RNA–Protein interactions for RNA: ENST00000329305.6

TPM2-201, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM2, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-201ENST00000329305 PLEKHH1Q9ULM0 1364 aa23.58■■□□□ 1.37
TPM2-201ENST00000329305 NBPF1Q3BBV0 1214 aa23.57■■□□□ 1.36
TPM2-201ENST00000329305 ROCK2O75116 1388 aaKnown RBP23.55■■□□□ 1.36
TPM2-201ENST00000329305 SAFB2Q14151 953 aaKnown RBP eCLIP23.55■■□□□ 1.36
TPM2-201ENST00000329305 TIMELESSQ9UNS1 1208 aa23.55■■□□□ 1.36
TPM2-201ENST00000329305 MST1RQ04912 1400 aa23.53■■□□□ 1.36
TPM2-201ENST00000329305 CDC42BPGQ6DT37 1551 aa23.52■■□□□ 1.36
TPM2-201ENST00000329305 TRPM1Q7Z4N2 1603 aa23.52■■□□□ 1.36
TPM2-201ENST00000329305 NBPF8Q3BBV2 869 aa23.52■■□□□ 1.36
TPM2-201ENST00000329305 ROBO1Q9Y6N7 1651 aa23.51■■□□□ 1.35
TPM2-201ENST00000329305 HSPA1LP34931 641 aa23.51■■□□□ 1.35
TPM2-201ENST00000329305 C1orf167Q5SNV9 1468 aa23.48■■□□□ 1.35
TPM2-201ENST00000329305 ARHGEF28Q8N1W1 1705 aaKnown RBP23.47■■□□□ 1.35
TPM2-201ENST00000329305 BRINP3Q76B58 766 aa23.47■■□□□ 1.35
TPM2-201ENST00000329305 RALGAPBQ86X10 1494 aa23.46■■□□□ 1.35
TPM2-201ENST00000329305 MINK1Q8N4C8 1332 aaPredicted RBP23.46■■□□□ 1.35
TPM2-201ENST00000329305 EIF3AQ14152 1382 aaKnown RBP23.45■■□□□ 1.34
TPM2-201ENST00000329305 GPRASP1Q5JY77 1395 aa23.45■■□□□ 1.34
TPM2-201ENST00000329305 CARD11Q9BXL7 1154 aa23.45■■□□□ 1.34
TPM2-201ENST00000329305 CENPJQ9HC77 1338 aaPredicted RBP23.44■■□□□ 1.34
TPM2-201ENST00000329305 HIRIP3Q9BW71 556 aaPredicted RBP23.44■■□□□ 1.34
TPM2-201ENST00000329305 NUTM2FA1L443 756 aa23.43■■□□□ 1.34
TPM2-201ENST00000329305 ADGRB2O60241 1585 aa23.43■■□□□ 1.34
TPM2-201ENST00000329305 ESCO1Q5FWF5 840 aa23.41■■□□□ 1.34
TPM2-201ENST00000329305 ORAI2Q96SN7 254 aa23.4■■□□□ 1.34
TPM2-201ENST00000329305 FMN2Q9NZ56 1722 aa23.39■■□□□ 1.34
TPM2-201ENST00000329305 WASLO00401 505 aaPredicted RBP23.39■■□□□ 1.33
TPM2-201ENST00000329305 AHDC1Q5TGY3 1603 aaPredicted RBP23.37■■□□□ 1.33
TPM2-201ENST00000329305 ANKARQ7Z5J8 1434 aa23.37■■□□□ 1.33
TPM2-201ENST00000329305 PHLPP1O60346 1717 aa23.36■■□□□ 1.33
TPM2-201ENST00000329305 TULP4Q9NRJ4 1543 aa23.33■■□□□ 1.33
TPM2-201ENST00000329305 NPHP3Q7Z494 1330 aa23.33■■□□□ 1.32
TPM2-201ENST00000329305 CDK19Q9BWU1 502 aa23.32■■□□□ 1.32
TPM2-201ENST00000329305 QRICH2Q9H0J4 1663 aa23.32■■□□□ 1.32
TPM2-201ENST00000329305 NHSL1Q5SYE7 1610 aa23.31■■□□□ 1.32
TPM2-201ENST00000329305 PHF8Q9UPP1 1060 aa23.31■■□□□ 1.32
TPM2-201ENST00000329305 COL16A1Q07092 1604 aaPredicted RBP23.3■■□□□ 1.32
TPM2-201ENST00000329305 SRPK2P78362 688 aaKnown RBP23.3■■□□□ 1.32
TPM2-201ENST00000329305 DDX17Q92841 729 aaKnown RBP23.3■■□□□ 1.32
TPM2-201ENST00000329305 EVC2Q86UK5 1308 aa23.3■■□□□ 1.32
TPM2-201ENST00000329305 JCADQ9P266 1359 aa23.29■■□□□ 1.32
TPM2-201ENST00000329305 KIF1AQ12756 1690 aa23.29■■□□□ 1.32
TPM2-201ENST00000329305 FOXO3O43524 673 aa23.29■■□□□ 1.32
TPM2-201ENST00000329305 LRRC59Q96AG4 307 aaKnown RBP23.29■■□□□ 1.32
TPM2-201ENST00000329305 NUDT16Q96DE0 195 aaKnown RBP23.28■■□□□ 1.32
TPM2-201ENST00000329305 PRR36Q9H6K5 1346 aa23.28■■□□□ 1.32
TPM2-201ENST00000329305 SOS2Q07890 1332 aaPredicted RBP23.26■■□□□ 1.31
TPM2-201ENST00000329305 USP32Q8NFA0 1604 aa23.26■■□□□ 1.31
TPM2-201ENST00000329305 SBNO2Q9Y2G9 1366 aa23.26■■□□□ 1.31
TPM2-201ENST00000329305 ATP7BP35670 1465 aa23.25■■□□□ 1.31
TPM2-201ENST00000329305 PMFBP1Q8TBY8 1022 aa23.25■■□□□ 1.31
TPM2-201ENST00000329305 CCDC61Q9Y6R9 512 aa23.24■■□□□ 1.31
TPM2-201ENST00000329305 USP47Q96K76 1375 aa23.24■■□□□ 1.31
TPM2-201ENST00000329305 SLC24A1O60721 1099 aa23.23■■□□□ 1.31
TPM2-201ENST00000329305 CABP2Q9NPB3 220 aa23.23■■□□□ 1.31
TPM2-201ENST00000329305 RGPD8O14715 1765 aaPredicted RBP23.22■■□□□ 1.31
TPM2-201ENST00000329305 XPCQ01831 940 aaPredicted RBP23.22■■□□□ 1.31
TPM2-201ENST00000329305 PSME1Q06323 249 aa23.22■■□□□ 1.31
TPM2-201ENST00000329305 NGDNQ8NEJ9 315 aaKnown RBP23.22■■□□□ 1.31
TPM2-201ENST00000329305 ST20-MTHFSA0A0A6YYL1 179 aa23.21■■□□□ 1.31
TPM2-201ENST00000329305 KRT28Q7Z3Y7 464 aa23.21■■□□□ 1.31
TPM2-201ENST00000329305 PXDNQ92626 1479 aa23.21■■□□□ 1.31
TPM2-201ENST00000329305 ITSN1Q15811 1721 aa23.21■■□□□ 1.31
TPM2-201ENST00000329305 SPATA31A6Q5VVP1 1343 aa23.2■■□□□ 1.3
TPM2-201ENST00000329305 ATAD2Q6PL18 1390 aa23.17■■□□□ 1.3
TPM2-201ENST00000329305 SHPRHQ149N8 1683 aa23.17■■□□□ 1.3
TPM2-201ENST00000329305 PPIP5K1Q6PFW1 1433 aa23.16■■□□□ 1.3
TPM2-201ENST00000329305 PNPLA6Q8IY17 1366 aa23.16■■□□□ 1.3
TPM2-201ENST00000329305 MED1Q15648 1581 aaPredicted RBP23.15■■□□□ 1.3
TPM2-201ENST00000329305 PLEKHG3A1L390 1219 aa23.15■■□□□ 1.3
TPM2-201ENST00000329305 TOPAZ1Q8N9V7 1692 aa23.15■■□□□ 1.3
TPM2-201ENST00000329305 TESK2Q96S53 571 aa23.14■■□□□ 1.29
TPM2-201ENST00000329305 SBNO1A3KN83 1393 aa23.14■■□□□ 1.29
TPM2-201ENST00000329305 ACEP12821 1306 aa23.13■■□□□ 1.29
TPM2-201ENST00000329305 SPATA31A3Q5VYP0 1347 aa23.13■■□□□ 1.29
TPM2-201ENST00000329305 POLR3AO14802 1390 aaPredicted RBP23.13■■□□□ 1.29
TPM2-201ENST00000329305 EIF4G2P78344 907 aaKnown RBP eCLIP23.12■■□□□ 1.29
TPM2-201ENST00000329305 TMF1P82094 1093 aa23.12■■□□□ 1.29
TPM2-201ENST00000329305 TNS3Q68CZ2 1445 aa23.12■■□□□ 1.29
TPM2-201ENST00000329305 CABP1Q9NZU7 370 aa23.12■■□□□ 1.29
TPM2-201ENST00000329305 NUTM2BA6NNL0 878 aaPredicted RBP23.11■■□□□ 1.29
TPM2-201ENST00000329305 NUTM2EB1AL46 878 aaPredicted RBP23.11■■□□□ 1.29
TPM2-201ENST00000329305 LMOD2Q6P5Q4 547 aa23.11■■□□□ 1.29
TPM2-201ENST00000329305 NUTM2AQ8IVF1 878 aaPredicted RBP23.11■■□□□ 1.29
TPM2-201ENST00000329305 PHF23Q9BUL5 403 aaPredicted RBP23.11■■□□□ 1.29
TPM2-201ENST00000329305 DISP3Q9P2K9 1392 aa23.11■■□□□ 1.29
TPM2-201ENST00000329305 MEX3CQ5U5Q3 659 aaKnown RBP23.1■■□□□ 1.29
TPM2-201ENST00000329305 PUS7Q96PZ0 661 aaKnown RBP23.1■■□□□ 1.29
TPM2-201ENST00000329305 ARHGEF10O15013 1369 aa23.1■■□□□ 1.29
TPM2-201ENST00000329305 PAK3O75914 559 aaPredicted RBP23.09■■□□□ 1.29
TPM2-201ENST00000329305 CDCA8Q53HL2 280 aa23.08■■□□□ 1.29
TPM2-201ENST00000329305 TMC1Q8TDI8 760 aa23.06■■□□□ 1.28
TPM2-201ENST00000329305 LRP6O75581 1613 aa23.05■■□□□ 1.28
TPM2-201ENST00000329305 COL22A1Q8NFW1 1626 aaPredicted RBP23.05■■□□□ 1.28
TPM2-201ENST00000329305 BRD4O60885 1362 aaPredicted RBP23.04■■□□□ 1.28
TPM2-201ENST00000329305 HAP1P54257 671 aaPredicted RBP23.04■■□□□ 1.28
TPM2-201ENST00000329305 ZNF692Q9BU19 519 aaPredicted RBP23.04■■□□□ 1.28
TPM2-201ENST00000329305 TRPM3Q9HCF6 1732 aaPredicted RBP23.03■■□□□ 1.28
TPM2-201ENST00000329305 HSPA5P11021 654 aaKnown RBP23.03■■□□□ 1.28
TPM2-201ENST00000329305 NINLQ9Y2I6 1382 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms