RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 TSPYL4Q9UJ04 414 aa18.25■□□□□ 0.51
SYNGR1-203ENST00000328933 SULT6B1Q6IMI4 303 aa18.24■□□□□ 0.51
SYNGR1-203ENST00000328933 KCNH5Q8NCM2 988 aa18.23■□□□□ 0.51
SYNGR1-203ENST00000328933 SMG6Q86US8 1419 aaKnown RBP18.23■□□□□ 0.51
SYNGR1-203ENST00000328933 WDR97A6NE52 1622 aa18.22■□□□□ 0.51
SYNGR1-203ENST00000328933 DCAF8L1A6NGE4 600 aa18.21■□□□□ 0.51
SYNGR1-203ENST00000328933 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
SYNGR1-203ENST00000328933 ATP10AO60312 1499 aa18.21■□□□□ 0.51
SYNGR1-203ENST00000328933 PRKAR2BP31323 418 aa18.21■□□□□ 0.51
SYNGR1-203ENST00000328933 UHRF1BP1Q6BDS2 1440 aa18.2■□□□□ 0.5
SYNGR1-203ENST00000328933 NAP1L2Q9ULW6 460 aaPredicted RBP18.2■□□□□ 0.5
SYNGR1-203ENST00000328933 B4GALNT3Q6L9W6 998 aa18.2■□□□□ 0.5
SYNGR1-203ENST00000328933 C14orf93Q9H972 538 aaKnown RBP18.2■□□□□ 0.5
SYNGR1-203ENST00000328933 LMTK3Q96Q04 1460 aa18.2■□□□□ 0.5
SYNGR1-203ENST00000328933 GAS2L2Q8NHY3 880 aa18.2■□□□□ 0.5
SYNGR1-203ENST00000328933 AIMP1Q12904 312 aaKnown RBP18.19■□□□□ 0.5
SYNGR1-203ENST00000328933 RUNDC1Q96C34 613 aa18.19■□□□□ 0.5
SYNGR1-203ENST00000328933 WASHC2AQ641Q2 1341 aa18.18■□□□□ 0.5
SYNGR1-203ENST00000328933 C19orf44Q9H6X5 657 aa18.18■□□□□ 0.5
SYNGR1-203ENST00000328933 C9orf78Q9NZ63 289 aaPredicted RBP18.18■□□□□ 0.5
SYNGR1-203ENST00000328933 KCNA6P17658 529 aa18.17■□□□□ 0.5
SYNGR1-203ENST00000328933 DUOX2Q9NRD8 1548 aa18.17■□□□□ 0.5
SYNGR1-203ENST00000328933 FAM177BA6PVY3 158 aa18.17■□□□□ 0.5
SYNGR1-203ENST00000328933 DDX58O95786 925 aaKnown RBP18.17■□□□□ 0.5
SYNGR1-203ENST00000328933 FKBP5Q13451 457 aaPredicted RBP18.17■□□□□ 0.5
SYNGR1-203ENST00000328933 SPG7Q9UQ90 795 aa18.17■□□□□ 0.5
SYNGR1-203ENST00000328933 RIMS2Q9UQ26 1411 aa18.17■□□□□ 0.5
SYNGR1-203ENST00000328933 LRPPRCP42704 1394 aaKnown RBP18.17■□□□□ 0.5
SYNGR1-203ENST00000328933 HMMRO75330 724 aa18.16■□□□□ 0.5
SYNGR1-203ENST00000328933 CABP4P57796 275 aa18.16■□□□□ 0.5
SYNGR1-203ENST00000328933 NME9Q86XW9 330 aa18.16■□□□□ 0.5
SYNGR1-203ENST00000328933 CNTLNQ9NXG0 1405 aa18.16■□□□□ 0.5
SYNGR1-203ENST00000328933 CHRNA2Q15822 529 aa18.15■□□□□ 0.5
SYNGR1-203ENST00000328933 GNAI1P63096 354 aa18.14■□□□□ 0.49
SYNGR1-203ENST00000328933 NPHP3Q7Z494 1330 aa18.14■□□□□ 0.49
SYNGR1-203ENST00000328933 E9PSI1 815 aa18.13■□□□□ 0.49
SYNGR1-203ENST00000328933 C8orf37Q96NL8 207 aa18.13■□□□□ 0.49
SYNGR1-203ENST00000328933 NEO1Q92859 1461 aa18.13■□□□□ 0.49
SYNGR1-203ENST00000328933 PPP2R1AP30153 589 aa18.12■□□□□ 0.49
SYNGR1-203ENST00000328933 CHD1O14646 1710 aa18.12■□□□□ 0.49
SYNGR1-203ENST00000328933 RIC3Q7Z5B4 369 aa18.12■□□□□ 0.49
SYNGR1-203ENST00000328933 PTPRKQ15262 1439 aa18.11■□□□□ 0.49
SYNGR1-203ENST00000328933 TCP11L2Q8N4U5 519 aa18.11■□□□□ 0.49
SYNGR1-203ENST00000328933 ITSN2Q9NZM3 1697 aa18.1■□□□□ 0.49
SYNGR1-203ENST00000328933 PPP4R2Q9NY27 417 aa18.1■□□□□ 0.49
SYNGR1-203ENST00000328933 ACEP12821 1306 aa18.1■□□□□ 0.49
SYNGR1-203ENST00000328933 YEATS2Q9ULM3 1422 aa18.1■□□□□ 0.49
SYNGR1-203ENST00000328933 ADAMTS8Q9UP79 889 aa18.09■□□□□ 0.49
SYNGR1-203ENST00000328933 TBX22Q9Y458 520 aa18.09■□□□□ 0.49
SYNGR1-203ENST00000328933 RWDD1Q9H446 243 aaPredicted RBP18.09■□□□□ 0.49
SYNGR1-203ENST00000328933 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.08■□□□□ 0.49
SYNGR1-203ENST00000328933 USHBP1Q8N6Y0 703 aa18.08■□□□□ 0.48
SYNGR1-203ENST00000328933 EIF5BO60841 1220 aaKnown RBP18.07■□□□□ 0.48
SYNGR1-203ENST00000328933 KAT6BQ8WYB5 2073 aa18.07■□□□□ 0.48
SYNGR1-203ENST00000328933 CABLES1Q8TDN4 633 aa18.07■□□□□ 0.48
SYNGR1-203ENST00000328933 EXOC5O00471 708 aa18.06■□□□□ 0.48
SYNGR1-203ENST00000328933 NSD3Q9BZ95 1437 aa18.06■□□□□ 0.48
SYNGR1-203ENST00000328933 HSP90AB1P08238 724 aaKnown RBP18.06■□□□□ 0.48
SYNGR1-203ENST00000328933 TSPOAP1O95153 1857 aa18.06■□□□□ 0.48
SYNGR1-203ENST00000328933 KIAA1211Q6ZU35 1233 aa18.06■□□□□ 0.48
SYNGR1-203ENST00000328933 PTCD1O75127 700 aaKnown RBP18.05■□□□□ 0.48
SYNGR1-203ENST00000328933 ZKSCAN2Q63HK3 967 aa18.05■□□□□ 0.48
SYNGR1-203ENST00000328933 GPATCH3Q96I76 525 aa18.05■□□□□ 0.48
SYNGR1-203ENST00000328933 FBXW7Q969H0 707 aa18.04■□□□□ 0.48
SYNGR1-203ENST00000328933 TULP1O00294 542 aaPredicted RBP18.04■□□□□ 0.48
SYNGR1-203ENST00000328933 LRRC59Q96AG4 307 aaKnown RBP18.04■□□□□ 0.48
SYNGR1-203ENST00000328933 TRIM6-TRIM34B2RNG4 842 aa18.03■□□□□ 0.48
SYNGR1-203ENST00000328933 ERCC6L2Q5T890 1561 aa18.03■□□□□ 0.48
SYNGR1-203ENST00000328933 VPS37DQ86XT2 251 aa18.03■□□□□ 0.48
SYNGR1-203ENST00000328933 EMILIN1Q9Y6C2 1016 aa18.03■□□□□ 0.48
SYNGR1-203ENST00000328933 ATP7AQ04656 1500 aa18.02■□□□□ 0.48
SYNGR1-203ENST00000328933 MPRIPQ6WCQ1 1025 aa18.02■□□□□ 0.48
SYNGR1-203ENST00000328933 ZFYVE16Q7Z3T8 1539 aa18.01■□□□□ 0.47
SYNGR1-203ENST00000328933 API5Q9BZZ5 524 aaKnown RBP18.01■□□□□ 0.47
SYNGR1-203ENST00000328933 BECN1Q14457 450 aa18■□□□□ 0.47
SYNGR1-203ENST00000328933 TPRNQ4KMQ1 711 aa18■□□□□ 0.47
SYNGR1-203ENST00000328933 KIF6Q6ZMV9 814 aa18■□□□□ 0.47
SYNGR1-203ENST00000328933 HDGFL1Q5TGJ6 251 aa18■□□□□ 0.47
SYNGR1-203ENST00000328933 PLIN1O60240 522 aa17.99■□□□□ 0.47
SYNGR1-203ENST00000328933 ZNF428Q96B54 188 aa17.99■□□□□ 0.47
SYNGR1-203ENST00000328933 TMOD3Q9NYL9 352 aa17.99■□□□□ 0.47
SYNGR1-203ENST00000328933 TOMM22Q9NS69 142 aa17.98■□□□□ 0.47
SYNGR1-203ENST00000328933 COG6Q9Y2V7 657 aa17.98■□□□□ 0.47
SYNGR1-203ENST00000328933 MCCP23508 829 aa17.96■□□□□ 0.47
SYNGR1-203ENST00000328933 LTKP29376 864 aa17.96■□□□□ 0.47
SYNGR1-203ENST00000328933 CFAP65Q6ZU64 1925 aaKnown RBP17.96■□□□□ 0.47
SYNGR1-203ENST00000328933 MYL6BP14649 208 aa17.96■□□□□ 0.47
SYNGR1-203ENST00000328933 CCDC30Q5VVM6 783 aa17.96■□□□□ 0.47
SYNGR1-203ENST00000328933 ORAI2Q96SN7 254 aa17.96■□□□□ 0.47
SYNGR1-203ENST00000328933 BICDL1Q6ZP65 573 aa17.95■□□□□ 0.46
SYNGR1-203ENST00000328933 SCAF11Q99590 1463 aaKnown RBP17.95■□□□□ 0.46
SYNGR1-203ENST00000328933 FBLN1P23142 703 aa17.95■□□□□ 0.46
SYNGR1-203ENST00000328933 SLAIN2Q9P270 581 aa17.95■□□□□ 0.46
SYNGR1-203ENST00000328933 PNISRQ8TF01 805 aaKnown RBP17.95■□□□□ 0.46
SYNGR1-203ENST00000328933 RPRD2Q5VT52 1461 aaKnown RBP17.95■□□□□ 0.46
SYNGR1-203ENST00000328933 BTBD11A6QL63 1104 aa17.95■□□□□ 0.46
SYNGR1-203ENST00000328933 BCL11BQ9C0K0 894 aaPredicted RBP17.94■□□□□ 0.46
SYNGR1-203ENST00000328933 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.94■□□□□ 0.46
SYNGR1-203ENST00000328933 ANKRD24Q8TF21 1146 aa17.94■□□□□ 0.46
SYNGR1-203ENST00000328933 G3BP1Q13283 466 aaKnown RBP eCLIP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms