1 179 aa21.68■■□□□ 1.06
KLHDC3-203ENST00000332245 ESCO1Q5FWF5 840 aa21.68■■□□□ 1.06
KLHDC3-203ENST00000332245 USP32Q8NFA0 1604 aa21.67■■□□□ 1.06
KLHDC3-203ENST00000332245 TULP4Q9NRJ4 1543 aa21.67■■□□□ 1.06
KLHDC3-203ENST00000332245 NUTM2FA1L443 756 aa21.66■■□□□ 1.06
KLHDC3-203ENST00000332245 WASLO00401 505 aaPredicted RBP21.66■■□□□ 1.06
KLHDC3-203ENST00000332245 TESK2Q96S53 571 aa21.66■■□□□ 1.06
KLHDC3-203ENST00000332245 RGPD8O14715 1765 aaPredicted RBP21.66■■□□□ 1.06
KLHDC3-203ENST00000332245 USP21Q9UK80 565 aa21.64■■□□□ 1.06
KLHDC3-203ENST00000332245 CDK19Q9BWU1 502 aa21.64■■□□□ 1.05
KLHDC3-203ENST00000332245 TRPC5Q9UL62 973 aaPredicted RBP21.64■■□□□ 1.05
KLHDC3-203ENST00000332245 PRR36Q9H6K5 1346 aa21.63■■□□□ 1.05
KLHDC3-203ENST00000332245 SBNO2Q9Y2G9 1366 aa21.63■■□□□ 1.05
KLHDC3-203ENST00000332245 FOXO3O43524 673 aa21.63■■□□□ 1.05
KLHDC3-203ENST00000332245 RGS12O14924 1447 aa21.62■■□□□ 1.05
KLHDC3-203ENST00000332245 HSPA5P11021 654 aaKnown RBP21.6■■□□□ 1.05
KLHDC3-203ENST00000332245 COL22A1Q8NFW1 1626 aaPredicted RBP21.6■■□□□ 1.05
KLHDC3-203ENST00000332245 PXDNQ92626 1479 aa21.6■■□□□ 1.05
KLHDC3-203ENST00000332245 ATP7BP35670 1465 aa21.59■■□□□ 1.05
KLHDC3-203ENST00000332245 CABP2Q9NPB3 220 aa21.58■■□□□ 1.05
KLHDC3-203ENST00000332245 SLC24A1O60721 1099 aa21.58■■□□□ 1.04
KLHDC3-203ENST00000332245 EIF4G2P78344 907 aaKnown RBP eCLIP21.58■■□□□ 1.04
KLHDC3-203ENST00000332245 ANKARQ7Z5J8 1434 aa21.57■■□□□ 1.04
KLHDC3-203ENST00000332245 EVC2Q86UK5 1308 aa21.56■■□□□ 1.04
KLHDC3-203ENST00000332245 NUDT16Q96DE0 195 aaKnown RBP21.56■■□□□ 1.04
KLHDC3-203ENST00000332245 ATRNO75882 1429 aa21.56■■□□□ 1.04
KLHDC3-203ENST00000332245 XPCQ01831 940 aaPredicted RBP21.55■■□□□ 1.04
KLHDC3-203ENST00000332245 TOPAZ1Q8N9V7 1692 aa21.55■■□□□ 1.04
KLHDC3-203ENST00000332245 SRPK2P78362 688 aaKnown RBP21.54■■□□□ 1.04
KLHDC3-203ENST00000332245 SPATA31A3Q5VYP0 1347 aa21.54■■□□□ 1.04
KLHDC3-203ENST00000332245 BCL9LQ86UU0 1499 aa21.53■■□□□ 1.04
KLHDC3-203ENST00000332245 ATAD2Q6PL18 1390 aa21.53■■□□□ 1.04
KLHDC3-203ENST00000332245 ZEB1P37275 1124 aaPredicted RBP21.52■■□□□ 1.04
KLHDC3-203ENST00000332245 KRT28Q7Z3Y7 464 aa21.52■■□□□ 1.03
KLHDC3-203ENST00000332245 PMFBP1Q8TBY8 1022 aa21.51■■□□□ 1.03
KLHDC3-203ENST00000332245 C11orf95C9JLR9 678 aaPredicted RBP21.5■■□□□ 1.03
KLHDC3-203ENST00000332245 GJD4Q96KN9 370 aaPredicted RBP21.5■■□□□ 1.03
KLHDC3-203ENST00000332245 PHF8Q9UPP1 1060 aa21.5■■□□□ 1.03
KLHDC3-203ENST00000332245 ITSN1Q15811 1721 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms