RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 C19orf44Q9H6X5 657 aa36.88■■■■□ 3.49
SMDT1-201ENST00000331479 UBAP1LF5GYI3 381 aa36.8■■■■□ 3.48
SMDT1-201ENST00000331479 CENPJQ9HC77 1338 aaPredicted RBP36.79■■■■□ 3.48
SMDT1-201ENST00000331479 MINK1Q8N4C8 1332 aaPredicted RBP36.78■■■■□ 3.48
SMDT1-201ENST00000331479 ATF3P18847 181 aa36.78■■■■□ 3.48
SMDT1-201ENST00000331479 DCCP43146 1447 aa36.77■■■■□ 3.48
SMDT1-201ENST00000331479 HIRIP3Q9BW71 556 aaPredicted RBP36.77■■■■□ 3.48
SMDT1-201ENST00000331479 EIF3AQ14152 1382 aaKnown RBP36.76■■■■□ 3.48
SMDT1-201ENST00000331479 TOM1O60784 492 aa36.75■■■■□ 3.47
SMDT1-201ENST00000331479 CADPS2Q86UW7 1296 aa36.75■■■■□ 3.47
SMDT1-201ENST00000331479 QRICH2Q9H0J4 1663 aa36.74■■■■□ 3.47
SMDT1-201ENST00000331479 CDC42BPGQ6DT37 1551 aa36.74■■■■□ 3.47
SMDT1-201ENST00000331479 ADGRB2O60241 1585 aa36.71■■■■□ 3.47
SMDT1-201ENST00000331479 USP47Q96K76 1375 aa36.71■■■■□ 3.47
SMDT1-201ENST00000331479 SLAIN2Q9P270 581 aa36.69■■■■□ 3.46
SMDT1-201ENST00000331479 MST1RQ04912 1400 aa36.67■■■■□ 3.46
SMDT1-201ENST00000331479 ST20-MTHFSA0A0A6YYL1 179 aa36.66■■■■□ 3.46
SMDT1-201ENST00000331479 PIP4K2BP78356 416 aa36.66■■■■□ 3.46
SMDT1-201ENST00000331479 NUTM2FA1L443 756 aa36.65■■■■□ 3.46
SMDT1-201ENST00000331479 FMN2Q9NZ56 1722 aa36.64■■■■□ 3.46
SMDT1-201ENST00000331479 WASLO00401 505 aaPredicted RBP36.63■■■■□ 3.45
SMDT1-201ENST00000331479 FBXO41Q8TF61 875 aa36.61■■■■□ 3.45
SMDT1-201ENST00000331479 C1orf167Q5SNV9 1468 aa36.6■■■■□ 3.45
SMDT1-201ENST00000331479 SCAF1Q9H7N4 1312 aaKnown RBP36.6■■■■□ 3.45
SMDT1-201ENST00000331479 CDK19Q9BWU1 502 aa36.58■■■■□ 3.45
SMDT1-201ENST00000331479 SBNO2Q9Y2G9 1366 aa36.58■■■■□ 3.45
SMDT1-201ENST00000331479 TULP4Q9NRJ4 1543 aa36.58■■■■□ 3.45
SMDT1-201ENST00000331479 TESK2Q96S53 571 aa36.57■■■■□ 3.45
SMDT1-201ENST00000331479 USP32Q8NFA0 1604 aa36.55■■■■□ 3.44
SMDT1-201ENST00000331479 ROBO1Q9Y6N7 1651 aa36.55■■■■□ 3.44
SMDT1-201ENST00000331479 EIF4G2P78344 907 aaKnown RBP eCLIP36.54■■■■□ 3.44
SMDT1-201ENST00000331479 ORAI2Q96SN7 254 aa36.53■■■■□ 3.44
SMDT1-201ENST00000331479 RGPD8O14715 1765 aaPredicted RBP36.53■■■■□ 3.44
SMDT1-201ENST00000331479 PRR36Q9H6K5 1346 aa36.53■■■■□ 3.44
SMDT1-201ENST00000331479 HSPA5P11021 654 aaKnown RBP36.52■■■■□ 3.44
SMDT1-201ENST00000331479 ZEB1P37275 1124 aaPredicted RBP36.52■■■■□ 3.44
SMDT1-201ENST00000331479 BRINP3Q76B58 766 aa36.52■■■■□ 3.44
SMDT1-201ENST00000331479 EVC2Q86UK5 1308 aa36.51■■■■□ 3.44
SMDT1-201ENST00000331479 CABP2Q9NPB3 220 aa36.5■■■■□ 3.43
SMDT1-201ENST00000331479 ANKARQ7Z5J8 1434 aa36.49■■■■□ 3.43
SMDT1-201ENST00000331479 SRPK2P78362 688 aaKnown RBP36.49■■■■□ 3.43
SMDT1-201ENST00000331479 ESCO1Q5FWF5 840 aa36.49■■■■□ 3.43
SMDT1-201ENST00000331479 ATP7BP35670 1465 aa36.47■■■■□ 3.43
SMDT1-201ENST00000331479 NUDT16Q96DE0 195 aaKnown RBP36.47■■■■□ 3.43
SMDT1-201ENST00000331479 DISP3Q9P2K9 1392 aa36.41■■■■□ 3.42
SMDT1-201ENST00000331479 DDX17Q92841 729 aaKnown RBP36.4■■■■□ 3.42
SMDT1-201ENST00000331479 PHF8Q9UPP1 1060 aa36.38■■■■□ 3.41
SMDT1-201ENST00000331479 TOPAZ1Q8N9V7 1692 aa36.37■■■■□ 3.41
SMDT1-201ENST00000331479 SLC24A1O60721 1099 aa36.37■■■■□ 3.41
SMDT1-201ENST00000331479 TMF1P82094 1093 aa36.37■■■■□ 3.41
SMDT1-201ENST00000331479 PMFBP1Q8TBY8 1022 aa36.37■■■■□ 3.41
SMDT1-201ENST00000331479 CCDC61Q9Y6R9 512 aa36.37■■■■□ 3.41
SMDT1-201ENST00000331479 ILDR1Q86SU0 546 aaPredicted RBP36.36■■■■□ 3.41
SMDT1-201ENST00000331479 ITSN1Q15811 1721 aa36.36■■■■□ 3.41
SMDT1-201ENST00000331479 FOXO3O43524 673 aa36.34■■■■□ 3.41
SMDT1-201ENST00000331479 HSPA1LP34931 641 aa36.34■■■■□ 3.41
SMDT1-201ENST00000331479 NHSL1Q5SYE7 1610 aa36.34■■■■□ 3.41
SMDT1-201ENST00000331479 KIF1AQ12756 1690 aa36.34■■■■□ 3.41
SMDT1-201ENST00000331479 AHDC1Q5TGY3 1603 aaPredicted RBP36.33■■■■□ 3.41
SMDT1-201ENST00000331479 PPIP5K1Q6PFW1 1433 aa36.32■■■■□ 3.4
SMDT1-201ENST00000331479 ATAD2Q6PL18 1390 aa36.3■■■■□ 3.4
SMDT1-201ENST00000331479 PUS7Q96PZ0 661 aaKnown RBP36.29■■■■□ 3.4
SMDT1-201ENST00000331479 CABP1Q9NZU7 370 aa36.29■■■■□ 3.4
SMDT1-201ENST00000331479 PHLPP1O60346 1717 aa36.29■■■■□ 3.4
SMDT1-201ENST00000331479 PLEKHG3A1L390 1219 aa36.27■■■■□ 3.4
SMDT1-201ENST00000331479 NPHP3Q7Z494 1330 aa36.26■■■■□ 3.4
SMDT1-201ENST00000331479 XPCQ01831 940 aaPredicted RBP36.26■■■■□ 3.39
SMDT1-201ENST00000331479 C11orf95C9JLR9 678 aaPredicted RBP36.25■■■■□ 3.39
SMDT1-201ENST00000331479 NGDNQ8NEJ9 315 aaKnown RBP36.24■■■■□ 3.39
SMDT1-201ENST00000331479 COL16A1Q07092 1604 aaPredicted RBP36.24■■■■□ 3.39
SMDT1-201ENST00000331479 ACEP12821 1306 aa36.23■■■■□ 3.39
SMDT1-201ENST00000331479 PXDNQ92626 1479 aa36.23■■■■□ 3.39
SMDT1-201ENST00000331479 SOS2Q07890 1332 aaPredicted RBP36.22■■■■□ 3.39
SMDT1-201ENST00000331479 CDCA8Q53HL2 280 aa36.22■■■■□ 3.39
SMDT1-201ENST00000331479 POLR3AO14802 1390 aaPredicted RBP36.21■■■■□ 3.39
SMDT1-201ENST00000331479 TMC1Q8TDI8 760 aa36.2■■■■□ 3.39
SMDT1-201ENST00000331479 SLC12A5Q9H2X9 1139 aa36.2■■■■□ 3.39
SMDT1-201ENST00000331479 PSME1Q06323 249 aa36.19■■■■□ 3.38
SMDT1-201ENST00000331479 KRT28Q7Z3Y7 464 aa36.19■■■■□ 3.38
SMDT1-201ENST00000331479 POLR3GLQ9BT43 218 aa36.15■■■■□ 3.38
SMDT1-201ENST00000331479 CD163L1Q9NR16 1453 aa36.13■■■■□ 3.37
SMDT1-201ENST00000331479 CPSF1Q10570 1443 aaKnown RBP36.11■■■■□ 3.37
SMDT1-201ENST00000331479 LRRC59Q96AG4 307 aaKnown RBP36.1■■■■□ 3.37
SMDT1-201ENST00000331479 NINLQ9Y2I6 1382 aa36.1■■■■□ 3.37
SMDT1-201ENST00000331479 TRPM3Q9HCF6 1732 aaPredicted RBP36.1■■■■□ 3.37
SMDT1-201ENST00000331479 KIF7Q2M1P5 1343 aa36.1■■■■□ 3.37
SMDT1-201ENST00000331479 MYOM1P52179 1685 aa36.1■■■■□ 3.37
SMDT1-201ENST00000331479 AKAP12Q02952 1782 aa36.09■■■■□ 3.37
SMDT1-201ENST00000331479 USP6P35125 1406 aa36.06■■■■□ 3.36
SMDT1-201ENST00000331479 SBNO1A3KN83 1393 aa36.06■■■■□ 3.36
SMDT1-201ENST00000331479 SPATA31A3Q5VYP0 1347 aa36.06■■■■□ 3.36
SMDT1-201ENST00000331479 ZNF692Q9BU19 519 aaPredicted RBP36.05■■■■□ 3.36
SMDT1-201ENST00000331479 A0A1W2PP64 1363 aa36.05■■■■□ 3.36
SMDT1-201ENST00000331479 PAK3O75914 559 aaPredicted RBP36.03■■■■□ 3.36
SMDT1-201ENST00000331479 TERF2IPQ9NYB0 399 aa36.03■■■■□ 3.36
SMDT1-201ENST00000331479 KTN1Q86UP2 1357 aaKnown RBP36.03■■■■□ 3.36
SMDT1-201ENST00000331479 JCADQ9P266 1359 aa36.03■■■■□ 3.36
SMDT1-201ENST00000331479 WASHC2AQ641Q2 1341 aa36.03■■■■□ 3.36
SMDT1-201ENST00000331479 TNS3Q68CZ2 1445 aa36.03■■■■□ 3.36
SMDT1-201ENST00000331479 HDGFL2Q7Z4V5 671 aaPredicted RBP36.02■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms