RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 HSCBQ8IWL3 235 aa22.98■■□□□ 1.27
SOCS3-201ENST00000330871 NPC1L1Q9UHC9 1359 aa22.97■■□□□ 1.27
SOCS3-201ENST00000330871 SYNMO15061 1565 aa22.96■■□□□ 1.27
SOCS3-201ENST00000330871 E9PSI1 815 aa22.96■■□□□ 1.27
SOCS3-201ENST00000330871 PMFBP1Q8TBY8 1022 aa22.96■■□□□ 1.27
SOCS3-201ENST00000330871 MSNP26038 577 aaKnown RBP22.96■■□□□ 1.27
SOCS3-201ENST00000330871 STAC3Q96MF2 364 aa22.96■■□□□ 1.27
SOCS3-201ENST00000330871 RTEL1-TNFRSF6BF6WH68 1400 aa22.95■■□□□ 1.26
SOCS3-201ENST00000330871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.95■■□□□ 1.26
SOCS3-201ENST00000330871 TTC37Q6PGP7 1564 aa22.95■■□□□ 1.26
SOCS3-201ENST00000330871 CCDC173Q0VFZ6 552 aa22.95■■□□□ 1.26
SOCS3-201ENST00000330871 NASPP49321 788 aaPredicted RBP22.94■■□□□ 1.26
SOCS3-201ENST00000330871 PRDM10Q9NQV6 1147 aa22.94■■□□□ 1.26
SOCS3-201ENST00000330871 SCAF11Q99590 1463 aaKnown RBP22.94■■□□□ 1.26
SOCS3-201ENST00000330871 IQGAP1P46940 1657 aa22.94■■□□□ 1.26
SOCS3-201ENST00000330871 RLBP1P12271 317 aa22.94■■□□□ 1.26
SOCS3-201ENST00000330871 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.94■■□□□ 1.26
SOCS3-201ENST00000330871 ZHX1Q9UKY1 873 aaPredicted RBP22.93■■□□□ 1.26
SOCS3-201ENST00000330871 MADDQ8WXG6 1647 aa22.92■■□□□ 1.26
SOCS3-201ENST00000330871 BCL2L13Q9BXK5 485 aa22.92■■□□□ 1.26
SOCS3-201ENST00000330871 FOXD4L1Q9NU39 408 aa22.92■■□□□ 1.26
SOCS3-201ENST00000330871 NGEFQ8N5V2 710 aa22.91■■□□□ 1.26
SOCS3-201ENST00000330871 ABCC2Q92887 1545 aa22.91■■□□□ 1.26
SOCS3-201ENST00000330871 SCAPERQ9BY12 1400 aa22.91■■□□□ 1.26
SOCS3-201ENST00000330871 PPP1R9BQ96SB3 815 aa22.9■■□□□ 1.26
SOCS3-201ENST00000330871 DDIT3P35638 169 aa22.88■■□□□ 1.25
SOCS3-201ENST00000330871 GBP4Q96PP9 640 aa22.88■■□□□ 1.25
SOCS3-201ENST00000330871 UQCRHLA0A096LP55 91 aa22.88■■□□□ 1.25
SOCS3-201ENST00000330871 UQCRHP07919 91 aa22.88■■□□□ 1.25
SOCS3-201ENST00000330871 XPCQ01831 940 aaPredicted RBP22.87■■□□□ 1.25
SOCS3-201ENST00000330871 ANP32BQ92688 251 aaKnown RBP22.87■■□□□ 1.25
SOCS3-201ENST00000330871 MAP7D2Q96T17 732 aa22.87■■□□□ 1.25
SOCS3-201ENST00000330871 RWDD1Q9H446 243 aaPredicted RBP22.86■■□□□ 1.25
SOCS3-201ENST00000330871 SLC24A1O60721 1099 aa22.85■■□□□ 1.25
SOCS3-201ENST00000330871 NEUROD2Q15784 382 aa22.85■■□□□ 1.25
SOCS3-201ENST00000330871 SKOR2Q2VWA4 1001 aaPredicted RBP22.85■■□□□ 1.25
SOCS3-201ENST00000330871 HSP90AB1P08238 724 aaKnown RBP22.84■■□□□ 1.25
SOCS3-201ENST00000330871 NINLQ9Y2I6 1382 aa22.83■■□□□ 1.25
SOCS3-201ENST00000330871 FGD1P98174 961 aa22.83■■□□□ 1.25
SOCS3-201ENST00000330871 TERF1P54274 439 aa22.83■■□□□ 1.24
SOCS3-201ENST00000330871 RAB3GAP1Q15042 981 aa22.83■■□□□ 1.24
SOCS3-201ENST00000330871 SMAP1Q8IYB5 467 aaPredicted RBP22.83■■□□□ 1.24
SOCS3-201ENST00000330871 EFCAB2Q5VUJ9 269 aa22.82■■□□□ 1.24
SOCS3-201ENST00000330871 SPHKAPQ2M3C7 1700 aa22.82■■□□□ 1.24
SOCS3-201ENST00000330871 NCOA3Q9Y6Q9 1424 aa22.82■■□□□ 1.24
SOCS3-201ENST00000330871 RARSP54136 660 aaKnown RBP22.82■■□□□ 1.24
SOCS3-201ENST00000330871 MYOM1P52179 1685 aa22.82■■□□□ 1.24
SOCS3-201ENST00000330871 TRPM2O94759 1503 aa22.82■■□□□ 1.24
SOCS3-201ENST00000330871 ZMYM3Q14202 1370 aa22.82■■□□□ 1.24
SOCS3-201ENST00000330871 PLCH2O75038 1416 aa22.8■■□□□ 1.24
SOCS3-201ENST00000330871 WWC1Q8IX03 1113 aa22.8■■□□□ 1.24
SOCS3-201ENST00000330871 PTPRTO14522 1441 aa22.8■■□□□ 1.24
SOCS3-201ENST00000330871 SMC5Q8IY18 1101 aa22.79■■□□□ 1.24
SOCS3-201ENST00000330871 RRP7AQ9Y3A4 280 aaKnown RBP22.79■■□□□ 1.24
SOCS3-201ENST00000330871 DDX49Q9Y6V7 483 aaKnown RBP22.78■■□□□ 1.24
SOCS3-201ENST00000330871 KDM5AP29375 1690 aaKnown RBP22.78■■□□□ 1.24
SOCS3-201ENST00000330871 SSFA2P28290 1259 aa22.77■■□□□ 1.24
SOCS3-201ENST00000330871 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.77■■□□□ 1.24
SOCS3-201ENST00000330871 CEP152O94986 1710 aa22.77■■□□□ 1.24
SOCS3-201ENST00000330871 CD2BP2O95400 341 aaKnown RBP22.75■■□□□ 1.23
SOCS3-201ENST00000330871 CARD14Q9BXL6 1004 aa22.75■■□□□ 1.23
SOCS3-201ENST00000330871 CIZ1Q9ULV3 898 aaPredicted RBP22.75■■□□□ 1.23
SOCS3-201ENST00000330871 TRAPPC8Q9Y2L5 1435 aa22.75■■□□□ 1.23
SOCS3-201ENST00000330871 NCLP19338 710 aaKnown RBP22.74■■□□□ 1.23
SOCS3-201ENST00000330871 NOL7Q9UMY1 257 aaKnown RBP22.74■■□□□ 1.23
SOCS3-201ENST00000330871 SPAG9O60271 1321 aaKnown RBP22.73■■□□□ 1.23
SOCS3-201ENST00000330871 CLTCL1P53675 1640 aa22.73■■□□□ 1.23
SOCS3-201ENST00000330871 ZBTB7CA1YPR0 619 aa22.73■■□□□ 1.23
SOCS3-201ENST00000330871 SNX21Q969T3 373 aa22.73■■□□□ 1.23
SOCS3-201ENST00000330871 POLR3AO14802 1390 aaPredicted RBP22.73■■□□□ 1.23
SOCS3-201ENST00000330871 KIAA1210Q9ULL0 1709 aa22.72■■□□□ 1.23
SOCS3-201ENST00000330871 ZNF500O60304 480 aaPredicted RBP22.72■■□□□ 1.23
SOCS3-201ENST00000330871 ABCC1P33527 1531 aa22.72■■□□□ 1.23
SOCS3-201ENST00000330871 ERVK-7P63135 1459 aa22.71■■□□□ 1.23
SOCS3-201ENST00000330871 DYNC1I1O14576 645 aa22.71■■□□□ 1.23
SOCS3-201ENST00000330871 PTMSP20962 102 aa22.7■■□□□ 1.22
SOCS3-201ENST00000330871 CFAP70Q5T0N1 1121 aa22.7■■□□□ 1.22
SOCS3-201ENST00000330871 GOLGA6L22H0YM25 854 aa22.7■■□□□ 1.22
SOCS3-201ENST00000330871 RBM25P49756 843 aaKnown RBP22.7■■□□□ 1.22
SOCS3-201ENST00000330871 KLHL40Q2TBA0 621 aa22.7■■□□□ 1.22
SOCS3-201ENST00000330871 CHD1O14646 1710 aa22.7■■□□□ 1.22
SOCS3-201ENST00000330871 CAVIN1Q6NZI2 390 aaKnown RBP22.69■■□□□ 1.22
SOCS3-201ENST00000330871 RBSNQ9H1K0 784 aa22.69■■□□□ 1.22
SOCS3-201ENST00000330871 MVPQ14764 893 aaKnown RBP22.69■■□□□ 1.22
SOCS3-201ENST00000330871 RBM42Q9BTD8 480 aaKnown RBP22.69■■□□□ 1.22
SOCS3-201ENST00000330871 JARID2Q92833 1246 aaPredicted RBP22.68■■□□□ 1.22
SOCS3-201ENST00000330871 MTERF4Q7Z6M4 381 aaKnown RBP22.68■■□□□ 1.22
SOCS3-201ENST00000330871 BAG4O95429 457 aaKnown RBP22.67■■□□□ 1.22
SOCS3-201ENST00000330871 DMTNQ08495 405 aa22.67■■□□□ 1.22
SOCS3-201ENST00000330871 FTSJ3Q8IY81 847 aaKnown RBP22.66■■□□□ 1.22
SOCS3-201ENST00000330871 AFAP1Q8N556 730 aa22.66■■□□□ 1.22
SOCS3-201ENST00000330871 KANK1Q14678 1352 aa22.66■■□□□ 1.22
SOCS3-201ENST00000330871 HS1BP3Q53T59 392 aa22.66■■□□□ 1.22
SOCS3-201ENST00000330871 GAS2L2Q8NHY3 880 aa22.66■■□□□ 1.22
SOCS3-201ENST00000330871 RUNDC1Q96C34 613 aa22.66■■□□□ 1.22
SOCS3-201ENST00000330871 ZSCAN20P17040 1043 aaPredicted RBP22.65■■□□□ 1.22
SOCS3-201ENST00000330871 MCTP1Q6DN14 999 aa22.65■■□□□ 1.22
SOCS3-201ENST00000330871 ZKSCAN5Q9Y2L8 839 aa22.65■■□□□ 1.22
SOCS3-201ENST00000330871 SHROOM2Q13796 1616 aa22.65■■□□□ 1.22
SOCS3-201ENST00000330871 NEURL4Q96JN8 1562 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms