RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 BICD2Q8TD16 824 aa6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 TRIM5Q9C035 493 aa6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 HOOK1Q9UJC3 728 aaKnown RBP6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 SLC4A10Q6U841 1118 aa6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 ANKRD30AQ9BXX3 1397 aa6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 NINLQ9Y2I6 1382 aa6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 RNF214Q8ND24 703 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 MCM5P33992 734 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 CREBRFQ8IUR6 639 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 CCDC18Q5T9S5 1454 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 NUP155O75694 1391 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 FAM69CQ0P6D2 419 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 OSCARQ8IYS5 282 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 SMG6Q86US8 1419 aaKnown RBP6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 AXDND1Q5T1B0 1012 aaPredicted RBP6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 FAM184AQ8NB25 1140 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 TERF2IPQ9NYB0 399 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 CIZ1Q9ULV3 898 aaPredicted RBP6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 ATF3P18847 181 aa6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 CCDC73Q6ZRK6 1079 aa6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 NOL10Q9BSC4 688 aaKnown RBP6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 USP47Q96K76 1375 aa6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 FOXD4L6Q3SYB3 417 aaPredicted RBP6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 FOXD4L3Q6VB84 417 aaPredicted RBP6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 STK11IPQ8N1F8 1099 aa6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 TIGD1Q96MW7 591 aa6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 HNRNPMP52272 730 aaKnown RBP eCLIP6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 SAMD1Q6SPF0 538 aaPredicted RBP6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 FAM107BQ9H098 131 aa6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 KIF2AO00139 706 aaPredicted RBP6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 PES1O00541 588 aaKnown RBP6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 ROCK1Q13464 1354 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 C11orf95C9JLR9 678 aaPredicted RBP6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 RABEP1Q15276 862 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 CAGE1Q8TC20 777 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 ZRSR2Q15696 482 aaKnown RBP6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 DDX11Q96FC9 970 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 CDC45O75419 566 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 ANKRD45Q5TZF3 282 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 INTS3Q68E01 1043 aaKnown RBP6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 WWC1Q8IX03 1113 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 COG6Q9Y2V7 657 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 AKNAQ7Z591 1439 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 CCDC146Q8IYE0 955 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 GTPBP4Q9BZE4 634 aaKnown RBP6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 FBXO3Q9UK99 471 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 LMOD3Q0VAK6 560 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 VPS37DQ86XT2 251 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 DYDC1Q8WWB3 177 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 CBX1P83916 185 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 BRD4O60885 1362 aaPredicted RBP6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 CLCN1P35523 988 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 PIP4K2BP78356 416 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 TRAK1Q9UPV9 953 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 MCM4P33991 863 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 KANK4Q5T7N3 995 aaPredicted RBP6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 CCDC192P0DO97 292 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 ZKSCAN1P17029 563 aaPredicted RBP6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 SF3B2Q13435 895 aaKnown RBP6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 WASHC2AQ641Q2 1341 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 PDIA4P13667 645 aaKnown RBP6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 L3MBTL2Q969R5 705 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 VPS37CA5D8V6 355 aaPredicted RBP6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 NEFHP12036 1026 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 CT47B1P0C2W7 299 aaPredicted RBP6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 DZIP1LQ8IYY4 767 aaKnown RBP6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 MYO6Q9UM54 1294 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 SMC3Q9UQE7 1217 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 GOLGA6L10A6NI86 522 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 RUFY2Q8WXA3 655 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 MPHOSPH9Q99550 1183 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 NBPF1Q3BBV0 1214 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 PPP4R3BQ5MIZ7 849 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 CCDC94Q9BW85 323 aaPredicted RBP6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 CCDC7Q96M83 1385 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 PLCD4Q9BRC7 762 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 IQCEQ6IPM2 695 aa6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 PRIMPOLQ96LW4 560 aa6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 PRPF40AO75400 957 aaKnown RBP6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 MINK1Q8N4C8 1332 aaPredicted RBP6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 TTC5Q8N0Z6 440 aa6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 AMOTL1Q8IY63 956 aa6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 MCM2P49736 904 aa6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 SMAP1Q8IYB5 467 aaPredicted RBP6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 ANO2Q9NQ90 1003 aa6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 GPATCH11Q8N954 259 aa6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 SMC2O95347 1197 aa6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 GTF2A1P52655 376 aaPredicted RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 TXLNBQ8N3L3 684 aa6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 NUTM2BA6NNL0 878 aaPredicted RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 NUTM2EB1AL46 878 aaPredicted RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 NUTM2AQ8IVF1 878 aaPredicted RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 RBM33Q96EV2 1170 aaKnown RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 TMCO3Q6UWJ1 677 aa6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 SPC24Q8NBT2 197 aa6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 KINO60870 393 aaKnown RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 OLFM4Q6UX06 510 aa6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 BCL11BQ9C0K0 894 aaPredicted RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 SHTN1A0MZ66 631 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms