RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 IQSEC2Q5JU85 1478 aa16.12■□□□□ 0.17
CCDC60-201ENST00000327554 TNPO1Q92973 898 aaKnown RBP16.12■□□□□ 0.17
CCDC60-201ENST00000327554 DUOX2Q9NRD8 1548 aa16.12■□□□□ 0.17
CCDC60-201ENST00000327554 IFT140Q96RY7 1462 aa16.12■□□□□ 0.17
CCDC60-201ENST00000327554 POLR3AO14802 1390 aaPredicted RBP16.12■□□□□ 0.17
CCDC60-201ENST00000327554 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
CCDC60-201ENST00000327554 SYCP2Q9BX26 1530 aa16.11■□□□□ 0.17
CCDC60-201ENST00000327554 TTC37Q6PGP7 1564 aa16.11■□□□□ 0.17
CCDC60-201ENST00000327554 CARMIL2Q6F5E8 1435 aa16.11■□□□□ 0.17
CCDC60-201ENST00000327554 KIAA1211Q6ZU35 1233 aa16.11■□□□□ 0.17
CCDC60-201ENST00000327554 RSPH4AQ5TD94 716 aa16.1■□□□□ 0.17
CCDC60-201ENST00000327554 PHF23Q9BUL5 403 aaPredicted RBP16.1■□□□□ 0.17
CCDC60-201ENST00000327554 BCL2L13Q9BXK5 485 aa16.1■□□□□ 0.17
CCDC60-201ENST00000327554 SMC5Q8IY18 1101 aa16.09■□□□□ 0.17
CCDC60-201ENST00000327554 SNX21Q969T3 373 aa16.09■□□□□ 0.17
CCDC60-201ENST00000327554 MVPQ14764 893 aaKnown RBP16.09■□□□□ 0.17
CCDC60-201ENST00000327554 PPP1R9BQ96SB3 815 aa16.09■□□□□ 0.17
CCDC60-201ENST00000327554 CARD14Q9BXL6 1004 aa16.08■□□□□ 0.17
CCDC60-201ENST00000327554 CIZ1Q9ULV3 898 aaPredicted RBP16.08■□□□□ 0.17
CCDC60-201ENST00000327554 RAB3GAP1Q15042 981 aa16.08■□□□□ 0.16
CCDC60-201ENST00000327554 SKOR2Q2VWA4 1001 aaPredicted RBP16.08■□□□□ 0.16
CCDC60-201ENST00000327554 RBM25P49756 843 aaKnown RBP16.07■□□□□ 0.16
CCDC60-201ENST00000327554 CCDC173Q0VFZ6 552 aa16.07■□□□□ 0.16
CCDC60-201ENST00000327554 RRP7AQ9Y3A4 280 aaKnown RBP16.07■□□□□ 0.16
CCDC60-201ENST00000327554 OFD1O75665 1012 aa16.07■□□□□ 0.16
CCDC60-201ENST00000327554 NEUROD2Q15784 382 aa16.07■□□□□ 0.16
CCDC60-201ENST00000327554 GBP4Q96PP9 640 aa16.07■□□□□ 0.16
CCDC60-201ENST00000327554 CALD1Q05682 793 aaKnown RBP16.06■□□□□ 0.16
CCDC60-201ENST00000327554 WDR63Q8IWG1 891 aa16.06■□□□□ 0.16
CCDC60-201ENST00000327554 ERVK-7P63135 1459 aa16.06■□□□□ 0.16
CCDC60-201ENST00000327554 KIAA1210Q9ULL0 1709 aa16.06■□□□□ 0.16
CCDC60-201ENST00000327554 KANK1Q14678 1352 aa16.06■□□□□ 0.16
CCDC60-201ENST00000327554 ZSCAN30Q86W11 494 aa16.06■□□□□ 0.16
CCDC60-201ENST00000327554 DNAJC5BQ9UF47 199 aa16.06■□□□□ 0.16
CCDC60-201ENST00000327554 RIPK4P57078 832 aa16.05■□□□□ 0.16
CCDC60-201ENST00000327554 RUNDC1Q96C34 613 aa16.05■□□□□ 0.16
CCDC60-201ENST00000327554 TCP11L2Q8N4U5 519 aa16.05■□□□□ 0.16
CCDC60-201ENST00000327554 HDAC1Q13547 482 aaPredicted RBP16.04■□□□□ 0.16
CCDC60-201ENST00000327554 PTMSP20962 102 aa16.04■□□□□ 0.16
CCDC60-201ENST00000327554 TERF1P54274 439 aa16.03■□□□□ 0.16
CCDC60-201ENST00000327554 JPH4Q96JJ6 628 aa16.03■□□□□ 0.16
CCDC60-201ENST00000327554 PRDM4Q9UKN5 801 aa16.03■□□□□ 0.16
CCDC60-201ENST00000327554 NASPP49321 788 aaPredicted RBP16.02■□□□□ 0.16
CCDC60-201ENST00000327554 ZKSCAN2Q63HK3 967 aa16.02■□□□□ 0.16
CCDC60-201ENST00000327554 TRPM2O94759 1503 aa16.02■□□□□ 0.15
CCDC60-201ENST00000327554 IBTKQ9P2D0 1353 aaPredicted RBP16.02■□□□□ 0.15
CCDC60-201ENST00000327554 DZIP1LQ8IYY4 767 aaKnown RBP16.02■□□□□ 0.15
CCDC60-201ENST00000327554 HSP90AB1P08238 724 aaKnown RBP16.01■□□□□ 0.15
CCDC60-201ENST00000327554 CCDC27Q2M243 656 aa16.01■□□□□ 0.15
CCDC60-201ENST00000327554 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.01■□□□□ 0.15
CCDC60-201ENST00000327554 CLTCL1P53675 1640 aa16.01■□□□□ 0.15
CCDC60-201ENST00000327554 KIF2CQ99661 725 aa16■□□□□ 0.15
CCDC60-201ENST00000327554 FTSJ3Q8IY81 847 aaKnown RBP16■□□□□ 0.15
CCDC60-201ENST00000327554 ARHGAP5Q13017 1502 aa15.99■□□□□ 0.15
CCDC60-201ENST00000327554 RBM10P98175 930 aaKnown RBP15.99■□□□□ 0.15
CCDC60-201ENST00000327554 CD2BP2O95400 341 aaKnown RBP15.99■□□□□ 0.15
CCDC60-201ENST00000327554 AK9Q5TCS8 1911 aa15.98■□□□□ 0.15
CCDC60-201ENST00000327554 STAC3Q96MF2 364 aa15.98■□□□□ 0.15
CCDC60-201ENST00000327554 MSNP26038 577 aaKnown RBP15.97■□□□□ 0.15
CCDC60-201ENST00000327554 CLEC17AQ6ZS10 378 aa15.97■□□□□ 0.15
CCDC60-201ENST00000327554 ARHGAP31Q2M1Z3 1444 aa15.97■□□□□ 0.15
CCDC60-201ENST00000327554 CFAP74Q9C0B2 1584 aa15.97■□□□□ 0.15
CCDC60-201ENST00000327554 SSFA2P28290 1259 aa15.96■□□□□ 0.15
CCDC60-201ENST00000327554 KLHL40Q2TBA0 621 aa15.96■□□□□ 0.15
CCDC60-201ENST00000327554 CHMP7Q8WUX9 453 aaPredicted RBP15.96■□□□□ 0.15
CCDC60-201ENST00000327554 ADGRB2O60241 1585 aa15.96■□□□□ 0.15
CCDC60-201ENST00000327554 TRIM27P14373 513 aa15.96■□□□□ 0.15
CCDC60-201ENST00000327554 ABCA6Q8N139 1617 aa15.96■□□□□ 0.15
CCDC60-201ENST00000327554 MYO3AQ8NEV4 1616 aa15.96■□□□□ 0.15
CCDC60-201ENST00000327554 ZNF518AQ6AHZ1 1483 aa15.96■□□□□ 0.14
CCDC60-201ENST00000327554 MAP7D2Q96T17 732 aa15.95■□□□□ 0.14
CCDC60-201ENST00000327554 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
CCDC60-201ENST00000327554 DDX19BQ9UMR2 479 aa15.95■□□□□ 0.14
CCDC60-201ENST00000327554 HS1BP3Q53T59 392 aa15.94■□□□□ 0.14
CCDC60-201ENST00000327554 ANP32BQ92688 251 aaKnown RBP15.94■□□□□ 0.14
CCDC60-201ENST00000327554 PTPRTO14522 1441 aa15.94■□□□□ 0.14
CCDC60-201ENST00000327554 K7ELQ4 463 aaPredicted RBP15.94■□□□□ 0.14
CCDC60-201ENST00000327554 NUCB1Q02818 461 aa15.94■□□□□ 0.14
CCDC60-201ENST00000327554 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
CCDC60-201ENST00000327554 NSD3Q9BZ95 1437 aa15.94■□□□□ 0.14
CCDC60-201ENST00000327554 R3HCC1Q9Y3T6 440 aaKnown RBP15.94■□□□□ 0.14
CCDC60-201ENST00000327554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.94■□□□□ 0.14
CCDC60-201ENST00000327554 ZNF500O60304 480 aaPredicted RBP15.93■□□□□ 0.14
CCDC60-201ENST00000327554 SLC24A1O60721 1099 aa15.93■□□□□ 0.14
CCDC60-201ENST00000327554 ZNF445P59923 1031 aa15.93■□□□□ 0.14
CCDC60-201ENST00000327554 MORC1Q86VD1 984 aa15.93■□□□□ 0.14
CCDC60-201ENST00000327554 ITPRIPQ8IWB1 547 aa15.93■□□□□ 0.14
CCDC60-201ENST00000327554 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.93■□□□□ 0.14
CCDC60-201ENST00000327554 MAP3K4Q9Y6R4 1608 aa15.93■□□□□ 0.14
CCDC60-201ENST00000327554 BAG4O95429 457 aaKnown RBP15.93■□□□□ 0.14
CCDC60-201ENST00000327554 CT47B1P0C2W7 299 aaPredicted RBP15.93■□□□□ 0.14
CCDC60-201ENST00000327554 FAM13BQ9NYF5 915 aa15.93■□□□□ 0.14
CCDC60-201ENST00000327554 DDX49Q9Y6V7 483 aaKnown RBP15.93■□□□□ 0.14
CCDC60-201ENST00000327554 ERCC6Q03468 1493 aa15.93■□□□□ 0.14
CCDC60-201ENST00000327554 TNNT2P45379 298 aaPredicted RBP15.92■□□□□ 0.14
CCDC60-201ENST00000327554 GAS2L2Q8NHY3 880 aa15.92■□□□□ 0.14
CCDC60-201ENST00000327554 SMC4Q9NTJ3 1288 aa15.92■□□□□ 0.14
CCDC60-201ENST00000327554 NOL7Q9UMY1 257 aaKnown RBP15.92■□□□□ 0.14
CCDC60-201ENST00000327554 GOLGA6L22H0YM25 854 aa15.92■□□□□ 0.14
CCDC60-201ENST00000327554 PDLIM2Q96JY6 352 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms