RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 STK31Q9BXU1 1019 aa20.24■□□□□ 0.83
SYNM-201ENST00000328642 MIS18AQ9NYP9 233 aa20.23■□□□□ 0.83
SYNM-201ENST00000328642 NUDT16Q96DE0 195 aaKnown RBP20.23■□□□□ 0.83
SYNM-201ENST00000328642 CALD1Q05682 793 aaKnown RBP20.23■□□□□ 0.83
SYNM-201ENST00000328642 ABTB2Q8N961 1025 aa20.22■□□□□ 0.83
SYNM-201ENST00000328642 DENND4BO75064 1496 aaPredicted RBP20.22■□□□□ 0.83
SYNM-201ENST00000328642 SLFN5Q08AF3 891 aa20.22■□□□□ 0.83
SYNM-201ENST00000328642 GZF1Q9H116 711 aaPredicted RBP20.22■□□□□ 0.83
SYNM-201ENST00000328642 HSP90AB1P08238 724 aaKnown RBP20.21■□□□□ 0.83
SYNM-201ENST00000328642 RALGAPBQ86X10 1494 aa20.21■□□□□ 0.83
SYNM-201ENST00000328642 MBD5Q9P267 1494 aa20.21■□□□□ 0.83
SYNM-201ENST00000328642 ABCC2Q92887 1545 aa20.21■□□□□ 0.83
SYNM-201ENST00000328642 ESCO1Q5FWF5 840 aa20.2■□□□□ 0.82
SYNM-201ENST00000328642 RTEL1-TNFRSF6BF6WH68 1400 aa20.2■□□□□ 0.82
SYNM-201ENST00000328642 A2MP01023 1474 aa20.2■□□□□ 0.82
SYNM-201ENST00000328642 NOL8Q76FK4 1167 aaKnown RBP20.19■□□□□ 0.82
SYNM-201ENST00000328642 FAM161AQ3B820 660 aa20.19■□□□□ 0.82
SYNM-201ENST00000328642 CCDC9Q9Y3X0 531 aaKnown RBP20.19■□□□□ 0.82
SYNM-201ENST00000328642 SCAF11Q99590 1463 aaKnown RBP20.18■□□□□ 0.82
SYNM-201ENST00000328642 ABCC10Q5T3U5 1492 aa20.18■□□□□ 0.82
SYNM-201ENST00000328642 DUSP27Q5VZP5 1158 aa20.18■□□□□ 0.82
SYNM-201ENST00000328642 SPINK5Q9NQ38 1064 aaPredicted RBP20.18■□□□□ 0.82
SYNM-201ENST00000328642 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
SYNM-201ENST00000328642 NOB1Q9ULX3 412 aaKnown RBP20.17■□□□□ 0.82
SYNM-201ENST00000328642 DUOX2Q9NRD8 1548 aa20.17■□□□□ 0.82
SYNM-201ENST00000328642 CCDC61Q9Y6R9 512 aa20.17■□□□□ 0.82
SYNM-201ENST00000328642 TMPOP42166 694 aaKnown RBP20.16■□□□□ 0.82
SYNM-201ENST00000328642 TNNQ9UQP3 1299 aa20.16■□□□□ 0.82
SYNM-201ENST00000328642 EIF5BO60841 1220 aaKnown RBP20.15■□□□□ 0.82
SYNM-201ENST00000328642 LMOD3Q0VAK6 560 aa20.15■□□□□ 0.82
SYNM-201ENST00000328642 TSPYL4Q9UJ04 414 aa20.15■□□□□ 0.82
SYNM-201ENST00000328642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.15■□□□□ 0.82
SYNM-201ENST00000328642 TRIM6-TRIM34B2RNG4 842 aa20.13■□□□□ 0.81
SYNM-201ENST00000328642 MSH5O43196 834 aa20.13■□□□□ 0.81
SYNM-201ENST00000328642 DMRT2Q9Y5R5 561 aa20.13■□□□□ 0.81
SYNM-201ENST00000328642 FAM83GA6ND36 823 aa20.12■□□□□ 0.81
SYNM-201ENST00000328642 TEFQ10587 303 aa20.12■□□□□ 0.81
SYNM-201ENST00000328642 FKBP5Q13451 457 aaPredicted RBP20.12■□□□□ 0.81
SYNM-201ENST00000328642 MCM10Q7L590 875 aa20.12■□□□□ 0.81
SYNM-201ENST00000328642 CHMP4BQ9H444 224 aaKnown RBP20.12■□□□□ 0.81
SYNM-201ENST00000328642 USP35Q9P2H5 1018 aa20.12■□□□□ 0.81
SYNM-201ENST00000328642 ADGRL2O95490 1459 aa20.12■□□□□ 0.81
SYNM-201ENST00000328642 HSCBQ8IWL3 235 aa20.12■□□□□ 0.81
SYNM-201ENST00000328642 FYB1O15117 783 aa20.11■□□□□ 0.81
SYNM-201ENST00000328642 CASC1Q6TDU7 716 aa20.11■□□□□ 0.81
SYNM-201ENST00000328642 USHBP1Q8N6Y0 703 aa20.11■□□□□ 0.81
SYNM-201ENST00000328642 KCNJ4P48050 445 aa20.1■□□□□ 0.81
SYNM-201ENST00000328642 DDX19BQ9UMR2 479 aa20.1■□□□□ 0.81
SYNM-201ENST00000328642 AMOTL2Q9Y2J4 779 aa20.1■□□□□ 0.81
SYNM-201ENST00000328642 PDZRN3Q9UPQ7 1066 aa20.1■□□□□ 0.81
SYNM-201ENST00000328642 SPATA31E1Q6ZUB1 1445 aa20.1■□□□□ 0.81
SYNM-201ENST00000328642 CHMP3Q9Y3E7 222 aa20.1■□□□□ 0.81
SYNM-201ENST00000328642 ABCA8O94911 1581 aa20.1■□□□□ 0.81
SYNM-201ENST00000328642 FANCIQ9NVI1 1328 aa20.09■□□□□ 0.81
SYNM-201ENST00000328642 TWISTNBQ3B726 338 aaPredicted RBP20.09■□□□□ 0.81
SYNM-201ENST00000328642 THEMISQ8N1K5 641 aaPredicted RBP20.09■□□□□ 0.81
SYNM-201ENST00000328642 GNAI1P63096 354 aa20.09■□□□□ 0.81
SYNM-201ENST00000328642 FOXD4L5Q5VV16 416 aaPredicted RBP20.09■□□□□ 0.81
SYNM-201ENST00000328642 FOXD4L4Q8WXT5 416 aaPredicted RBP20.09■□□□□ 0.81
SYNM-201ENST00000328642 SSH1Q8WYL5 1049 aa20.08■□□□□ 0.81
SYNM-201ENST00000328642 SHANK2Q9UPX8 1470 aa20.08■□□□□ 0.8
SYNM-201ENST00000328642 PARD3Q8TEW0 1356 aa20.08■□□□□ 0.8
SYNM-201ENST00000328642 PLEKHH1Q9ULM0 1364 aa20.07■□□□□ 0.8
SYNM-201ENST00000328642 WASLO00401 505 aaPredicted RBP20.07■□□□□ 0.8
SYNM-201ENST00000328642 PROSER2Q86WR7 435 aaPredicted RBP20.07■□□□□ 0.8
SYNM-201ENST00000328642 NLRP2Q9NX02 1062 aa20.07■□□□□ 0.8
SYNM-201ENST00000328642 ARHGEF12Q9NZN5 1544 aa20.07■□□□□ 0.8
SYNM-201ENST00000328642 AIMP1Q12904 312 aaKnown RBP20.06■□□□□ 0.8
SYNM-201ENST00000328642 ZNF518AQ6AHZ1 1483 aa20.06■□□□□ 0.8
SYNM-201ENST00000328642 FOXO3O43524 673 aa20.06■□□□□ 0.8
SYNM-201ENST00000328642 TTC37Q6PGP7 1564 aa20.06■□□□□ 0.8
SYNM-201ENST00000328642 RARSP54136 660 aaKnown RBP20.05■□□□□ 0.8
SYNM-201ENST00000328642 RILPL2Q969X0 211 aa20.05■□□□□ 0.8
SYNM-201ENST00000328642 ZC3H6P61129 1189 aaKnown RBP20.05■□□□□ 0.8
SYNM-201ENST00000328642 UGGT1Q9NYU2 1555 aa20.05■□□□□ 0.8
SYNM-201ENST00000328642 NAP1L2Q9ULW6 460 aaPredicted RBP20.05■□□□□ 0.8
SYNM-201ENST00000328642 SAMD9LQ8IVG5 1584 aa20.04■□□□□ 0.8
SYNM-201ENST00000328642 FOXD4L6Q3SYB3 417 aaPredicted RBP20.04■□□□□ 0.8
SYNM-201ENST00000328642 FOXD4L3Q6VB84 417 aaPredicted RBP20.04■□□□□ 0.8
SYNM-201ENST00000328642 ATAD2Q6PL18 1390 aa20.04■□□□□ 0.8
SYNM-201ENST00000328642 TMEM57Q8N5G2 664 aa20.03■□□□□ 0.8
SYNM-201ENST00000328642 BACH2Q9BYV9 841 aa20.03■□□□□ 0.8
SYNM-201ENST00000328642 SLC4A2P04920 1241 aa20.02■□□□□ 0.8
SYNM-201ENST00000328642 C1orf141Q5JVX7 400 aa20.02■□□□□ 0.8
SYNM-201ENST00000328642 HSP90AB2PQ58FF8 381 aa20.02■□□□□ 0.79
SYNM-201ENST00000328642 CHD1O14646 1710 aa20.01■□□□□ 0.79
SYNM-201ENST00000328642 LRRIQ1Q96JM4 1722 aa20.01■□□□□ 0.79
SYNM-201ENST00000328642 GCC2Q8IWJ2 1684 aa20.01■□□□□ 0.79
SYNM-201ENST00000328642 ATF7IPQ6VMQ6 1270 aa20.01■□□□□ 0.79
SYNM-201ENST00000328642 AEBP1Q8IUX7 1158 aa20.01■□□□□ 0.79
SYNM-201ENST00000328642 WDR63Q8IWG1 891 aa20.01■□□□□ 0.79
SYNM-201ENST00000328642 IGHDP01880 384 aa20■□□□□ 0.79
SYNM-201ENST00000328642 PDE3AQ14432 1141 aa20■□□□□ 0.79
SYNM-201ENST00000328642 PLA2R1Q13018 1463 aa20■□□□□ 0.79
SYNM-201ENST00000328642 KIF16BQ96L93 1317 aa19.99■□□□□ 0.79
SYNM-201ENST00000328642 ANP32BQ92688 251 aaKnown RBP19.99■□□□□ 0.79
SYNM-201ENST00000328642 YEATS2Q9ULM3 1422 aa19.99■□□□□ 0.79
SYNM-201ENST00000328642 UHRF1BP1Q6BDS2 1440 aa19.98■□□□□ 0.79
SYNM-201ENST00000328642 ZNF692Q9BU19 519 aaPredicted RBP19.98■□□□□ 0.79
SYNM-201ENST00000328642 FCHSD2O94868 740 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms