RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 CDC42BPGQ6DT37 1551 aa26.2■■□□□ 1.78
PTPMT1-201ENST00000326656 SIRT1Q96EB6 747 aa26.18■■□□□ 1.78
PTPMT1-201ENST00000326656 RAB3GAP2Q9H2M9 1393 aa26.17■■□□□ 1.78
PTPMT1-201ENST00000326656 C14orf93Q9H972 538 aaKnown RBP26.16■■□□□ 1.78
PTPMT1-201ENST00000326656 STK26Q9P289 416 aa26.16■■□□□ 1.78
PTPMT1-201ENST00000326656 RXRBP28702 533 aa26.15■■□□□ 1.78
PTPMT1-201ENST00000326656 KNDC1Q76NI1 1749 aa26.14■■□□□ 1.78
PTPMT1-201ENST00000326656 HRCP23327 699 aa26.14■■□□□ 1.78
PTPMT1-201ENST00000326656 TMEM132EQ6IEE7 984 aa26.14■■□□□ 1.78
PTPMT1-201ENST00000326656 WAPLQ7Z5K2 1190 aa26.13■■□□□ 1.77
PTPMT1-201ENST00000326656 YTHDC2Q9H6S0 1430 aaKnown RBP26.13■■□□□ 1.77
PTPMT1-201ENST00000326656 AFF2P51816 1311 aa26.13■■□□□ 1.77
PTPMT1-201ENST00000326656 NPHP3Q7Z494 1330 aa26.13■■□□□ 1.77
PTPMT1-201ENST00000326656 NRXN1Q9ULB1 1477 aa26.12■■□□□ 1.77
PTPMT1-201ENST00000326656 ESCO1Q5FWF5 840 aa26.12■■□□□ 1.77
PTPMT1-201ENST00000326656 MYOM2P54296 1465 aa26.11■■□□□ 1.77
PTPMT1-201ENST00000326656 CDK12Q9NYV4 1490 aaPredicted RBP26.11■■□□□ 1.77
PTPMT1-201ENST00000326656 DHX57Q6P158 1386 aaKnown RBP26.09■■□□□ 1.77
PTPMT1-201ENST00000326656 C8orf37Q96NL8 207 aa26.08■■□□□ 1.77
PTPMT1-201ENST00000326656 NGLY1Q96IV0 654 aa26.06■■□□□ 1.76
PTPMT1-201ENST00000326656 STAC3Q96MF2 364 aa26.06■■□□□ 1.76
PTPMT1-201ENST00000326656 CFAP70Q5T0N1 1121 aa26.05■■□□□ 1.76
PTPMT1-201ENST00000326656 QTRT2Q9H974 415 aaKnown RBP26.05■■□□□ 1.76
PTPMT1-201ENST00000326656 COL22A1Q8NFW1 1626 aaPredicted RBP26.05■■□□□ 1.76
PTPMT1-201ENST00000326656 PLEKHH1Q9ULM0 1364 aa26.05■■□□□ 1.76
PTPMT1-201ENST00000326656 FOXO3O43524 673 aa26.04■■□□□ 1.76
PTPMT1-201ENST00000326656 ADAMTS2O95450 1211 aa26.03■■□□□ 1.76
PTPMT1-201ENST00000326656 RBM6P78332 1123 aaKnown RBP26.03■■□□□ 1.76
PTPMT1-201ENST00000326656 PXDNQ92626 1479 aa26.03■■□□□ 1.76
PTPMT1-201ENST00000326656 UPF1Q92900 1129 aaKnown RBP eCLIP26.01■■□□□ 1.75
PTPMT1-201ENST00000326656 FMN2Q9NZ56 1722 aa26.01■■□□□ 1.75
PTPMT1-201ENST00000326656 FNBP4Q8N3X1 1017 aaPredicted RBP26■■□□□ 1.75
PTPMT1-201ENST00000326656 NUTM2FA1L443 756 aa25.98■■□□□ 1.75
PTPMT1-201ENST00000326656 KIF1AQ12756 1690 aa25.98■■□□□ 1.75
PTPMT1-201ENST00000326656 DLC1Q96QB1 1528 aa25.98■■□□□ 1.75
PTPMT1-201ENST00000326656 USP21Q9UK80 565 aa25.96■■□□□ 1.75
PTPMT1-201ENST00000326656 PRAM1Q96QH2 718 aa25.95■■□□□ 1.74
PTPMT1-201ENST00000326656 TRPC5Q9UL62 973 aaPredicted RBP25.95■■□□□ 1.74
PTPMT1-201ENST00000326656 POGKQ9P215 609 aa25.94■■□□□ 1.74
PTPMT1-201ENST00000326656 XPCQ01831 940 aaPredicted RBP25.93■■□□□ 1.74
PTPMT1-201ENST00000326656 DCAF11Q8TEB1 546 aa25.93■■□□□ 1.74
PTPMT1-201ENST00000326656 SPATA31A3Q5VYP0 1347 aa25.92■■□□□ 1.74
PTPMT1-201ENST00000326656 PHF8Q9UPP1 1060 aa25.92■■□□□ 1.74
PTPMT1-201ENST00000326656 ADGRB1O14514 1584 aa25.91■■□□□ 1.74
PTPMT1-201ENST00000326656 PSME1Q06323 249 aa25.91■■□□□ 1.74
PTPMT1-201ENST00000326656 KRT28Q7Z3Y7 464 aa25.91■■□□□ 1.74
PTPMT1-201ENST00000326656 MARF1Q9Y4F3 1742 aaKnown RBP25.9■■□□□ 1.74
PTPMT1-201ENST00000326656 KDM2AQ9Y2K7 1162 aa25.89■■□□□ 1.74
PTPMT1-201ENST00000326656 RGS12O14924 1447 aa25.88■■□□□ 1.73
PTPMT1-201ENST00000326656 RGPD8O14715 1765 aaPredicted RBP25.88■■□□□ 1.73
PTPMT1-201ENST00000326656 ANKARQ7Z5J8 1434 aa25.88■■□□□ 1.73
PTPMT1-201ENST00000326656 ATRNO75882 1429 aa25.87■■□□□ 1.73
PTPMT1-201ENST00000326656 SAFB2Q14151 953 aaKnown RBP eCLIP25.86■■□□□ 1.73
PTPMT1-201ENST00000326656 ADGRB2O60241 1585 aa25.86■■□□□ 1.73
PTPMT1-201ENST00000326656 SBNO1A3KN83 1393 aa25.85■■□□□ 1.73
PTPMT1-201ENST00000326656 TRAK1Q9UPV9 953 aa25.85■■□□□ 1.73
PTPMT1-201ENST00000326656 BCL9LQ86UU0 1499 aa25.85■■□□□ 1.73
PTPMT1-201ENST00000326656 EIF3AQ14152 1382 aaKnown RBP25.84■■□□□ 1.73
PTPMT1-201ENST00000326656 TNS3Q68CZ2 1445 aa25.81■■□□□ 1.72
PTPMT1-201ENST00000326656 ARHGEF10O15013 1369 aa25.8■■□□□ 1.72
PTPMT1-201ENST00000326656 USP32Q8NFA0 1604 aa25.78■■□□□ 1.72
PTPMT1-201ENST00000326656 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.78■■□□□ 1.72
PTPMT1-201ENST00000326656 GJD4Q96KN9 370 aaPredicted RBP25.78■■□□□ 1.72
PTPMT1-201ENST00000326656 ATAD2Q6PL18 1390 aa25.78■■□□□ 1.72
PTPMT1-201ENST00000326656 WASLO00401 505 aaPredicted RBP25.77■■□□□ 1.72
PTPMT1-201ENST00000326656 UNC5CLQ8IV45 518 aa25.77■■□□□ 1.72
PTPMT1-201ENST00000326656 SLIT2O94813 1529 aa25.77■■□□□ 1.72
PTPMT1-201ENST00000326656 MINK1Q8N4C8 1332 aaPredicted RBP25.76■■□□□ 1.71
PTPMT1-201ENST00000326656 HAP1P54257 671 aaPredicted RBP25.75■■□□□ 1.71
PTPMT1-201ENST00000326656 PMFBP1Q8TBY8 1022 aa25.75■■□□□ 1.71
PTPMT1-201ENST00000326656 HIRIP3Q9BW71 556 aaPredicted RBP25.75■■□□□ 1.71
PTPMT1-201ENST00000326656 TULP4Q9NRJ4 1543 aa25.74■■□□□ 1.71
PTPMT1-201ENST00000326656 GPRASP1Q5JY77 1395 aa25.74■■□□□ 1.71
PTPMT1-201ENST00000326656 KIAA1210Q9ULL0 1709 aa25.71■■□□□ 1.71
PTPMT1-201ENST00000326656 LMOD2Q6P5Q4 547 aa25.71■■□□□ 1.71
PTPMT1-201ENST00000326656 PRR36Q9H6K5 1346 aa25.7■■□□□ 1.71
PTPMT1-201ENST00000326656 CABLES1Q8TDN4 633 aa25.7■■□□□ 1.7
PTPMT1-201ENST00000326656 ARHGEF28Q8N1W1 1705 aaKnown RBP25.69■■□□□ 1.7
PTPMT1-201ENST00000326656 CCDC125Q86Z20 511 aa25.69■■□□□ 1.7
PTPMT1-201ENST00000326656 NWD2Q9ULI1 1742 aa25.68■■□□□ 1.7
PTPMT1-201ENST00000326656 TRPM3Q9HCF6 1732 aaPredicted RBP25.67■■□□□ 1.7
PTPMT1-201ENST00000326656 VPS72Q15906 364 aa25.66■■□□□ 1.7
PTPMT1-201ENST00000326656 NGDNQ8NEJ9 315 aaKnown RBP25.66■■□□□ 1.7
PTPMT1-201ENST00000326656 RALGAPBQ86X10 1494 aa25.66■■□□□ 1.7
PTPMT1-201ENST00000326656 ABCA3Q99758 1704 aa25.65■■□□□ 1.7
PTPMT1-201ENST00000326656 ITSN1Q15811 1721 aa25.64■■□□□ 1.7
PTPMT1-201ENST00000326656 NUDT16Q96DE0 195 aaKnown RBP25.64■■□□□ 1.7
PTPMT1-201ENST00000326656 ALS2Q96Q42 1657 aa25.64■■□□□ 1.69
PTPMT1-201ENST00000326656 FAM83GA6ND36 823 aa25.63■■□□□ 1.69
PTPMT1-201ENST00000326656 ONECUT3O60422 494 aaPredicted RBP25.63■■□□□ 1.69
PTPMT1-201ENST00000326656 GLI3P10071 1580 aa25.63■■□□□ 1.69
PTPMT1-201ENST00000326656 PLCH1Q4KWH8 1693 aa25.61■■□□□ 1.69
PTPMT1-201ENST00000326656 CDK19Q9BWU1 502 aa25.61■■□□□ 1.69
PTPMT1-201ENST00000326656 ATP7BP35670 1465 aa25.6■■□□□ 1.69
PTPMT1-201ENST00000326656 CCDC61Q9Y6R9 512 aa25.6■■□□□ 1.69
PTPMT1-201ENST00000326656 PLEKHG5O94827 1062 aa25.59■■□□□ 1.69
PTPMT1-201ENST00000326656 EP400Q96L91 3159 aa25.58■■□□□ 1.69
PTPMT1-201ENST00000326656 PAK3O75914 559 aaPredicted RBP25.57■■□□□ 1.68
PTPMT1-201ENST00000326656 NBPF1Q3BBV0 1214 aa25.57■■□□□ 1.68
PTPMT1-201ENST00000326656 SRCAPQ6ZRS2 3230 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms