RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 XRN1Q8IZH2 1706 aaKnown RBP21.22■□□□□ 0.99
PRPF3-201ENST00000324862 FAM135BQ49AJ0 1406 aa21.22■□□□□ 0.99
PRPF3-201ENST00000324862 SIRT1Q96EB6 747 aa21.2■□□□□ 0.99
PRPF3-201ENST00000324862 CHD2O14647 1828 aaKnown RBP21.2■□□□□ 0.98
PRPF3-201ENST00000324862 PTCH1Q13635 1447 aa21.19■□□□□ 0.98
PRPF3-201ENST00000324862 NUTM2FA1L443 756 aa21.19■□□□□ 0.98
PRPF3-201ENST00000324862 SRPK2P78362 688 aaKnown RBP21.19■□□□□ 0.98
PRPF3-201ENST00000324862 CDK19Q9BWU1 502 aa21.19■□□□□ 0.98
PRPF3-201ENST00000324862 EVC2Q86UK5 1308 aa21.19■□□□□ 0.98
PRPF3-201ENST00000324862 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.18■□□□□ 0.98
PRPF3-201ENST00000324862 ZNF335Q9H4Z2 1342 aaPredicted RBP21.17■□□□□ 0.98
PRPF3-201ENST00000324862 AEBP2Q6ZN18 517 aaPredicted RBP21.16■□□□□ 0.98
PRPF3-201ENST00000324862 CNGB1Q14028 1251 aaPredicted RBP21.16■□□□□ 0.98
PRPF3-201ENST00000324862 WASLO00401 505 aaPredicted RBP21.15■□□□□ 0.98
PRPF3-201ENST00000324862 TMC1Q8TDI8 760 aa21.15■□□□□ 0.98
PRPF3-201ENST00000324862 SLC12A5Q9H2X9 1139 aa21.15■□□□□ 0.98
PRPF3-201ENST00000324862 STRCP1A6NGW2 1772 aa21.14■□□□□ 0.98
PRPF3-201ENST00000324862 CDCA8Q53HL2 280 aa21.14■□□□□ 0.97
PRPF3-201ENST00000324862 PROSER2Q86WR7 435 aaPredicted RBP21.13■□□□□ 0.97
PRPF3-201ENST00000324862 PANK3Q9H999 370 aa21.13■□□□□ 0.97
PRPF3-201ENST00000324862 NWD1Q149M9 1564 aa21.12■□□□□ 0.97
PRPF3-201ENST00000324862 SLC24A1O60721 1099 aa21.12■□□□□ 0.97
PRPF3-201ENST00000324862 PRR36Q9H6K5 1346 aa21.1■□□□□ 0.97
PRPF3-201ENST00000324862 C14orf37Q86TY3 774 aa21.1■□□□□ 0.97
PRPF3-201ENST00000324862 MYOM1P52179 1685 aa21.09■□□□□ 0.97
PRPF3-201ENST00000324862 MIER1Q8N108 512 aa21.08■□□□□ 0.97
PRPF3-201ENST00000324862 TMEM94Q12767 1356 aa21.08■□□□□ 0.97
PRPF3-201ENST00000324862 CABP1Q9NZU7 370 aa21.07■□□□□ 0.96
PRPF3-201ENST00000324862 NUDT16Q96DE0 195 aaKnown RBP21.07■□□□□ 0.96
PRPF3-201ENST00000324862 DMRT2Q9Y5R5 561 aa21.06■□□□□ 0.96
PRPF3-201ENST00000324862 NALCNQ8IZF0 1738 aa21.06■□□□□ 0.96
PRPF3-201ENST00000324862 NKTRP30414 1462 aaKnown RBP21.05■□□□□ 0.96
PRPF3-201ENST00000324862 CARD14Q9BXL6 1004 aa21.05■□□□□ 0.96
PRPF3-201ENST00000324862 ADGRB2O60241 1585 aa21.04■□□□□ 0.96
PRPF3-201ENST00000324862 PER1O15534 1290 aaPredicted RBP21.04■□□□□ 0.96
PRPF3-201ENST00000324862 ADGRL3Q9HAR2 1447 aa21.03■□□□□ 0.96
PRPF3-201ENST00000324862 ATP7BP35670 1465 aa21.03■□□□□ 0.96
PRPF3-201ENST00000324862 ATAD2Q6PL18 1390 aa21.03■□□□□ 0.96
PRPF3-201ENST00000324862 PUS7Q96PZ0 661 aaKnown RBP21.02■□□□□ 0.96
PRPF3-201ENST00000324862 PPIP5K1Q6PFW1 1433 aa21■□□□□ 0.95
PRPF3-201ENST00000324862 CCDC61Q9Y6R9 512 aa21■□□□□ 0.95
PRPF3-201ENST00000324862 LRRC7Q96NW7 1537 aa20.99■□□□□ 0.95
PRPF3-201ENST00000324862 PMFBP1Q8TBY8 1022 aa20.99■□□□□ 0.95
PRPF3-201ENST00000324862 A0A1W2PP64 1363 aa20.99■□□□□ 0.95
PRPF3-201ENST00000324862 CD163L1Q9NR16 1453 aa20.99■□□□□ 0.95
PRPF3-201ENST00000324862 USP32Q8NFA0 1604 aa20.99■□□□□ 0.95
PRPF3-201ENST00000324862 CC2D1BQ5T0F9 858 aaKnown RBP20.97■□□□□ 0.95
PRPF3-201ENST00000324862 C19orf44Q9H6X5 657 aa20.97■□□□□ 0.95
PRPF3-201ENST00000324862 ANP32CO43423 234 aa20.96■□□□□ 0.95
PRPF3-201ENST00000324862 ANKRD36BQ8N2N9 1353 aa20.95■□□□□ 0.94
PRPF3-201ENST00000324862 CDC42BPGQ6DT37 1551 aa20.95■□□□□ 0.94
PRPF3-201ENST00000324862 NSD3Q9BZ95 1437 aa20.95■□□□□ 0.94
PRPF3-201ENST00000324862 KNSTRNQ9Y448 316 aa20.95■□□□□ 0.94
PRPF3-201ENST00000324862 RGPD8O14715 1765 aaPredicted RBP20.94■□□□□ 0.94
PRPF3-201ENST00000324862 ORAI2Q96SN7 254 aa20.94■□□□□ 0.94
PRPF3-201ENST00000324862 AMER1Q5JTC6 1135 aaPredicted RBP20.93■□□□□ 0.94
PRPF3-201ENST00000324862 PRKRIP1Q9H875 184 aaPredicted RBP20.93■□□□□ 0.94
PRPF3-201ENST00000324862 FMN2Q9NZ56 1722 aa20.93■□□□□ 0.94
PRPF3-201ENST00000324862 XIRP1Q702N8 1843 aaKnown RBP20.93■□□□□ 0.94
PRPF3-201ENST00000324862 ACEP12821 1306 aa20.93■□□□□ 0.94
PRPF3-201ENST00000324862 ESCO1Q5FWF5 840 aa20.92■□□□□ 0.94
PRPF3-201ENST00000324862 TERF2IPQ9NYB0 399 aa20.92■□□□□ 0.94
PRPF3-201ENST00000324862 NINLQ9Y2I6 1382 aa20.92■□□□□ 0.94
PRPF3-201ENST00000324862 ATF3P18847 181 aa20.91■□□□□ 0.94
PRPF3-201ENST00000324862 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.9■□□□□ 0.94
PRPF3-201ENST00000324862 MSH6P52701 1360 aa20.9■□□□□ 0.94
PRPF3-201ENST00000324862 HDGFL2Q7Z4V5 671 aaPredicted RBP20.9■□□□□ 0.94
PRPF3-201ENST00000324862 PLEKHG3A1L390 1219 aa20.89■□□□□ 0.94
PRPF3-201ENST00000324862 CPSF1Q10570 1443 aaKnown RBP20.89■□□□□ 0.93
PRPF3-201ENST00000324862 TOPAZ1Q8N9V7 1692 aa20.89■□□□□ 0.93
PRPF3-201ENST00000324862 ANKARQ7Z5J8 1434 aa20.89■□□□□ 0.93
PRPF3-201ENST00000324862 KTN1Q86UP2 1357 aaKnown RBP20.89■□□□□ 0.93
PRPF3-201ENST00000324862 LTBP4Q8N2S1 1624 aa20.88■□□□□ 0.93
PRPF3-201ENST00000324862 NGDNQ8NEJ9 315 aaKnown RBP20.88■□□□□ 0.93
PRPF3-201ENST00000324862 NCOA3Q9Y6Q9 1424 aa20.88■□□□□ 0.93
PRPF3-201ENST00000324862 MST1RQ04912 1400 aa20.87■□□□□ 0.93
PRPF3-201ENST00000324862 PHF8Q9UPP1 1060 aa20.87■□□□□ 0.93
PRPF3-201ENST00000324862 C1orf167Q5SNV9 1468 aa20.87■□□□□ 0.93
PRPF3-201ENST00000324862 CCDC184Q52MB2 194 aa20.86■□□□□ 0.93
PRPF3-201ENST00000324862 XPCQ01831 940 aaPredicted RBP20.86■□□□□ 0.93
PRPF3-201ENST00000324862 CADPS2Q86UW7 1296 aa20.86■□□□□ 0.93
PRPF3-201ENST00000324862 DDX17Q92841 729 aaKnown RBP20.86■□□□□ 0.93
PRPF3-201ENST00000324862 GGNBP2Q9H3C7 697 aa20.85■□□□□ 0.93
PRPF3-201ENST00000324862 FOXO3O43524 673 aa20.85■□□□□ 0.93
PRPF3-201ENST00000324862 ZRANB1Q9UGI0 708 aa20.85■□□□□ 0.93
PRPF3-201ENST00000324862 FYB1O15117 783 aa20.83■□□□□ 0.93
PRPF3-201ENST00000324862 TNNT2P45379 298 aaPredicted RBP20.83■□□□□ 0.93
PRPF3-201ENST00000324862 NME9Q86XW9 330 aa20.83■□□□□ 0.93
PRPF3-201ENST00000324862 DCCP43146 1447 aa20.83■□□□□ 0.92
PRPF3-201ENST00000324862 CGNL1Q0VF96 1302 aa20.82■□□□□ 0.92
PRPF3-201ENST00000324862 POLR3AO14802 1390 aaPredicted RBP20.82■□□□□ 0.92
PRPF3-201ENST00000324862 PARD3Q8TEW0 1356 aa20.81■□□□□ 0.92
PRPF3-201ENST00000324862 USP6P35125 1406 aa20.81■□□□□ 0.92
PRPF3-201ENST00000324862 ZNF692Q9BU19 519 aaPredicted RBP20.8■□□□□ 0.92
PRPF3-201ENST00000324862 SLAIN2Q9P270 581 aa20.8■□□□□ 0.92
PRPF3-201ENST00000324862 ITSN1Q15811 1721 aa20.8■□□□□ 0.92
PRPF3-201ENST00000324862 FBLN1P23142 703 aa20.79■□□□□ 0.92
PRPF3-201ENST00000324862 TTC21BQ7Z4L5 1316 aa20.79■□□□□ 0.92
PRPF3-201ENST00000324862 EDC4Q6P2E9 1401 aaKnown RBP20.79■□□□□ 0.92
PRPF3-201ENST00000324862 AKAP12Q02952 1782 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms