RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 MYOM1P52179 1685 aa15.4■□□□□ 0.06
NLRC3-201ENST00000324659 FAM69CQ0P6D2 419 aa15.39■□□□□ 0.05
NLRC3-201ENST00000324659 ERVK-7P63135 1459 aa15.39■□□□□ 0.05
NLRC3-201ENST00000324659 CFAP65Q6ZU64 1925 aaKnown RBP15.39■□□□□ 0.05
NLRC3-201ENST00000324659 RARSP54136 660 aaKnown RBP15.39■□□□□ 0.05
NLRC3-201ENST00000324659 BECN1Q14457 450 aa15.39■□□□□ 0.05
NLRC3-201ENST00000324659 HSP90AA2PQ14568 343 aaPredicted RBP15.39■□□□□ 0.05
NLRC3-201ENST00000324659 NSD3Q9BZ95 1437 aa15.39■□□□□ 0.05
NLRC3-201ENST00000324659 MTHFSP49914 203 aa15.39■□□□□ 0.05
NLRC3-201ENST00000324659 TRPM2O94759 1503 aa15.38■□□□□ 0.05
NLRC3-201ENST00000324659 KDM5AP29375 1690 aaKnown RBP15.38■□□□□ 0.05
NLRC3-201ENST00000324659 MAPK8IP3Q9UPT6 1336 aa15.38■□□□□ 0.05
NLRC3-201ENST00000324659 RRAGDQ9NQL2 400 aaPredicted RBP15.38■□□□□ 0.05
NLRC3-201ENST00000324659 PDZRN3Q9UPQ7 1066 aa15.38■□□□□ 0.05
NLRC3-201ENST00000324659 CD109Q6YHK3 1445 aa15.37■□□□□ 0.05
NLRC3-201ENST00000324659 UPF2Q9HAU5 1272 aaKnown RBP15.37■□□□□ 0.05
NLRC3-201ENST00000324659 SPHKAPQ2M3C7 1700 aa15.37■□□□□ 0.05
NLRC3-201ENST00000324659 ABCC1P33527 1531 aa15.37■□□□□ 0.05
NLRC3-201ENST00000324659 RUNDC1Q96C34 613 aa15.37■□□□□ 0.05
NLRC3-201ENST00000324659 CLASP1Q7Z460 1538 aa15.37■□□□□ 0.05
NLRC3-201ENST00000324659 U2SURPO15042 1029 aaKnown RBP15.36■□□□□ 0.05
NLRC3-201ENST00000324659 U2AF1L5P0DN76 240 aaPredicted RBP15.36■□□□□ 0.05
NLRC3-201ENST00000324659 U2AF1Q01081 240 aaKnown RBP eCLIP15.36■□□□□ 0.05
NLRC3-201ENST00000324659 CABP2Q9NPB3 220 aa15.36■□□□□ 0.05
NLRC3-201ENST00000324659 NPC1L1Q9UHC9 1359 aa15.36■□□□□ 0.05
NLRC3-201ENST00000324659 MINK1Q8N4C8 1332 aaPredicted RBP15.36■□□□□ 0.05
NLRC3-201ENST00000324659 TSR2Q969E8 191 aaKnown RBP15.35■□□□□ 0.05
NLRC3-201ENST00000324659 PNNQ9H307 717 aaKnown RBP15.35■□□□□ 0.05
NLRC3-201ENST00000324659 FTSJ3Q8IY81 847 aaKnown RBP15.34■□□□□ 0.05
NLRC3-201ENST00000324659 GZF1Q9H116 711 aaPredicted RBP15.34■□□□□ 0.05
NLRC3-201ENST00000324659 HSP90AA1P07900 732 aaKnown RBP15.34■□□□□ 0.05
NLRC3-201ENST00000324659 PMFBP1Q8TBY8 1022 aa15.34■□□□□ 0.05
NLRC3-201ENST00000324659 CEP152O94986 1710 aa15.34■□□□□ 0.05
NLRC3-201ENST00000324659 PTPRTO14522 1441 aa15.33■□□□□ 0.05
NLRC3-201ENST00000324659 ZCCHC11Q5TAX3 1644 aaKnown RBP15.33■□□□□ 0.04
NLRC3-201ENST00000324659 MFAP1P55081 439 aaKnown RBP15.33■□□□□ 0.04
NLRC3-201ENST00000324659 STAC3Q96MF2 364 aa15.33■□□□□ 0.04
NLRC3-201ENST00000324659 FBXO31Q5XUX0 539 aaPredicted RBP15.32■□□□□ 0.04
NLRC3-201ENST00000324659 NOS1P29475 1434 aa15.32■□□□□ 0.04
NLRC3-201ENST00000324659 ZFYVE16Q7Z3T8 1539 aa15.31■□□□□ 0.04
NLRC3-201ENST00000324659 POLR3AO14802 1390 aaPredicted RBP15.31■□□□□ 0.04
NLRC3-201ENST00000324659 CFAP53Q96M91 514 aa15.31■□□□□ 0.04
NLRC3-201ENST00000324659 TBC1D2Q9BYX2 928 aa15.31■□□□□ 0.04
NLRC3-201ENST00000324659 NUTM2FA1L443 756 aa15.31■□□□□ 0.04
NLRC3-201ENST00000324659 RWDD1Q9H446 243 aaPredicted RBP15.3■□□□□ 0.04
NLRC3-201ENST00000324659 ABCA6Q8N139 1617 aa15.3■□□□□ 0.04
NLRC3-201ENST00000324659 IDI1Q13907 227 aa15.3■□□□□ 0.04
NLRC3-201ENST00000324659 SMC4Q9NTJ3 1288 aa15.29■□□□□ 0.04
NLRC3-201ENST00000324659 ITPRIPQ8IWB1 547 aa15.29■□□□□ 0.04
NLRC3-201ENST00000324659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.29■□□□□ 0.04
NLRC3-201ENST00000324659 PODXL2Q9NZ53 605 aa15.29■□□□□ 0.04
NLRC3-201ENST00000324659 VGFO15240 615 aaPredicted RBP15.28■□□□□ 0.04
NLRC3-201ENST00000324659 NGEFQ8N5V2 710 aa15.28■□□□□ 0.04
NLRC3-201ENST00000324659 GGNBP2Q9H3C7 697 aa15.28■□□□□ 0.04
NLRC3-201ENST00000324659 TBC1D32Q96NH3 1257 aa15.28■□□□□ 0.04
NLRC3-201ENST00000324659 SOX12O15370 315 aa15.27■□□□□ 0.04
NLRC3-201ENST00000324659 MYH16Q9H6N6 1097 aa15.27■□□□□ 0.04
NLRC3-201ENST00000324659 NINLQ9Y2I6 1382 aa15.27■□□□□ 0.03
NLRC3-201ENST00000324659 MAP3K4Q9Y6R4 1608 aa15.27■□□□□ 0.03
NLRC3-201ENST00000324659 EXOSC9Q06265 439 aaKnown RBP15.27■□□□□ 0.03
NLRC3-201ENST00000324659 ATP7AQ04656 1500 aa15.26■□□□□ 0.03
NLRC3-201ENST00000324659 MVPQ14764 893 aaKnown RBP15.26■□□□□ 0.03
NLRC3-201ENST00000324659 ZKSCAN2Q63HK3 967 aa15.26■□□□□ 0.03
NLRC3-201ENST00000324659 DZIP1LQ8IYY4 767 aaKnown RBP15.26■□□□□ 0.03
NLRC3-201ENST00000324659 TET3O43151 1660 aa15.26■□□□□ 0.03
NLRC3-201ENST00000324659 WDR63Q8IWG1 891 aa15.26■□□□□ 0.03
NLRC3-201ENST00000324659 RTEL1-TNFRSF6BF6WH68 1400 aa15.25■□□□□ 0.03
NLRC3-201ENST00000324659 NLRP1Q9C000 1473 aa15.25■□□□□ 0.03
NLRC3-201ENST00000324659 SHROOM2Q13796 1616 aa15.24■□□□□ 0.03
NLRC3-201ENST00000324659 ANTXR1Q9H6X2 564 aa15.24■□□□□ 0.03
NLRC3-201ENST00000324659 L1TD1Q5T7N2 865 aaKnown RBP15.23■□□□□ 0.03
NLRC3-201ENST00000324659 C22orf23Q9BZE7 217 aa15.23■□□□□ 0.03
NLRC3-201ENST00000324659 TRIM27P14373 513 aa15.23■□□□□ 0.03
NLRC3-201ENST00000324659 PRAM1Q96QH2 718 aa15.23■□□□□ 0.03
NLRC3-201ENST00000324659 VIRMAQ69YN4 1812 aaKnown RBP15.22■□□□□ 0.03
NLRC3-201ENST00000324659 FBLN1P23142 703 aa15.22■□□□□ 0.03
NLRC3-201ENST00000324659 SSH1Q8WYL5 1049 aa15.22■□□□□ 0.03
NLRC3-201ENST00000324659 MROH2AA6NES4 1674 aa15.21■□□□□ 0.03
NLRC3-201ENST00000324659 KIF1BO60333 1816 aa15.21■□□□□ 0.03
NLRC3-201ENST00000324659 PANK2Q9BZ23 570 aa15.21■□□□□ 0.03
NLRC3-201ENST00000324659 EVC2Q86UK5 1308 aa15.21■□□□□ 0.03
NLRC3-201ENST00000324659 SHPRHQ149N8 1683 aa15.21■□□□□ 0.03
NLRC3-201ENST00000324659 UHRF1BP1LA0JNW5 1464 aa15.21■□□□□ 0.03
NLRC3-201ENST00000324659 C14orf93Q9H972 538 aaKnown RBP15.21■□□□□ 0.02
NLRC3-201ENST00000324659 NOB1Q9ULX3 412 aaKnown RBP15.21■□□□□ 0.02
NLRC3-201ENST00000324659 MYOM2P54296 1465 aa15.2■□□□□ 0.02
NLRC3-201ENST00000324659 PHF23Q9BUL5 403 aaPredicted RBP15.2■□□□□ 0.02
NLRC3-201ENST00000324659 LNPKQ9C0E8 428 aa15.19■□□□□ 0.02
NLRC3-201ENST00000324659 FOXD4L1Q9NU39 408 aa15.19■□□□□ 0.02
NLRC3-201ENST00000324659 GOLGA6L3A6NEY3 463 aa15.19■□□□□ 0.02
NLRC3-201ENST00000324659 DEPDC5O75140 1603 aa15.19■□□□□ 0.02
NLRC3-201ENST00000324659 TMEM57Q8N5G2 664 aa15.19■□□□□ 0.02
NLRC3-201ENST00000324659 IQSEC2Q5JU85 1478 aa15.19■□□□□ 0.02
NLRC3-201ENST00000324659 ZNF518AQ6AHZ1 1483 aa15.19■□□□□ 0.02
NLRC3-201ENST00000324659 A0A0U1RQG5 324 aaPredicted RBP15.18■□□□□ 0.02
NLRC3-201ENST00000324659 KIAA1210Q9ULL0 1709 aa15.18■□□□□ 0.02
NLRC3-201ENST00000324659 WAPLQ7Z5K2 1190 aa15.18■□□□□ 0.02
NLRC3-201ENST00000324659 MCM4P33991 863 aa15.18■□□□□ 0.02
NLRC3-201ENST00000324659 TMPOP42166 694 aaKnown RBP15.17■□□□□ 0.02
NLRC3-201ENST00000324659 RIPK4P57078 832 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms