RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 CFAP70Q5T0N1 1121 aa12.08□□□□□ -0.48
CCNC-201ENST00000326298 LRRC59Q96AG4 307 aaKnown RBP12.08□□□□□ -0.48
CCNC-201ENST00000326298 ANKRD30BQ9BXX2 1392 aa12.07□□□□□ -0.48
CCNC-201ENST00000326298 SOS2Q07890 1332 aaPredicted RBP12.07□□□□□ -0.48
CCNC-201ENST00000326298 TECPR2O15040 1411 aa12.07□□□□□ -0.48
CCNC-201ENST00000326298 LRPPRCP42704 1394 aaKnown RBP12.07□□□□□ -0.48
CCNC-201ENST00000326298 EP400Q96L91 3159 aa12.06□□□□□ -0.48
CCNC-201ENST00000326298 AFF2P51816 1311 aa12.06□□□□□ -0.48
CCNC-201ENST00000326298 ADAMTS2O95450 1211 aa12.06□□□□□ -0.48
CCNC-201ENST00000326298 ESCO1Q5FWF5 840 aa12.06□□□□□ -0.48
CCNC-201ENST00000326298 LAMC1P11047 1609 aa12.05□□□□□ -0.48
CCNC-201ENST00000326298 YTHDC2Q9H6S0 1430 aaKnown RBP12.05□□□□□ -0.48
CCNC-201ENST00000326298 NRXN1Q9ULB1 1477 aa12.05□□□□□ -0.48
CCNC-201ENST00000326298 ABCC11Q96J66 1382 aa12.05□□□□□ -0.48
CCNC-201ENST00000326298 FOXO3O43524 673 aa12.05□□□□□ -0.48
CCNC-201ENST00000326298 C8orf37Q96NL8 207 aa12.05□□□□□ -0.48
CCNC-201ENST00000326298 C14orf93Q9H972 538 aaKnown RBP12.05□□□□□ -0.48
CCNC-201ENST00000326298 SAFB2Q14151 953 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCNC-201ENST00000326298 CDC42BPGQ6DT37 1551 aa12.04□□□□□ -0.48
CCNC-201ENST00000326298 ZNF772Q68DY9 489 aaPredicted RBP12.03□□□□□ -0.48
CCNC-201ENST00000326298 PXDNQ92626 1479 aa12.03□□□□□ -0.48
CCNC-201ENST00000326298 KDM2AQ9Y2K7 1162 aa12.02□□□□□ -0.49
CCNC-201ENST00000326298 KNDC1Q76NI1 1749 aa12.02□□□□□ -0.49
CCNC-201ENST00000326298 MYOM2P54296 1465 aa12.01□□□□□ -0.49
CCNC-201ENST00000326298 RXRBP28702 533 aa12.01□□□□□ -0.49
CCNC-201ENST00000326298 PRAM1Q96QH2 718 aa12.01□□□□□ -0.49
CCNC-201ENST00000326298 RGPD8O14715 1765 aaPredicted RBP12□□□□□ -0.49
CCNC-201ENST00000326298 QTRT2Q9H974 415 aaKnown RBP12□□□□□ -0.49
CCNC-201ENST00000326298 ADGRB1O14514 1584 aa12□□□□□ -0.49
CCNC-201ENST00000326298 FMN2Q9NZ56 1722 aa11.99□□□□□ -0.49
CCNC-201ENST00000326298 DCAF11Q8TEB1 546 aa11.99□□□□□ -0.49
CCNC-201ENST00000326298 NGLY1Q96IV0 654 aa11.99□□□□□ -0.49
CCNC-201ENST00000326298 DHX57Q6P158 1386 aaKnown RBP11.99□□□□□ -0.49
CCNC-201ENST00000326298 NPHP3Q7Z494 1330 aa11.98□□□□□ -0.49
CCNC-201ENST00000326298 UPF1Q92900 1129 aaKnown RBP eCLIP11.98□□□□□ -0.496e-8■■■□□ 16.1
CCNC-201ENST00000326298 HIRIP3Q9BW71 556 aaPredicted RBP11.98□□□□□ -0.49
CCNC-201ENST00000326298 RGS12O14924 1447 aa11.98□□□□□ -0.49
CCNC-201ENST00000326298 PLEKHG5O94827 1062 aa11.98□□□□□ -0.49
CCNC-201ENST00000326298 TRAK1Q9UPV9 953 aa11.98□□□□□ -0.49
CCNC-201ENST00000326298 COL22A1Q8NFW1 1626 aaPredicted RBP11.97□□□□□ -0.49
CCNC-201ENST00000326298 USP32Q8NFA0 1604 aa11.96□□□□□ -0.49
CCNC-201ENST00000326298 CABLES1Q8TDN4 633 aa11.96□□□□□ -0.49
CCNC-201ENST00000326298 SIRT1Q96EB6 747 aa11.96□□□□□ -0.49
CCNC-201ENST00000326298 FNBP4Q8N3X1 1017 aaPredicted RBP11.95□□□□□ -0.5
CCNC-201ENST00000326298 USP21Q9UK80 565 aa11.95□□□□□ -0.5
CCNC-201ENST00000326298 PRR36Q9H6K5 1346 aa11.95□□□□□ -0.5
CCNC-201ENST00000326298 KRT28Q7Z3Y7 464 aa11.95□□□□□ -0.5
CCNC-201ENST00000326298 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
CCNC-201ENST00000326298 BCL9LQ86UU0 1499 aa11.95□□□□□ -0.5
CCNC-201ENST00000326298 SPATA31A3Q5VYP0 1347 aa11.94□□□□□ -0.5
CCNC-201ENST00000326298 MINK1Q8N4C8 1332 aaPredicted RBP11.94□□□□□ -0.5
CCNC-201ENST00000326298 RBM6P78332 1123 aaKnown RBP11.94□□□□□ -0.5
CCNC-201ENST00000326298 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
CCNC-201ENST00000326298 HRCP23327 699 aa11.93□□□□□ -0.5
CCNC-201ENST00000326298 POGKQ9P215 609 aa11.93□□□□□ -0.5
CCNC-201ENST00000326298 CDK12Q9NYV4 1490 aaPredicted RBP11.93□□□□□ -0.5
CCNC-201ENST00000326298 ACIN1Q9UKV3 1341 aaKnown RBP11.93□□□□□ -0.5
CCNC-201ENST00000326298 DLC1Q96QB1 1528 aa11.92□□□□□ -0.5
CCNC-201ENST00000326298 ATRNO75882 1429 aa11.91□□□□□ -0.5
CCNC-201ENST00000326298 NBPF1Q3BBV0 1214 aa11.91□□□□□ -0.5
CCNC-201ENST00000326298 KIF1AQ12756 1690 aa11.9□□□□□ -0.5
CCNC-201ENST00000326298 MARF1Q9Y4F3 1742 aaKnown RBP11.9□□□□□ -0.5
CCNC-201ENST00000326298 ADGRB2O60241 1585 aa11.89□□□□□ -0.51
CCNC-201ENST00000326298 LMOD2Q6P5Q4 547 aa11.89□□□□□ -0.51
CCNC-201ENST00000326298 TRPC5Q9UL62 973 aaPredicted RBP11.89□□□□□ -0.51
CCNC-201ENST00000326298 TNS3Q68CZ2 1445 aa11.89□□□□□ -0.51
CCNC-201ENST00000326298 SLIT2O94813 1529 aa11.88□□□□□ -0.51
CCNC-201ENST00000326298 WASLO00401 505 aaPredicted RBP11.88□□□□□ -0.51
CCNC-201ENST00000326298 PSME1Q06323 249 aa11.88□□□□□ -0.51
CCNC-201ENST00000326298 ARHGEF28Q8N1W1 1705 aaKnown RBP11.88□□□□□ -0.51
CCNC-201ENST00000326298 SIN3AQ96ST3 1273 aa11.87□□□□□ -0.51
CCNC-201ENST00000326298 GLI3P10071 1580 aa11.87□□□□□ -0.51
CCNC-201ENST00000326298 ABCA3Q99758 1704 aa11.86□□□□□ -0.51
CCNC-201ENST00000326298 TRPM3Q9HCF6 1732 aaPredicted RBP11.86□□□□□ -0.51
CCNC-201ENST00000326298 GJD4Q96KN9 370 aaPredicted RBP11.86□□□□□ -0.51
CCNC-201ENST00000326298 ANKARQ7Z5J8 1434 aa11.86□□□□□ -0.51
CCNC-201ENST00000326298 FAM83GA6ND36 823 aa11.86□□□□□ -0.51
CCNC-201ENST00000326298 SBNO1A3KN83 1393 aa11.85□□□□□ -0.51
CCNC-201ENST00000326298 TULP4Q9NRJ4 1543 aa11.85□□□□□ -0.51
CCNC-201ENST00000326298 UNC5CLQ8IV45 518 aa11.85□□□□□ -0.51
CCNC-201ENST00000326298 ATP7BP35670 1465 aa11.85□□□□□ -0.51
CCNC-201ENST00000326298 RALGAPBQ86X10 1494 aa11.85□□□□□ -0.51
CCNC-201ENST00000326298 ALS2Q96Q42 1657 aa11.83□□□□□ -0.52
CCNC-201ENST00000326298 NUDT16Q96DE0 195 aaKnown RBP11.83□□□□□ -0.52
CCNC-201ENST00000326298 CDK19Q9BWU1 502 aa11.83□□□□□ -0.52
CCNC-201ENST00000326298 L3MBTL2Q969R5 705 aa11.83□□□□□ -0.52
CCNC-201ENST00000326298 PLCH1Q4KWH8 1693 aa11.83□□□□□ -0.52
CCNC-201ENST00000326298 HAP1P54257 671 aaPredicted RBP11.82□□□□□ -0.52
CCNC-201ENST00000326298 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.82□□□□□ -0.52
CCNC-201ENST00000326298 NUTM2GQ5VZR2 741 aa11.82□□□□□ -0.52
CCNC-201ENST00000326298 NGDNQ8NEJ9 315 aaKnown RBP11.82□□□□□ -0.52
CCNC-201ENST00000326298 STAC3Q96MF2 364 aa11.82□□□□□ -0.52
CCNC-201ENST00000326298 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
CCNC-201ENST00000326298 ARHGEF10O15013 1369 aa11.81□□□□□ -0.52
CCNC-201ENST00000326298 BRWD3Q6RI45 1802 aa11.81□□□□□ -0.52
CCNC-201ENST00000326298 CRYBG1Q9Y4K1 1723 aa11.8□□□□□ -0.52
CCNC-201ENST00000326298 ATAD2Q6PL18 1390 aa11.8□□□□□ -0.52
CCNC-201ENST00000326298 GPRASP1Q5JY77 1395 aa11.8□□□□□ -0.52
CCNC-201ENST00000326298 NEUROD1Q13562 356 aa11.79□□□□□ -0.52
CCNC-201ENST00000326298 VPS72Q15906 364 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms