RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 IDI1Q13907 227 aa26■■□□□ 1.75
SOX2-201ENST00000325404 C20orf194Q5TEA3 1177 aa25.97■■□□□ 1.75
SOX2-201ENST00000325404 NKTRP30414 1462 aaKnown RBP25.96■■□□□ 1.75
SOX2-201ENST00000325404 POLR3AO14802 1390 aaPredicted RBP25.94■■□□□ 1.74
SOX2-201ENST00000325404 MLECQ14165 292 aa25.94■■□□□ 1.74
SOX2-201ENST00000325404 NBR1Q14596 966 aa25.94■■□□□ 1.74
SOX2-201ENST00000325404 FBXO31Q5XUX0 539 aaPredicted RBP25.94■■□□□ 1.74
SOX2-201ENST00000325404 E9PSI1 815 aa25.93■■□□□ 1.74
SOX2-201ENST00000325404 VGFO15240 615 aaPredicted RBP25.93■■□□□ 1.74
SOX2-201ENST00000325404 DDRGK1Q96HY6 314 aa25.93■■□□□ 1.74
SOX2-201ENST00000325404 NEXMIFQ5QGS0 1516 aa25.93■■□□□ 1.74
SOX2-201ENST00000325404 CLTCQ00610 1675 aaKnown RBP25.93■■□□□ 1.74
SOX2-201ENST00000325404 RTL5Q5HYW3 569 aaPredicted RBP25.93■■□□□ 1.74
SOX2-201ENST00000325404 C14orf93Q9H972 538 aaKnown RBP25.93■■□□□ 1.74
SOX2-201ENST00000325404 CARD14Q9BXL6 1004 aa25.92■■□□□ 1.74
SOX2-201ENST00000325404 NPM2Q86SE8 214 aaKnown RBP25.9■■□□□ 1.74
SOX2-201ENST00000325404 USP35Q9P2H5 1018 aa25.9■■□□□ 1.74
SOX2-201ENST00000325404 APAF1O14727 1248 aa25.88■■□□□ 1.73
SOX2-201ENST00000325404 TMEM131LA2VDJ0 1609 aa25.88■■□□□ 1.73
SOX2-201ENST00000325404 NINLQ9Y2I6 1382 aa25.87■■□□□ 1.73
SOX2-201ENST00000325404 CENPJQ9HC77 1338 aaPredicted RBP25.87■■□□□ 1.73
SOX2-201ENST00000325404 ZFYVE9O95405 1425 aa25.87■■□□□ 1.73
SOX2-201ENST00000325404 ESF1Q9H501 851 aaKnown RBP25.87■■□□□ 1.73
SOX2-201ENST00000325404 ADGRB1O14514 1584 aa25.86■■□□□ 1.73
SOX2-201ENST00000325404 NUTM2DQ5VT03 806 aaPredicted RBP25.86■■□□□ 1.73
SOX2-201ENST00000325404 SPATA31D1Q6ZQQ2 1576 aa25.85■■□□□ 1.73
SOX2-201ENST00000325404 PPM1GO15355 546 aaPredicted RBP25.85■■□□□ 1.73
SOX2-201ENST00000325404 CCDC146Q8IYE0 955 aa25.85■■□□□ 1.73
SOX2-201ENST00000325404 USP32Q8NFA0 1604 aa25.84■■□□□ 1.73
SOX2-201ENST00000325404 PUS7Q96PZ0 661 aaKnown RBP25.84■■□□□ 1.73
SOX2-201ENST00000325404 MYO5BQ9ULV0 1848 aa25.83■■□□□ 1.72
SOX2-201ENST00000325404 FAM161AQ3B820 660 aa25.82■■□□□ 1.72
SOX2-201ENST00000325404 STAG3Q9UJ98 1225 aa25.82■■□□□ 1.72
SOX2-201ENST00000325404 PDE3AQ14432 1141 aa25.81■■□□□ 1.72
SOX2-201ENST00000325404 SPINK5Q9NQ38 1064 aaPredicted RBP25.81■■□□□ 1.72
SOX2-201ENST00000325404 TMEM132EQ6IEE7 984 aa25.8■■□□□ 1.72
SOX2-201ENST00000325404 TRAK1Q9UPV9 953 aa25.8■■□□□ 1.72
SOX2-201ENST00000325404 NCBP3Q53F19 620 aaKnown RBP25.8■■□□□ 1.72
SOX2-201ENST00000325404 ZMYM3Q14202 1370 aa25.79■■□□□ 1.72
SOX2-201ENST00000325404 TRHP20396 242 aaPredicted RBP25.78■■□□□ 1.72
SOX2-201ENST00000325404 CGNL1Q0VF96 1302 aa25.78■■□□□ 1.72
SOX2-201ENST00000325404 QRICH2Q9H0J4 1663 aa25.78■■□□□ 1.72
SOX2-201ENST00000325404 NSD3Q9BZ95 1437 aa25.77■■□□□ 1.72
SOX2-201ENST00000325404 SHPRHQ149N8 1683 aa25.77■■□□□ 1.72
SOX2-201ENST00000325404 AAMPQ13685 434 aa25.75■■□□□ 1.71
SOX2-201ENST00000325404 WWC1Q8IX03 1113 aa25.75■■□□□ 1.71
SOX2-201ENST00000325404 C8orf34Q49A92 452 aa25.74■■□□□ 1.71
SOX2-201ENST00000325404 MORC1Q86VD1 984 aa25.74■■□□□ 1.71
SOX2-201ENST00000325404 SKAP1Q86WV1 359 aa25.74■■□□□ 1.71
SOX2-201ENST00000325404 PHF23Q9BUL5 403 aaPredicted RBP25.74■■□□□ 1.71
SOX2-201ENST00000325404 A2ML1A8K2U0 1454 aa25.73■■□□□ 1.71
SOX2-201ENST00000325404 RUNDC1Q96C34 613 aa25.73■■□□□ 1.71
SOX2-201ENST00000325404 BCAR3O75815 825 aa25.72■■□□□ 1.71
SOX2-201ENST00000325404 IQSEC2Q5JU85 1478 aa25.72■■□□□ 1.71
SOX2-201ENST00000325404 NSD2O96028 1365 aa25.72■■□□□ 1.71
SOX2-201ENST00000325404 CCDC27Q2M243 656 aa25.7■■□□□ 1.71
SOX2-201ENST00000325404 WDR63Q8IWG1 891 aa25.7■■□□□ 1.7
SOX2-201ENST00000325404 DMRT2Q9Y5R5 561 aa25.7■■□□□ 1.7
SOX2-201ENST00000325404 NEFMP07197 916 aa25.68■■□□□ 1.7
SOX2-201ENST00000325404 SLC12A5Q9H2X9 1139 aa25.67■■□□□ 1.7
SOX2-201ENST00000325404 ARHGEF28Q8N1W1 1705 aaKnown RBP25.66■■□□□ 1.7
SOX2-201ENST00000325404 RIMS2Q9UQ26 1411 aa25.66■■□□□ 1.7
SOX2-201ENST00000325404 TNRQ92752 1358 aa25.66■■□□□ 1.7
SOX2-201ENST00000325404 CFAP53Q96M91 514 aa25.65■■□□□ 1.7
SOX2-201ENST00000325404 SENP3Q9H4L4 574 aaPredicted RBP25.65■■□□□ 1.7
SOX2-201ENST00000325404 LAS1LQ9Y4W2 734 aaKnown RBP25.65■■□□□ 1.7
SOX2-201ENST00000325404 ANKRD36BQ8N2N9 1353 aa25.64■■□□□ 1.7
SOX2-201ENST00000325404 CLUAP1Q96AJ1 413 aa25.64■■□□□ 1.69
SOX2-201ENST00000325404 EVC2Q86UK5 1308 aa25.64■■□□□ 1.69
SOX2-201ENST00000325404 MAPK8IP3Q9UPT6 1336 aa25.63■■□□□ 1.69
SOX2-201ENST00000325404 ALKQ9UM73 1620 aa25.63■■□□□ 1.69
SOX2-201ENST00000325404 PRKCSHP14314 528 aaPredicted RBP25.61■■□□□ 1.69
SOX2-201ENST00000325404 TCP11L2Q8N4U5 519 aa25.61■■□□□ 1.69
SOX2-201ENST00000325404 STK26Q9P289 416 aa25.61■■□□□ 1.69
SOX2-201ENST00000325404 RARSP54136 660 aaKnown RBP25.6■■□□□ 1.69
SOX2-201ENST00000325404 DAXXQ9UER7 740 aaPredicted RBP25.6■■□□□ 1.69
SOX2-201ENST00000325404 YTHDC2Q9H6S0 1430 aaKnown RBP25.6■■□□□ 1.69
SOX2-201ENST00000325404 VIRMAQ69YN4 1812 aaKnown RBP25.6■■□□□ 1.69
SOX2-201ENST00000325404 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.6■■□□□ 1.69
SOX2-201ENST00000325404 TULP4Q9NRJ4 1543 aa25.59■■□□□ 1.69
SOX2-201ENST00000325404 IGHDP01880 384 aa25.59■■□□□ 1.69
SOX2-201ENST00000325404 RGS3P49796 1198 aa25.58■■□□□ 1.69
SOX2-201ENST00000325404 CANXP27824 592 aaKnown RBP25.58■■□□□ 1.68
SOX2-201ENST00000325404 MTHFSP49914 203 aa25.58■■□□□ 1.68
SOX2-201ENST00000325404 PMFBP1Q8TBY8 1022 aa25.56■■□□□ 1.68
SOX2-201ENST00000325404 PTPRMP28827 1452 aa25.56■■□□□ 1.68
SOX2-201ENST00000325404 ADGRB2O60241 1585 aa25.55■■□□□ 1.68
SOX2-201ENST00000325404 HDGFP51858 240 aaKnown RBP25.55■■□□□ 1.68
SOX2-201ENST00000325404 CT47B1P0C2W7 299 aaPredicted RBP25.55■■□□□ 1.68
SOX2-201ENST00000325404 MYH16Q9H6N6 1097 aa25.54■■□□□ 1.68
SOX2-201ENST00000325404 SAFB2Q14151 953 aaKnown RBP eCLIP25.54■■□□□ 1.68
SOX2-201ENST00000325404 PANK1Q8TE04 598 aa25.53■■□□□ 1.68
SOX2-201ENST00000325404 COG6Q9Y2V7 657 aa25.53■■□□□ 1.68
SOX2-201ENST00000325404 POGKQ9P215 609 aa25.52■■□□□ 1.68
SOX2-201ENST00000325404 PRAM1Q96QH2 718 aa25.52■■□□□ 1.68
SOX2-201ENST00000325404 ABCC11Q96J66 1382 aa25.5■■□□□ 1.67
SOX2-201ENST00000325404 NLRP1Q9C000 1473 aa25.5■■□□□ 1.67
SOX2-201ENST00000325404 TNNT2P45379 298 aaPredicted RBP25.5■■□□□ 1.67
SOX2-201ENST00000325404 UBR1Q8IWV7 1749 aa25.49■■□□□ 1.67
SOX2-201ENST00000325404 TMEM2Q9UHN6 1383 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms