RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 CENPQQ7L2Z9 268 aaPredicted RBP11.65□□□□□ -0.54
CPNE8-201ENST00000331366 CPS1P31327 1500 aa11.65□□□□□ -0.54
CPNE8-201ENST00000331366 CD163L1Q9NR16 1453 aa11.65□□□□□ -0.55
CPNE8-201ENST00000331366 ITSN1Q15811 1721 aa11.64□□□□□ -0.55
CPNE8-201ENST00000331366 B4GALNT3Q6L9W6 998 aa11.64□□□□□ -0.55
CPNE8-201ENST00000331366 DIP2AQ14689 1571 aa11.63□□□□□ -0.55
CPNE8-201ENST00000331366 SPAG9O60271 1321 aaKnown RBP11.63□□□□□ -0.55
CPNE8-201ENST00000331366 CT47B1P0C2W7 299 aaPredicted RBP11.62□□□□□ -0.55
CPNE8-201ENST00000331366 PNPLA6Q8IY17 1366 aa11.62□□□□□ -0.55
CPNE8-201ENST00000331366 PDE3AQ14432 1141 aa11.62□□□□□ -0.55
CPNE8-201ENST00000331366 ATP7BP35670 1465 aa11.61□□□□□ -0.55
CPNE8-201ENST00000331366 PANK3Q9H999 370 aa11.61□□□□□ -0.55
CPNE8-201ENST00000331366 CCDC136Q96JN2 1154 aa11.61□□□□□ -0.55
CPNE8-201ENST00000331366 ANKRD36BQ8N2N9 1353 aa11.61□□□□□ -0.55
CPNE8-201ENST00000331366 ABCC11Q96J66 1382 aa11.61□□□□□ -0.55
CPNE8-201ENST00000331366 LRRC37A3O60309 1634 aa11.6□□□□□ -0.55
CPNE8-201ENST00000331366 DDRGK1Q96HY6 314 aa11.6□□□□□ -0.55
CPNE8-201ENST00000331366 C14orf93Q9H972 538 aaKnown RBP11.59□□□□□ -0.55
CPNE8-201ENST00000331366 TECPR2O15040 1411 aa11.59□□□□□ -0.55
CPNE8-201ENST00000331366 BRPF1P55201 1214 aaPredicted RBP11.58□□□□□ -0.56
CPNE8-201ENST00000331366 ALKQ9UM73 1620 aa11.58□□□□□ -0.56
CPNE8-201ENST00000331366 PDE4AP27815 886 aa11.58□□□□□ -0.56
CPNE8-201ENST00000331366 DIP2BQ9P265 1576 aa11.58□□□□□ -0.56
CPNE8-201ENST00000331366 ZNF777Q9ULD5 760 aaPredicted RBP11.58□□□□□ -0.56
CPNE8-201ENST00000331366 ANP32AP39687 249 aaKnown RBP11.57□□□□□ -0.56
CPNE8-201ENST00000331366 EXOC6Q8TAG9 804 aa11.57□□□□□ -0.56
CPNE8-201ENST00000331366 PIK3R4Q99570 1358 aa11.57□□□□□ -0.56
CPNE8-201ENST00000331366 E9PSI1 815 aa11.56□□□□□ -0.56
CPNE8-201ENST00000331366 IL16Q14005 1332 aa11.56□□□□□ -0.56
CPNE8-201ENST00000331366 NCOA3Q9Y6Q9 1424 aa11.56□□□□□ -0.56
CPNE8-201ENST00000331366 WDR63Q8IWG1 891 aa11.56□□□□□ -0.56
CPNE8-201ENST00000331366 DLG5Q8TDM6 1919 aa11.56□□□□□ -0.56
CPNE8-201ENST00000331366 FMN2Q9NZ56 1722 aa11.56□□□□□ -0.56
CPNE8-201ENST00000331366 CDK12Q9NYV4 1490 aaPredicted RBP11.55□□□□□ -0.56
CPNE8-201ENST00000331366 C8orf34Q49A92 452 aa11.55□□□□□ -0.56
CPNE8-201ENST00000331366 PPM1GO15355 546 aaPredicted RBP11.55□□□□□ -0.56
CPNE8-201ENST00000331366 FAM135BQ49AJ0 1406 aa11.55□□□□□ -0.56
CPNE8-201ENST00000331366 PHRF1Q9P1Y6 1649 aaKnown RBP11.55□□□□□ -0.56
CPNE8-201ENST00000331366 CGNL1Q0VF96 1302 aa11.55□□□□□ -0.56
CPNE8-201ENST00000331366 GOLGA2Q08379 1002 aa11.54□□□□□ -0.56
CPNE8-201ENST00000331366 ARID3CA6NKF2 412 aa11.53□□□□□ -0.56
CPNE8-201ENST00000331366 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.53□□□□□ -0.56
CPNE8-201ENST00000331366 PPP6R1Q9UPN7 881 aa11.53□□□□□ -0.56
CPNE8-201ENST00000331366 MARF1Q9Y4F3 1742 aaKnown RBP11.53□□□□□ -0.56
CPNE8-201ENST00000331366 PAK3O75914 559 aaPredicted RBP11.53□□□□□ -0.56
CPNE8-201ENST00000331366 ADAMTS8Q9UP79 889 aa11.53□□□□□ -0.56
CPNE8-201ENST00000331366 USP19O94966 1318 aa11.52□□□□□ -0.57
CPNE8-201ENST00000331366 LMTK3Q96Q04 1460 aa11.52□□□□□ -0.57
CPNE8-201ENST00000331366 IRX6P78412 446 aaPredicted RBP11.51□□□□□ -0.57
CPNE8-201ENST00000331366 MAPK8IP3Q9UPT6 1336 aa11.51□□□□□ -0.57
CPNE8-201ENST00000331366 KIF24Q5T7B8 1368 aa11.51□□□□□ -0.57
CPNE8-201ENST00000331366 CARD14Q9BXL6 1004 aa11.51□□□□□ -0.57
CPNE8-201ENST00000331366 UBR1Q8IWV7 1749 aa11.51□□□□□ -0.57
CPNE8-201ENST00000331366 FAM161AQ3B820 660 aa11.51□□□□□ -0.57
CPNE8-201ENST00000331366 YTHDC2Q9H6S0 1430 aaKnown RBP11.5□□□□□ -0.57
CPNE8-201ENST00000331366 FBLN2P98095 1184 aa11.5□□□□□ -0.57
CPNE8-201ENST00000331366 KNSTRNQ9Y448 316 aa11.49□□□□□ -0.57
CPNE8-201ENST00000331366 NSD3Q9BZ95 1437 aa11.49□□□□□ -0.57
CPNE8-201ENST00000331366 CRBNQ96SW2 442 aa11.49□□□□□ -0.57
CPNE8-201ENST00000331366 CD109Q6YHK3 1445 aa11.49□□□□□ -0.57
CPNE8-201ENST00000331366 CACNA1FO60840 1977 aa11.49□□□□□ -0.57
CPNE8-201ENST00000331366 CRYBG1Q9Y4K1 1723 aa11.48□□□□□ -0.57
CPNE8-201ENST00000331366 CDCA7LQ96GN5 454 aa11.48□□□□□ -0.57
CPNE8-201ENST00000331366 PTCH1Q13635 1447 aa11.48□□□□□ -0.57
CPNE8-201ENST00000331366 MAP2P11137 1827 aaKnown RBP11.48□□□□□ -0.57
CPNE8-201ENST00000331366 CPSF1Q10570 1443 aaKnown RBP11.47□□□□□ -0.57
CPNE8-201ENST00000331366 KIF13AQ9H1H9 1805 aa11.47□□□□□ -0.57
CPNE8-201ENST00000331366 ADGRF5Q8IZF2 1346 aa11.47□□□□□ -0.57
CPNE8-201ENST00000331366 CENPJQ9HC77 1338 aaPredicted RBP11.47□□□□□ -0.57
CPNE8-201ENST00000331366 SIRT1Q96EB6 747 aa11.47□□□□□ -0.57
CPNE8-201ENST00000331366 ZBTB47Q9UFB7 747 aaPredicted RBP11.47□□□□□ -0.57
CPNE8-201ENST00000331366 ATAD2Q6PL18 1390 aa11.47□□□□□ -0.57
CPNE8-201ENST00000331366 AATKQ6ZMQ8 1374 aa11.47□□□□□ -0.57
CPNE8-201ENST00000331366 DEKP35659 375 aaKnown RBP11.46□□□□□ -0.57
CPNE8-201ENST00000331366 ZNF428Q96B54 188 aa11.45□□□□□ -0.58
CPNE8-201ENST00000331366 ANO8Q9HCE9 1232 aaPredicted RBP11.45□□□□□ -0.58
CPNE8-201ENST00000331366 CAMTA1Q9Y6Y1 1673 aa11.45□□□□□ -0.58
CPNE8-201ENST00000331366 PLEKHF1Q96S99 279 aa11.44□□□□□ -0.58
CPNE8-201ENST00000331366 KIF16BQ96L93 1317 aa11.44□□□□□ -0.58
CPNE8-201ENST00000331366 FAM208AQ9UK61 1670 aaKnown RBP11.44□□□□□ -0.58
CPNE8-201ENST00000331366 RUNDC1Q96C34 613 aa11.44□□□□□ -0.58
CPNE8-201ENST00000331366 KDM2AQ9Y2K7 1162 aa11.44□□□□□ -0.58
CPNE8-201ENST00000331366 WWC1Q8IX03 1113 aa11.43□□□□□ -0.58
CPNE8-201ENST00000331366 XRN1Q8IZH2 1706 aaKnown RBP11.43□□□□□ -0.58
CPNE8-201ENST00000331366 A2ML1A8K2U0 1454 aa11.43□□□□□ -0.58
CPNE8-201ENST00000331366 HDAC1Q13547 482 aaPredicted RBP11.42□□□□□ -0.58
CPNE8-201ENST00000331366 ADAMTS7Q9UKP4 1686 aa11.41□□□□□ -0.58
CPNE8-201ENST00000331366 WDR43Q15061 677 aaKnown RBP eCLIP11.41□□□□□ -0.58
CPNE8-201ENST00000331366 ANTXR1Q9H6X2 564 aa11.41□□□□□ -0.58
CPNE8-201ENST00000331366 SLC52A1Q9NWF4 448 aa11.41□□□□□ -0.58
CPNE8-201ENST00000331366 AFAP1Q8N556 730 aa11.4□□□□□ -0.58
CPNE8-201ENST00000331366 DDIT3P35638 169 aa11.4□□□□□ -0.58
CPNE8-201ENST00000331366 C20orf194Q5TEA3 1177 aa11.39□□□□□ -0.59
CPNE8-201ENST00000331366 PMFBP1Q8TBY8 1022 aa11.39□□□□□ -0.59
CPNE8-201ENST00000331366 RARSP54136 660 aaKnown RBP11.39□□□□□ -0.59
CPNE8-201ENST00000331366 PEAK1Q9H792 1746 aa11.38□□□□□ -0.59
CPNE8-201ENST00000331366 SPINK5Q9NQ38 1064 aaPredicted RBP11.38□□□□□ -0.59
CPNE8-201ENST00000331366 ZNF326Q5BKZ1 582 aaKnown RBP11.38□□□□□ -0.59
CPNE8-201ENST00000331366 MED1Q15648 1581 aaPredicted RBP11.38□□□□□ -0.59
CPNE8-201ENST00000331366 SLIT1O75093 1534 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms