RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CFAP65Q6ZU64 1925 aaKnown RBP11.12□□□□□ -0.63
CSTF3-201ENST00000323959 RSPH4AQ5TD94 716 aa11.11□□□□□ -0.63
CSTF3-201ENST00000323959 COL13A1Q5TAT6 717 aaPredicted RBP11.11□□□□□ -0.63
CSTF3-201ENST00000323959 CCNB3Q8WWL7 1395 aa11.11□□□□□ -0.63
CSTF3-201ENST00000323959 BCANQ96GW7 911 aa11.11□□□□□ -0.63
CSTF3-201ENST00000323959 MAP3K5Q99683 1374 aa11.1□□□□□ -0.63
CSTF3-201ENST00000323959 APLP1P51693 650 aa11.1□□□□□ -0.63
CSTF3-201ENST00000323959 ADGRL3Q9HAR2 1447 aa11.1□□□□□ -0.63
CSTF3-201ENST00000323959 ARHGEF5Q12774 1597 aa11.09□□□□□ -0.63
CSTF3-201ENST00000323959 CASKIN1Q8WXD9 1431 aa11.09□□□□□ -0.63
CSTF3-201ENST00000323959 NOS1P29475 1434 aa11.08□□□□□ -0.64
CSTF3-201ENST00000323959 C1orf167Q5SNV9 1468 aa11.08□□□□□ -0.64
CSTF3-201ENST00000323959 ADAMTS13Q76LX8 1427 aa11.08□□□□□ -0.64
CSTF3-201ENST00000323959 NALCNQ8IZF0 1738 aa11.08□□□□□ -0.64
CSTF3-201ENST00000323959 PLCH1Q4KWH8 1693 aa11.08□□□□□ -0.64
CSTF3-201ENST00000323959 USP32Q8NFA0 1604 aa11.07□□□□□ -0.64
CSTF3-201ENST00000323959 RANGAP1P46060 587 aaPredicted RBP11.07□□□□□ -0.64
CSTF3-201ENST00000323959 RGPD3A6NKT7 1758 aaPredicted RBP11.07□□□□□ -0.64
CSTF3-201ENST00000323959 RGPD4Q7Z3J3 1758 aa11.07□□□□□ -0.64
CSTF3-201ENST00000323959 ABCC5O15440 1437 aa11.07□□□□□ -0.64
CSTF3-201ENST00000323959 CHIC1Q5VXU3 224 aa11.07□□□□□ -0.64
CSTF3-201ENST00000323959 CSRNP3Q8WYN3 585 aa11.07□□□□□ -0.64
CSTF3-201ENST00000323959 RIMS2Q9UQ26 1411 aa11.05□□□□□ -0.64
CSTF3-201ENST00000323959 THSD7AQ9UPZ6 1657 aa11.05□□□□□ -0.64
CSTF3-201ENST00000323959 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.05□□□□□ -0.64
CSTF3-201ENST00000323959 DDX17Q92841 729 aaKnown RBP11.05□□□□□ -0.64
CSTF3-201ENST00000323959 LMTK2Q8IWU2 1503 aa11.04□□□□□ -0.64
CSTF3-201ENST00000323959 ADGRL2O95490 1459 aa11.03□□□□□ -0.64
CSTF3-201ENST00000323959 IDI1Q13907 227 aa11.03□□□□□ -0.64
CSTF3-201ENST00000323959 EEA1Q15075 1411 aa11.03□□□□□ -0.64
CSTF3-201ENST00000323959 DNAJC5GQ8N7S2 189 aa11.03□□□□□ -0.64
CSTF3-201ENST00000323959 JMYQ8N9B5 988 aa11.02□□□□□ -0.64
CSTF3-201ENST00000323959 SYT17Q9BSW7 474 aa11.02□□□□□ -0.64
CSTF3-201ENST00000323959 PXDNQ92626 1479 aa11.02□□□□□ -0.65
CSTF3-201ENST00000323959 NRAPQ86VF7 1730 aa11.01□□□□□ -0.65
CSTF3-201ENST00000323959 PTPRUQ92729 1446 aa11.01□□□□□ -0.65
CSTF3-201ENST00000323959 SLC52A1Q9NWF4 448 aa11.01□□□□□ -0.65
CSTF3-201ENST00000323959 WWC3Q9ULE0 1092 aa11□□□□□ -0.65
CSTF3-201ENST00000323959 AMOTL2Q9Y2J4 779 aa11□□□□□ -0.65
CSTF3-201ENST00000323959 ATP10DQ9P241 1426 aa11□□□□□ -0.65
CSTF3-201ENST00000323959 PTGER2P43116 358 aa10.99□□□□□ -0.65
CSTF3-201ENST00000323959 DUOX2Q9NRD8 1548 aa10.99□□□□□ -0.65
CSTF3-201ENST00000323959 GCC2Q8IWJ2 1684 aa10.99□□□□□ -0.65
CSTF3-201ENST00000323959 FAM196AQ6ZSG2 479 aa10.99□□□□□ -0.65
CSTF3-201ENST00000323959 FHDC1Q9C0D6 1143 aaPredicted RBP10.99□□□□□ -0.65
CSTF3-201ENST00000323959 WDR90Q96KV7 1748 aa10.98□□□□□ -0.65
CSTF3-201ENST00000323959 NPHP3Q7Z494 1330 aa10.98□□□□□ -0.65
CSTF3-201ENST00000323959 MYO5BQ9ULV0 1848 aa10.98□□□□□ -0.65
CSTF3-201ENST00000323959 APBA3O96018 575 aa10.98□□□□□ -0.65
CSTF3-201ENST00000323959 TNS2Q63HR2 1409 aa10.97□□□□□ -0.65
CSTF3-201ENST00000323959 LRPPRCP42704 1394 aaKnown RBP10.95□□□□□ -0.66
CSTF3-201ENST00000323959 CCDC9Q9Y3X0 531 aaKnown RBP10.95□□□□□ -0.66
CSTF3-201ENST00000323959 ZNF644Q9H582 1327 aaPredicted RBP10.95□□□□□ -0.66
CSTF3-201ENST00000323959 GPR162Q16538 588 aa10.95□□□□□ -0.66
CSTF3-201ENST00000323959 KANK1Q14678 1352 aa10.95□□□□□ -0.66
CSTF3-201ENST00000323959 GPBP1L1Q9HC44 474 aaPredicted RBP10.94□□□□□ -0.66
CSTF3-201ENST00000323959 A0A0G2JS52 829 aa10.94□□□□□ -0.66
CSTF3-201ENST00000323959 MYT1Q01538 1121 aa10.94□□□□□ -0.66
CSTF3-201ENST00000323959 RRBP1Q9P2E9 1410 aaKnown RBP10.93□□□□□ -0.66
CSTF3-201ENST00000323959 KLRG1Q96E93 195 aa10.93□□□□□ -0.66
CSTF3-201ENST00000323959 ABCA3Q99758 1704 aa10.93□□□□□ -0.66
CSTF3-201ENST00000323959 ERBINQ96RT1 1412 aa10.93□□□□□ -0.66
CSTF3-201ENST00000323959 TSPY4P0CV99 314 aa10.93□□□□□ -0.66
CSTF3-201ENST00000323959 TSPY10P0CW01 314 aa10.93□□□□□ -0.66
CSTF3-201ENST00000323959 ADCY9O60503 1353 aa10.92□□□□□ -0.66
CSTF3-201ENST00000323959 KIAA1210Q9ULL0 1709 aa10.92□□□□□ -0.66
CSTF3-201ENST00000323959 TRIM37O94972 964 aa10.92□□□□□ -0.66
CSTF3-201ENST00000323959 C11orf95C9JLR9 678 aaPredicted RBP10.91□□□□□ -0.66
CSTF3-201ENST00000323959 GRIN3BO60391 1043 aa10.91□□□□□ -0.66
CSTF3-201ENST00000323959 FAM98CQ17RN3 349 aaKnown RBP10.91□□□□□ -0.66
CSTF3-201ENST00000323959 SGIP1Q9BQI5 828 aa10.9□□□□□ -0.66
CSTF3-201ENST00000323959 COL14A1Q05707 1796 aaKnown RBP10.89□□□□□ -0.67
CSTF3-201ENST00000323959 NRXN3Q9Y4C0 1643 aa10.89□□□□□ -0.67
CSTF3-201ENST00000323959 MTFR1LQ9H019 292 aa10.89□□□□□ -0.67
CSTF3-201ENST00000323959 CEP162Q5TB80 1403 aa10.89□□□□□ -0.67
CSTF3-201ENST00000323959 PRAG1Q86YV5 1406 aa10.89□□□□□ -0.67
CSTF3-201ENST00000323959 KIF1AQ12756 1690 aa10.88□□□□□ -0.67
CSTF3-201ENST00000323959 ORAI2Q96SN7 254 aa10.88□□□□□ -0.67
CSTF3-201ENST00000323959 CEP350Q5VT06 3117 aa10.87□□□□□ -0.67
CSTF3-201ENST00000323959 CDC42BPGQ6DT37 1551 aa10.87□□□□□ -0.67
CSTF3-201ENST00000323959 ARXQ96QS3 562 aa10.87□□□□□ -0.67
CSTF3-201ENST00000323959 IQGAP3Q86VI3 1631 aa10.87□□□□□ -0.67
CSTF3-201ENST00000323959 SPATA31A5Q5VU36 1347 aa10.86□□□□□ -0.67
CSTF3-201ENST00000323959 SPATA31A3Q5VYP0 1347 aa10.86□□□□□ -0.67
CSTF3-201ENST00000323959 SPATA31A7Q8IWB4 1347 aa10.86□□□□□ -0.67
CSTF3-201ENST00000323959 ZBTB7AO95365 584 aa10.86□□□□□ -0.67
CSTF3-201ENST00000323959 COL24A1Q17RW2 1714 aa10.86□□□□□ -0.67
CSTF3-201ENST00000323959 CCDC144AA2RUR9 1427 aa10.85□□□□□ -0.67
CSTF3-201ENST00000323959 ATF5Q9Y2D1 282 aaPredicted RBP10.83□□□□□ -0.68
CSTF3-201ENST00000323959 ARHGEF28Q8N1W1 1705 aaKnown RBP10.83□□□□□ -0.68
CSTF3-201ENST00000323959 KIF3CO14782 793 aa10.82□□□□□ -0.68
CSTF3-201ENST00000323959 PLSCR1O15162 318 aa10.82□□□□□ -0.68
CSTF3-201ENST00000323959 FAM161AQ3B820 660 aa10.82□□□□□ -0.68
CSTF3-201ENST00000323959 FAM182BQ5T319 152 aa10.82□□□□□ -0.68
CSTF3-201ENST00000323959 TNS3Q68CZ2 1445 aa10.81□□□□□ -0.68
CSTF3-201ENST00000323959 ANO8Q9HCE9 1232 aaPredicted RBP10.81□□□□□ -0.68
CSTF3-201ENST00000323959 HAP1P54257 671 aaPredicted RBP10.81□□□□□ -0.68
CSTF3-201ENST00000323959 TULP4Q9NRJ4 1543 aa10.8□□□□□ -0.68
CSTF3-201ENST00000323959 STK32BQ9NY57 414 aa10.8□□□□□ -0.68
CSTF3-201ENST00000323959 TOMM70O94826 608 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms