RNA–Protein interactions for RNA: ENST00000330115.3

TMEM44-201, Transcript of transmembrane protein 44, humanhuman

TSL 1 (best) BASIC

Gene TMEM44, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM44-201ENST00000330115 CADPS2Q86UW7 1296 aa23.83■■□□□ 1.41
TMEM44-201ENST00000330115 ROCK2O75116 1388 aaKnown RBP23.81■■□□□ 1.4
TMEM44-201ENST00000330115 ASXL1Q8IXJ9 1541 aa23.81■■□□□ 1.4
TMEM44-201ENST00000330115 ATF3P18847 181 aa23.81■■□□□ 1.4
TMEM44-201ENST00000330115 DCCP43146 1447 aa23.81■■□□□ 1.4
TMEM44-201ENST00000330115 MST1RQ04912 1400 aa23.81■■□□□ 1.4
TMEM44-201ENST00000330115 NHSL1Q5SYE7 1610 aa23.81■■□□□ 1.4
TMEM44-201ENST00000330115 BRINP3Q76B58 766 aa23.8■■□□□ 1.4
TMEM44-201ENST00000330115 CARD11Q9BXL7 1154 aa23.78■■□□□ 1.4
TMEM44-201ENST00000330115 GPRASP1Q5JY77 1395 aa23.78■■□□□ 1.4
TMEM44-201ENST00000330115 ADGRL3Q9HAR2 1447 aa23.77■■□□□ 1.4
TMEM44-201ENST00000330115 TMEM132EQ6IEE7 984 aa23.76■■□□□ 1.39
TMEM44-201ENST00000330115 ADGRB1O14514 1584 aa23.73■■□□□ 1.39
TMEM44-201ENST00000330115 SPATA31A6Q5VVP1 1343 aa23.71■■□□□ 1.39
TMEM44-201ENST00000330115 PTCH1Q13635 1447 aa23.7■■□□□ 1.38
TMEM44-201ENST00000330115 ROBO2Q9HCK4 1378 aa23.7■■□□□ 1.38
TMEM44-201ENST00000330115 DDX17Q92841 729 aaKnown RBP23.7■■□□□ 1.38
TMEM44-201ENST00000330115 EIF4G2P78344 907 aaKnown RBP eCLIP23.69■■□□□ 1.38
TMEM44-201ENST00000330115 YTHDC2Q9H6S0 1430 aaKnown RBP23.68■■□□□ 1.38
TMEM44-201ENST00000330115 STK26Q9P289 416 aa23.68■■□□□ 1.38
TMEM44-201ENST00000330115 LRPPRCP42704 1394 aaKnown RBP23.66■■□□□ 1.38
TMEM44-201ENST00000330115 TRAK1Q9UPV9 953 aa23.66■■□□□ 1.38
TMEM44-201ENST00000330115 C1orf167Q5SNV9 1468 aa23.65■■□□□ 1.38
TMEM44-201ENST00000330115 ABCC11Q96J66 1382 aa23.65■■□□□ 1.38
TMEM44-201ENST00000330115 USP47Q96K76 1375 aa23.65■■□□□ 1.38
TMEM44-201ENST00000330115 HSPA5P11021 654 aaKnown RBP23.64■■□□□ 1.37
TMEM44-201ENST00000330115 KNDC1Q76NI1 1749 aa23.64■■□□□ 1.37
TMEM44-201ENST00000330115 MEX3CQ5U5Q3 659 aaKnown RBP23.63■■□□□ 1.37
TMEM44-201ENST00000330115 ARHGEF28Q8N1W1 1705 aaKnown RBP23.62■■□□□ 1.37
TMEM44-201ENST00000330115 NUTM2BA6NNL0 878 aaPredicted RBP23.62■■□□□ 1.37
TMEM44-201ENST00000330115 NUTM2EB1AL46 878 aaPredicted RBP23.62■■□□□ 1.37
TMEM44-201ENST00000330115 NUTM2AQ8IVF1 878 aaPredicted RBP23.62■■□□□ 1.37
TMEM44-201ENST00000330115 EIF3AQ14152 1382 aaKnown RBP23.62■■□□□ 1.37
TMEM44-201ENST00000330115 SIRT1Q96EB6 747 aa23.61■■□□□ 1.37
TMEM44-201ENST00000330115 PNPLA6Q8IY17 1366 aa23.6■■□□□ 1.37
TMEM44-201ENST00000330115 DLC1Q96QB1 1528 aa23.59■■□□□ 1.37
TMEM44-201ENST00000330115 ST20-MTHFSA0A0A6YYL1 179 aa23.59■■□□□ 1.37
TMEM44-201ENST00000330115 TECPR2O15040 1411 aa23.58■■□□□ 1.36
TMEM44-201ENST00000330115 ORAI2Q96SN7 254 aa23.57■■□□□ 1.36
TMEM44-201ENST00000330115 POGKQ9P215 609 aa23.57■■□□□ 1.36
TMEM44-201ENST00000330115 HIRIP3Q9BW71 556 aaPredicted RBP23.56■■□□□ 1.36
TMEM44-201ENST00000330115 CDC42BPGQ6DT37 1551 aa23.56■■□□□ 1.36
TMEM44-201ENST00000330115 CENPJQ9HC77 1338 aaPredicted RBP23.56■■□□□ 1.36
TMEM44-201ENST00000330115 ZNF772Q68DY9 489 aaPredicted RBP23.55■■□□□ 1.36
TMEM44-201ENST00000330115 PRAM1Q96QH2 718 aa23.55■■□□□ 1.36
TMEM44-201ENST00000330115 QRICH2Q9H0J4 1663 aa23.54■■□□□ 1.36
TMEM44-201ENST00000330115 LRRC59Q96AG4 307 aaKnown RBP23.54■■□□□ 1.36
TMEM44-201ENST00000330115 AFF2P51816 1311 aa23.54■■□□□ 1.36
TMEM44-201ENST00000330115 SLC24A1O60721 1099 aa23.53■■□□□ 1.36
TMEM44-201ENST00000330115 WAPLQ7Z5K2 1190 aa23.53■■□□□ 1.36
TMEM44-201ENST00000330115 SOS2Q07890 1332 aaPredicted RBP23.5■■□□□ 1.35
TMEM44-201ENST00000330115 PLEKHH1Q9ULM0 1364 aa23.5■■□□□ 1.35
TMEM44-201ENST00000330115 ZNF316A6NFI3 1004 aaPredicted RBP23.49■■□□□ 1.35
TMEM44-201ENST00000330115 SAFB2Q14151 953 aaKnown RBP eCLIP23.49■■□□□ 1.35
TMEM44-201ENST00000330115 COL22A1Q8NFW1 1626 aaPredicted RBP23.48■■□□□ 1.35
TMEM44-201ENST00000330115 TESK2Q96S53 571 aa23.48■■□□□ 1.35
TMEM44-201ENST00000330115 C8orf37Q96NL8 207 aa23.47■■□□□ 1.35
TMEM44-201ENST00000330115 SBNO2Q9Y2G9 1366 aa23.47■■□□□ 1.35
TMEM44-201ENST00000330115 FMN2Q9NZ56 1722 aa23.45■■□□□ 1.34
TMEM44-201ENST00000330115 PXDNQ92626 1479 aa23.45■■□□□ 1.34
TMEM44-201ENST00000330115 CDK12Q9NYV4 1490 aaPredicted RBP23.45■■□□□ 1.34
TMEM44-201ENST00000330115 RXRBP28702 533 aa23.45■■□□□ 1.34
TMEM44-201ENST00000330115 TMF1P82094 1093 aa23.45■■□□□ 1.34
TMEM44-201ENST00000330115 RGS12O14924 1447 aa23.44■■□□□ 1.34
TMEM44-201ENST00000330115 MINK1Q8N4C8 1332 aaPredicted RBP23.44■■□□□ 1.34
TMEM44-201ENST00000330115 ADAMTS2O95450 1211 aa23.43■■□□□ 1.34
TMEM44-201ENST00000330115 UPF1Q92900 1129 aaKnown RBP eCLIP23.43■■□□□ 1.34
TMEM44-201ENST00000330115 NUTM2FA1L443 756 aa23.41■■□□□ 1.34
TMEM44-201ENST00000330115 EVC2Q86UK5 1308 aa23.4■■□□□ 1.34
TMEM44-201ENST00000330115 XPCQ01831 940 aaPredicted RBP23.4■■□□□ 1.34
TMEM44-201ENST00000330115 CDCA8Q53HL2 280 aa23.4■■□□□ 1.34
TMEM44-201ENST00000330115 ESCO1Q5FWF5 840 aa23.4■■□□□ 1.34
TMEM44-201ENST00000330115 RGPD8O14715 1765 aaPredicted RBP23.4■■□□□ 1.34
TMEM44-201ENST00000330115 MARF1Q9Y4F3 1742 aaKnown RBP23.39■■□□□ 1.34
TMEM44-201ENST00000330115 C11orf95C9JLR9 678 aaPredicted RBP23.38■■□□□ 1.33
TMEM44-201ENST00000330115 QTRT2Q9H974 415 aaKnown RBP23.37■■□□□ 1.33
TMEM44-201ENST00000330115 ADGRB2O60241 1585 aa23.36■■□□□ 1.33
TMEM44-201ENST00000330115 PUS7Q96PZ0 661 aaKnown RBP23.36■■□□□ 1.33
TMEM44-201ENST00000330115 NPHP3Q7Z494 1330 aa23.35■■□□□ 1.33
TMEM44-201ENST00000330115 WASLO00401 505 aaPredicted RBP23.35■■□□□ 1.33
TMEM44-201ENST00000330115 FOXO3O43524 673 aa23.35■■□□□ 1.33
TMEM44-201ENST00000330115 NGLY1Q96IV0 654 aa23.35■■□□□ 1.33
TMEM44-201ENST00000330115 CDK19Q9BWU1 502 aa23.35■■□□□ 1.33
TMEM44-201ENST00000330115 KIF1AQ12756 1690 aa23.35■■□□□ 1.33
TMEM44-201ENST00000330115 TULP4Q9NRJ4 1543 aa23.34■■□□□ 1.33
TMEM44-201ENST00000330115 CCDC7Q96M83 1385 aa23.33■■□□□ 1.33
TMEM44-201ENST00000330115 RBM6P78332 1123 aaKnown RBP23.33■■□□□ 1.33
TMEM44-201ENST00000330115 KIF7Q2M1P5 1343 aa23.33■■□□□ 1.32
TMEM44-201ENST00000330115 SRPK2P78362 688 aaKnown RBP23.32■■□□□ 1.32
TMEM44-201ENST00000330115 POLR3GLQ9BT43 218 aa23.32■■□□□ 1.32
TMEM44-201ENST00000330115 WASHC2AQ641Q2 1341 aa23.32■■□□□ 1.32
TMEM44-201ENST00000330115 USP32Q8NFA0 1604 aa23.3■■□□□ 1.32
TMEM44-201ENST00000330115 CABP2Q9NPB3 220 aa23.3■■□□□ 1.32
TMEM44-201ENST00000330115 USP21Q9UK80 565 aa23.3■■□□□ 1.32
TMEM44-201ENST00000330115 ATRNO75882 1429 aa23.3■■□□□ 1.32
TMEM44-201ENST00000330115 FNBP4Q8N3X1 1017 aaPredicted RBP23.29■■□□□ 1.32
TMEM44-201ENST00000330115 BCL9LQ86UU0 1499 aa23.28■■□□□ 1.32
TMEM44-201ENST00000330115 ABCA3Q99758 1704 aa23.25■■□□□ 1.31
TMEM44-201ENST00000330115 NUDT16Q96DE0 195 aaKnown RBP23.25■■□□□ 1.31
TMEM44-201ENST00000330115 ATAD2Q6PL18 1390 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms