RNA–Protein interactions for RNA: ENST00000325222.8

CUL1-201, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 3,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-201ENST00000325222 GZF1Q9H116 711 aaPredicted RBP18.57■□□□□ 0.56
CUL1-201ENST00000325222 PLCH2O75038 1416 aa18.56■□□□□ 0.56
CUL1-201ENST00000325222 MCM4P33991 863 aa18.56■□□□□ 0.56
CUL1-201ENST00000325222 AFAP1Q8N556 730 aa18.56■□□□□ 0.56
CUL1-201ENST00000325222 UGGT1Q9NYU2 1555 aa18.55■□□□□ 0.56
CUL1-201ENST00000325222 RUNDC1Q96C34 613 aa18.55■□□□□ 0.56
CUL1-201ENST00000325222 STAC3Q96MF2 364 aa18.55■□□□□ 0.56
CUL1-201ENST00000325222 ABCA6Q8N139 1617 aa18.54■□□□□ 0.56
CUL1-201ENST00000325222 ABCC1P33527 1531 aa18.54■□□□□ 0.56
CUL1-201ENST00000325222 HSP90AA2PQ14568 343 aaPredicted RBP18.54■□□□□ 0.56
CUL1-201ENST00000325222 UPF2Q9HAU5 1272 aaKnown RBP18.54■□□□□ 0.56
CUL1-201ENST00000325222 KIAA1210Q9ULL0 1709 aa18.54■□□□□ 0.56
CUL1-201ENST00000325222 ERCC6L2Q5T890 1561 aa18.53■□□□□ 0.56
CUL1-201ENST00000325222 ZMYM3Q14202 1370 aa18.53■□□□□ 0.56
CUL1-201ENST00000325222 EFCAB2Q5VUJ9 269 aa18.53■□□□□ 0.56
CUL1-201ENST00000325222 NSD3Q9BZ95 1437 aa18.52■□□□□ 0.56
CUL1-201ENST00000325222 MORC1Q86VD1 984 aa18.52■□□□□ 0.55
CUL1-201ENST00000325222 SLC12A5Q9H2X9 1139 aa18.52■□□□□ 0.55
CUL1-201ENST00000325222 RWDD1Q9H446 243 aaPredicted RBP18.52■□□□□ 0.55
CUL1-201ENST00000325222 SPAG9O60271 1321 aaKnown RBP18.51■□□□□ 0.55
CUL1-201ENST00000325222 GOLGA6L3A6NEY3 463 aa18.51■□□□□ 0.55
CUL1-201ENST00000325222 WDR63Q8IWG1 891 aa18.51■□□□□ 0.55
CUL1-201ENST00000325222 MAP3K4Q9Y6R4 1608 aa18.5■□□□□ 0.55
CUL1-201ENST00000325222 MVPQ14764 893 aaKnown RBP18.5■□□□□ 0.55
CUL1-201ENST00000325222 MFAP1P55081 439 aaKnown RBP18.5■□□□□ 0.55
CUL1-201ENST00000325222 AAMPQ13685 434 aa18.5■□□□□ 0.55
CUL1-201ENST00000325222 C22orf23Q9BZE7 217 aa18.5■□□□□ 0.55
CUL1-201ENST00000325222 ZNF692Q9BU19 519 aaPredicted RBP18.49■□□□□ 0.55
CUL1-201ENST00000325222 MTHFSP49914 203 aa18.48■□□□□ 0.55
CUL1-201ENST00000325222 TRAK2O60296 914 aa18.48■□□□□ 0.55
CUL1-201ENST00000325222 ZFYVE16Q7Z3T8 1539 aa18.48■□□□□ 0.55
CUL1-201ENST00000325222 TET3O43151 1660 aa18.48■□□□□ 0.55
CUL1-201ENST00000325222 DEPDC5O75140 1603 aa18.48■□□□□ 0.55
CUL1-201ENST00000325222 CHMP5Q9NZZ3 219 aa18.46■□□□□ 0.55
CUL1-201ENST00000325222 MYOM2P54296 1465 aa18.46■□□□□ 0.55
CUL1-201ENST00000325222 TSR2Q969E8 191 aaKnown RBP18.46■□□□□ 0.55
CUL1-201ENST00000325222 HSP90AA1P07900 732 aaKnown RBP18.46■□□□□ 0.54
CUL1-201ENST00000325222 KANK1Q14678 1352 aa18.46■□□□□ 0.54
CUL1-201ENST00000325222 ZNF518AQ6AHZ1 1483 aa18.45■□□□□ 0.54
CUL1-201ENST00000325222 CCDC27Q2M243 656 aa18.45■□□□□ 0.54
CUL1-201ENST00000325222 VWDEQ8N2E2 1590 aa18.45■□□□□ 0.54
CUL1-201ENST00000325222 SHROOM2Q13796 1616 aa18.44■□□□□ 0.54
CUL1-201ENST00000325222 DZIP1LQ8IYY4 767 aaKnown RBP18.44■□□□□ 0.54
CUL1-201ENST00000325222 TRAK1Q9UPV9 953 aa18.44■□□□□ 0.54
CUL1-201ENST00000325222 MYO3AQ8NEV4 1616 aa18.44■□□□□ 0.54
CUL1-201ENST00000325222 SBNO2Q9Y2G9 1366 aa18.43■□□□□ 0.54
CUL1-201ENST00000325222 KIF3BO15066 747 aa18.43■□□□□ 0.54
CUL1-201ENST00000325222 CLCN1P35523 988 aa18.43■□□□□ 0.54
CUL1-201ENST00000325222 ZKSCAN2Q63HK3 967 aa18.43■□□□□ 0.54
CUL1-201ENST00000325222 DDIT3P35638 169 aa18.42■□□□□ 0.54
CUL1-201ENST00000325222 MROH2AA6NES4 1674 aa18.42■□□□□ 0.54
CUL1-201ENST00000325222 SLC24A1O60721 1099 aa18.42■□□□□ 0.54
CUL1-201ENST00000325222 TRIM27P14373 513 aa18.42■□□□□ 0.54
CUL1-201ENST00000325222 A0A0U1RQG5 324 aaPredicted RBP18.41■□□□□ 0.54
CUL1-201ENST00000325222 NRXN1Q9ULB1 1477 aa18.41■□□□□ 0.54
CUL1-201ENST00000325222 NEURL4Q96JN8 1562 aa18.41■□□□□ 0.54
CUL1-201ENST00000325222 FTSJ3Q8IY81 847 aaKnown RBP18.41■□□□□ 0.54
CUL1-201ENST00000325222 PNNQ9H307 717 aaKnown RBP18.41■□□□□ 0.54
CUL1-201ENST00000325222 IFT172Q9UG01 1749 aa18.4■□□□□ 0.54
CUL1-201ENST00000325222 MYH16Q9H6N6 1097 aa18.4■□□□□ 0.54
CUL1-201ENST00000325222 ERBB4Q15303 1308 aa18.4■□□□□ 0.54
CUL1-201ENST00000325222 EXOSC9Q06265 439 aaKnown RBP18.4■□□□□ 0.54
CUL1-201ENST00000325222 ZCCHC11Q5TAX3 1644 aaKnown RBP18.39■□□□□ 0.54
CUL1-201ENST00000325222 HDAC1Q13547 482 aaPredicted RBP18.39■□□□□ 0.54
CUL1-201ENST00000325222 CHD1O14646 1710 aa18.39■□□□□ 0.53
CUL1-201ENST00000325222 NOS1P29475 1434 aa18.39■□□□□ 0.53
CUL1-201ENST00000325222 U2AF1L5P0DN76 240 aaPredicted RBP18.39■□□□□ 0.53
CUL1-201ENST00000325222 U2AF1Q01081 240 aaKnown RBP eCLIP18.39■□□□□ 0.53
CUL1-201ENST00000325222 SSH1Q8WYL5 1049 aa18.39■□□□□ 0.53
CUL1-201ENST00000325222 MROH1Q8NDA8 1641 aa18.39■□□□□ 0.53
CUL1-201ENST00000325222 NCOA3Q9Y6Q9 1424 aa18.39■□□□□ 0.53
CUL1-201ENST00000325222 TMEM132EQ6IEE7 984 aa18.38■□□□□ 0.53
CUL1-201ENST00000325222 MRE11P49959 708 aa18.38■□□□□ 0.53
CUL1-201ENST00000325222 GAS2L3Q86XJ1 694 aa18.38■□□□□ 0.53
CUL1-201ENST00000325222 GRPEL1Q9HAV7 217 aa18.38■□□□□ 0.53
CUL1-201ENST00000325222 SMC4Q9NTJ3 1288 aa18.38■□□□□ 0.53
CUL1-201ENST00000325222 SMC5Q8IY18 1101 aa18.37■□□□□ 0.53
CUL1-201ENST00000325222 ITPRIPQ8IWB1 547 aa18.37■□□□□ 0.53
CUL1-201ENST00000325222 CD109Q6YHK3 1445 aa18.36■□□□□ 0.53
CUL1-201ENST00000325222 ADGRB2O60241 1585 aa18.36■□□□□ 0.53
CUL1-201ENST00000325222 TRIM35Q9UPQ4 493 aa18.36■□□□□ 0.53
CUL1-201ENST00000325222 ZC3H13Q5T200 1668 aaKnown RBP18.35■□□□□ 0.53
CUL1-201ENST00000325222 RRP9O43818 475 aaKnown RBP18.35■□□□□ 0.53
CUL1-201ENST00000325222 HSCBQ8IWL3 235 aa18.35■□□□□ 0.53
CUL1-201ENST00000325222 TMEM57Q8N5G2 664 aa18.35■□□□□ 0.53
CUL1-201ENST00000325222 NOB1Q9ULX3 412 aaKnown RBP18.35■□□□□ 0.53
CUL1-201ENST00000325222 KIF1BO60333 1816 aa18.35■□□□□ 0.53
CUL1-201ENST00000325222 TNPO1Q92973 898 aaKnown RBP18.34■□□□□ 0.53
CUL1-201ENST00000325222 CFAP53Q96M91 514 aa18.34■□□□□ 0.53
CUL1-201ENST00000325222 ATP7AQ04656 1500 aa18.34■□□□□ 0.53
CUL1-201ENST00000325222 PLEKHF1Q96S99 279 aa18.34■□□□□ 0.53
CUL1-201ENST00000325222 QRICH2Q9H0J4 1663 aa18.34■□□□□ 0.53
CUL1-201ENST00000325222 ATF7IPQ6VMQ6 1270 aa18.34■□□□□ 0.53
CUL1-201ENST00000325222 RBM25P49756 843 aaKnown RBP18.33■□□□□ 0.53
CUL1-201ENST00000325222 ZBTB40Q9NUA8 1239 aa18.33■□□□□ 0.53
CUL1-201ENST00000325222 CD2BP2O95400 341 aaKnown RBP18.33■□□□□ 0.52
CUL1-201ENST00000325222 KIF2CQ99661 725 aa18.33■□□□□ 0.52
CUL1-201ENST00000325222 ADGRB1O14514 1584 aa18.32■□□□□ 0.52
CUL1-201ENST00000325222 INO80Q9ULG1 1556 aaPredicted RBP18.32■□□□□ 0.52
CUL1-201ENST00000325222 CHGAP10645 457 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms