RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 TAF3Q5VWG9 929 aa10.53□□□□□ -0.72
SKA2-201ENST00000330137 RAB3GAP1Q15042 981 aa10.53□□□□□ -0.72
SKA2-201ENST00000330137 C22orf23Q9BZE7 217 aa10.53□□□□□ -0.72
SKA2-201ENST00000330137 DIP2BQ9P265 1576 aa10.52□□□□□ -0.72
SKA2-201ENST00000330137 NASPP49321 788 aaPredicted RBP10.52□□□□□ -0.73
SKA2-201ENST00000330137 ZNF326Q5BKZ1 582 aaKnown RBP10.52□□□□□ -0.73
SKA2-201ENST00000330137 ANKRD50Q9ULJ7 1429 aa10.52□□□□□ -0.73
SKA2-201ENST00000330137 CCDC94Q9BW85 323 aaPredicted RBP10.52□□□□□ -0.73
SKA2-201ENST00000330137 RWDD1Q9H446 243 aaPredicted RBP10.52□□□□□ -0.73
SKA2-201ENST00000330137 ERBINQ96RT1 1412 aa10.52□□□□□ -0.73
SKA2-201ENST00000330137 GOLGA6L22H0YM25 854 aa10.51□□□□□ -0.73
SKA2-201ENST00000330137 SYNMO15061 1565 aa10.51□□□□□ -0.73
SKA2-201ENST00000330137 CDK13Q14004 1512 aaKnown RBP10.51□□□□□ -0.73
SKA2-201ENST00000330137 RBM25P49756 843 aaKnown RBP10.51□□□□□ -0.73
SKA2-201ENST00000330137 ZNF445P59923 1031 aa10.51□□□□□ -0.73
SKA2-201ENST00000330137 TMF1P82094 1093 aa10.51□□□□□ -0.73
SKA2-201ENST00000330137 PDLIM2Q96JY6 352 aa10.51□□□□□ -0.73
SKA2-201ENST00000330137 KLHL40Q2TBA0 621 aa10.5□□□□□ -0.73
SKA2-201ENST00000330137 SASS6Q6UVJ0 657 aa10.5□□□□□ -0.73
SKA2-201ENST00000330137 GAS2L3Q86XJ1 694 aa10.5□□□□□ -0.73
SKA2-201ENST00000330137 LETM1O95202 739 aaPredicted RBP10.49□□□□□ -0.73
SKA2-201ENST00000330137 PPP2R1AP30153 589 aa10.49□□□□□ -0.73
SKA2-201ENST00000330137 TESK2Q96S53 571 aa10.49□□□□□ -0.73
SKA2-201ENST00000330137 PANK3Q9H999 370 aa10.49□□□□□ -0.73
SKA2-201ENST00000330137 CCDC141Q6ZP82 1450 aa10.49□□□□□ -0.73
SKA2-201ENST00000330137 WDR7Q9Y4E6 1490 aa10.49□□□□□ -0.73
SKA2-201ENST00000330137 ATP10BO94823 1461 aa10.49□□□□□ -0.73
SKA2-201ENST00000330137 PDE4CQ08493 712 aa10.48□□□□□ -0.73
SKA2-201ENST00000330137 TNPO1Q92973 898 aaKnown RBP10.48□□□□□ -0.73
SKA2-201ENST00000330137 RNF17Q9BXT8 1623 aaKnown RBP10.48□□□□□ -0.73
SKA2-201ENST00000330137 UQCRHLA0A096LP55 91 aa10.48□□□□□ -0.73
SKA2-201ENST00000330137 UQCRHP07919 91 aa10.48□□□□□ -0.73
SKA2-201ENST00000330137 FAM13BQ9NYF5 915 aa10.48□□□□□ -0.73
SKA2-201ENST00000330137 ASXL1Q8IXJ9 1541 aa10.48□□□□□ -0.73
SKA2-201ENST00000330137 YEATS2Q9ULM3 1422 aa10.48□□□□□ -0.73
SKA2-201ENST00000330137 HSP90AB1P08238 724 aaKnown RBP10.48□□□□□ -0.73
SKA2-201ENST00000330137 ARXQ96QS3 562 aa10.48□□□□□ -0.73
SKA2-201ENST00000330137 KANK1Q14678 1352 aa10.47□□□□□ -0.73
SKA2-201ENST00000330137 CDCA8Q53HL2 280 aa10.47□□□□□ -0.73
SKA2-201ENST00000330137 CC2D1BQ5T0F9 858 aaKnown RBP10.47□□□□□ -0.73
SKA2-201ENST00000330137 PDZRN3Q9UPQ7 1066 aa10.47□□□□□ -0.73
SKA2-201ENST00000330137 ZKSCAN5Q9Y2L8 839 aa10.47□□□□□ -0.73
SKA2-201ENST00000330137 NUP153P49790 1475 aaKnown RBP10.47□□□□□ -0.73
SKA2-201ENST00000330137 PLEKHD1A6NEE1 506 aa10.47□□□□□ -0.73
SKA2-201ENST00000330137 DISP3Q9P2K9 1392 aa10.46□□□□□ -0.73
SKA2-201ENST00000330137 R3HCC1Q9Y3T6 440 aaKnown RBP10.46□□□□□ -0.73
SKA2-201ENST00000330137 FAM135AQ9P2D6 1515 aa10.46□□□□□ -0.73
SKA2-201ENST00000330137 TROQ12816 1431 aaPredicted RBP10.46□□□□□ -0.74
SKA2-201ENST00000330137 BCAR3O75815 825 aa10.46□□□□□ -0.74
SKA2-201ENST00000330137 ZSCAN20P17040 1043 aaPredicted RBP10.46□□□□□ -0.74
SKA2-201ENST00000330137 KIF16BQ96L93 1317 aa10.46□□□□□ -0.74
SKA2-201ENST00000330137 NUP155O75694 1391 aa10.46□□□□□ -0.74
SKA2-201ENST00000330137 A0A0U1RQG5 324 aaPredicted RBP10.45□□□□□ -0.74
SKA2-201ENST00000330137 HMGN5P82970 282 aaKnown RBP10.45□□□□□ -0.74
SKA2-201ENST00000330137 PRIMPOLQ96LW4 560 aa10.45□□□□□ -0.74
SKA2-201ENST00000330137 CCDC39Q9UFE4 941 aa10.45□□□□□ -0.74
SKA2-201ENST00000330137 GTF2F1P35269 517 aaKnown RBP eCLIP10.45□□□□□ -0.741e-8■■■■■ 31.9
SKA2-201ENST00000330137 KNSTRNQ9Y448 316 aa10.45□□□□□ -0.74
SKA2-201ENST00000330137 REREQ9P2R6 1566 aa10.45□□□□□ -0.74
SKA2-201ENST00000330137 PIAS4Q8N2W9 510 aaPredicted RBP10.44□□□□□ -0.74
SKA2-201ENST00000330137 GPATCH8Q9UKJ3 1502 aaKnown RBP10.44□□□□□ -0.74
SKA2-201ENST00000330137 CT47B1P0C2W7 299 aaPredicted RBP10.43□□□□□ -0.74
SKA2-201ENST00000330137 HDAC1Q13547 482 aaPredicted RBP10.43□□□□□ -0.74
SKA2-201ENST00000330137 CANXP27824 592 aaKnown RBP10.43□□□□□ -0.74
SKA2-201ENST00000330137 MAGI2Q86UL8 1455 aa10.43□□□□□ -0.74
SKA2-201ENST00000330137 ATP10AO60312 1499 aa10.43□□□□□ -0.74
SKA2-201ENST00000330137 KLHL34Q8N239 644 aa10.43□□□□□ -0.74
SKA2-201ENST00000330137 MYRIPQ8NFW9 859 aa10.43□□□□□ -0.74
SKA2-201ENST00000330137 GLI2P10070 1586 aa10.42□□□□□ -0.74
SKA2-201ENST00000330137 ARHGEF5Q12774 1597 aa10.42□□□□□ -0.74
SKA2-201ENST00000330137 STAC3Q96MF2 364 aa10.42□□□□□ -0.74
SKA2-201ENST00000330137 CFAP44Q96MT7 982 aa10.42□□□□□ -0.74
SKA2-201ENST00000330137 COG6Q9Y2V7 657 aa10.42□□□□□ -0.74
SKA2-201ENST00000330137 CD109Q6YHK3 1445 aa10.42□□□□□ -0.74
SKA2-201ENST00000330137 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.42□□□□□ -0.74
SKA2-201ENST00000330137 PCDHB15Q9Y5E8 787 aa10.41□□□□□ -0.74
SKA2-201ENST00000330137 IQGAP1P46940 1657 aa10.41□□□□□ -0.74
SKA2-201ENST00000330137 MAP3K4Q9Y6R4 1608 aa10.41□□□□□ -0.74
SKA2-201ENST00000330137 ZNF644Q9H582 1327 aaPredicted RBP10.41□□□□□ -0.74
SKA2-201ENST00000330137 WDR63Q8IWG1 891 aa10.41□□□□□ -0.74
SKA2-201ENST00000330137 CFDP1Q9UEE9 299 aaPredicted RBP10.41□□□□□ -0.74
SKA2-201ENST00000330137 A2MP01023 1474 aa10.41□□□□□ -0.74
SKA2-201ENST00000330137 RARSP54136 660 aaKnown RBP10.4□□□□□ -0.74
SKA2-201ENST00000330137 CDC42BPAQ5VT25 1732 aa10.4□□□□□ -0.74
SKA2-201ENST00000330137 MYO5CQ9NQX4 1742 aa10.4□□□□□ -0.74
SKA2-201ENST00000330137 NUCB2P80303 420 aa10.4□□□□□ -0.74
SKA2-201ENST00000330137 PPP4R3BQ5MIZ7 849 aa10.4□□□□□ -0.74
SKA2-201ENST00000330137 DDX49Q9Y6V7 483 aaKnown RBP10.4□□□□□ -0.74
SKA2-201ENST00000330137 C9orf84Q5VXU9 1444 aa10.4□□□□□ -0.75
SKA2-201ENST00000330137 POLR3AO14802 1390 aaPredicted RBP10.4□□□□□ -0.75
SKA2-201ENST00000330137 K7ELQ4 463 aaPredicted RBP10.39□□□□□ -0.75
SKA2-201ENST00000330137 CCDC27Q2M243 656 aa10.39□□□□□ -0.75
SKA2-201ENST00000330137 PANK1Q8TE04 598 aa10.39□□□□□ -0.75
SKA2-201ENST00000330137 SPINK5Q9NQ38 1064 aaPredicted RBP10.39□□□□□ -0.75
SKA2-201ENST00000330137 KDM2AQ9Y2K7 1162 aa10.39□□□□□ -0.75
SKA2-201ENST00000330137 MFAP1P55081 439 aaKnown RBP10.39□□□□□ -0.75
SKA2-201ENST00000330137 UNC13BO14795 1591 aa10.38□□□□□ -0.75
SKA2-201ENST00000330137 APAF1O14727 1248 aa10.38□□□□□ -0.75
SKA2-201ENST00000330137 VGFO15240 615 aaPredicted RBP10.38□□□□□ -0.75
SKA2-201ENST00000330137 MVPQ14764 893 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms