RNA–Protein interactions for RNA: ENST00000322349.12

EEA1-201, Transcript of early endosome antigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EEA1, Length 9,875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-201ENST00000322349 ZKSCAN2Q63HK3 967 aa12.35□□□□□ -0.43
EEA1-201ENST00000322349 VPS37CA5D8V6 355 aaPredicted RBP12.35□□□□□ -0.43
EEA1-201ENST00000322349 FAM161AQ3B820 660 aa12.35□□□□□ -0.43
EEA1-201ENST00000322349 TTLL12Q14166 644 aaPredicted RBP12.35□□□□□ -0.43
EEA1-201ENST00000322349 TMEM132EQ6IEE7 984 aa12.35□□□□□ -0.43
EEA1-201ENST00000322349 UACAQ9BZF9 1416 aa12.34□□□□□ -0.43
EEA1-201ENST00000322349 GGNBP2Q9H3C7 697 aa12.34□□□□□ -0.43
EEA1-201ENST00000322349 GPRASP1Q5JY77 1395 aa12.34□□□□□ -0.43
EEA1-201ENST00000322349 RSPH4AQ5TD94 716 aa12.34□□□□□ -0.43
EEA1-201ENST00000322349 FMN1Q68DA7 1419 aa12.34□□□□□ -0.43
EEA1-201ENST00000322349 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
EEA1-201ENST00000322349 BRMS1Q9HCU9 246 aa12.34□□□□□ -0.43
EEA1-201ENST00000322349 HOOK1Q9UJC3 728 aaKnown RBP12.34□□□□□ -0.43
EEA1-201ENST00000322349 CABP4P57796 275 aa12.33□□□□□ -0.43
EEA1-201ENST00000322349 SPINK5Q9NQ38 1064 aaPredicted RBP12.33□□□□□ -0.43
EEA1-201ENST00000322349 TTLL5Q6EMB2 1281 aa12.33□□□□□ -0.44
EEA1-201ENST00000322349 MATR3P43243 847 aaKnown RBP eCLIP12.33□□□□□ -0.444e-10■■■■□ 19.9
EEA1-201ENST00000322349 TTC39AQ5SRH9 613 aa12.33□□□□□ -0.44
EEA1-201ENST00000322349 RNF20Q5VTR2 975 aa12.33□□□□□ -0.44
EEA1-201ENST00000322349 KRT18P05783 430 aaKnown RBP12.33□□□□□ -0.44
EEA1-201ENST00000322349 CDK5RAP3Q96JB5 506 aa12.33□□□□□ -0.44
EEA1-201ENST00000322349 ZHX3Q9H4I2 956 aa12.33□□□□□ -0.44
EEA1-201ENST00000322349 TBC1D2BQ9UPU7 963 aa12.32□□□□□ -0.44
EEA1-201ENST00000322349 APAF1O14727 1248 aa12.32□□□□□ -0.44
EEA1-201ENST00000322349 OFD1O75665 1012 aa12.32□□□□□ -0.44
EEA1-201ENST00000322349 MYL6BP14649 208 aa12.32□□□□□ -0.44
EEA1-201ENST00000322349 NLRP13Q86W25 1043 aa12.32□□□□□ -0.44
EEA1-201ENST00000322349 BAZ1AQ9NRL2 1556 aaPredicted RBP12.32□□□□□ -0.44
EEA1-201ENST00000322349 CCER2I3L3R5 266 aa12.31□□□□□ -0.44
EEA1-201ENST00000322349 CCDC97Q96F63 343 aaPredicted RBP12.31□□□□□ -0.44
EEA1-201ENST00000322349 ADAMTS2O95450 1211 aa12.31□□□□□ -0.44
EEA1-201ENST00000322349 DDX49Q9Y6V7 483 aaKnown RBP12.31□□□□□ -0.44
EEA1-201ENST00000322349 PRDM2Q13029 1718 aa12.31□□□□□ -0.44
EEA1-201ENST00000322349 TATP17735 454 aaPredicted RBP12.3□□□□□ -0.44
EEA1-201ENST00000322349 HOMER1Q86YM7 354 aa12.3□□□□□ -0.44
EEA1-201ENST00000322349 ATP6V1DQ9Y5K8 247 aa12.29□□□□□ -0.44
EEA1-201ENST00000322349 SLC3A2P08195 630 aaKnown RBP12.29□□□□□ -0.44
EEA1-201ENST00000322349 PDILTQ8N807 584 aa12.29□□□□□ -0.44
EEA1-201ENST00000322349 UBTFL1P0CB47 393 aaPredicted RBP12.29□□□□□ -0.44
EEA1-201ENST00000322349 CRBNQ96SW2 442 aa12.29□□□□□ -0.44
EEA1-201ENST00000322349 XBP1P17861 261 aa12.29□□□□□ -0.44
EEA1-201ENST00000322349 WDR78Q5VTH9 848 aa12.29□□□□□ -0.44
EEA1-201ENST00000322349 TMEM87AQ8NBN3 555 aa12.29□□□□□ -0.44
EEA1-201ENST00000322349 PIBF1Q8WXW3 757 aa12.29□□□□□ -0.44
EEA1-201ENST00000322349 FSD1Q9BTV5 496 aa12.28□□□□□ -0.44
EEA1-201ENST00000322349 SETQ01105 290 aaPredicted RBP12.28□□□□□ -0.44
EEA1-201ENST00000322349 PLCD3Q8N3E9 789 aa12.28□□□□□ -0.44
EEA1-201ENST00000322349 SMC3Q9UQE7 1217 aa12.28□□□□□ -0.44
EEA1-201ENST00000322349 KIF15Q9NS87 1388 aa12.28□□□□□ -0.44
EEA1-201ENST00000322349 SIL1Q9H173 461 aa12.28□□□□□ -0.44
EEA1-201ENST00000322349 ERC2O15083 957 aa12.28□□□□□ -0.44
EEA1-201ENST00000322349 CCDC85AQ96PX6 553 aaPredicted RBP12.27□□□□□ -0.44
EEA1-201ENST00000322349 PLEKHO1Q53GL0 409 aaPredicted RBP12.27□□□□□ -0.45
EEA1-201ENST00000322349 RBM19Q9Y4C8 960 aaKnown RBP12.27□□□□□ -0.45
EEA1-201ENST00000322349 SYCP1Q15431 976 aa12.27□□□□□ -0.45
EEA1-201ENST00000322349 BRPF1P55201 1214 aaPredicted RBP12.26□□□□□ -0.45
EEA1-201ENST00000322349 DHX57Q6P158 1386 aaKnown RBP12.26□□□□□ -0.45
EEA1-201ENST00000322349 GNL3LQ9NVN8 582 aaKnown RBP12.26□□□□□ -0.45
EEA1-201ENST00000322349 E9PSI1 815 aa12.26□□□□□ -0.45
EEA1-201ENST00000322349 PDCL3Q9H2J4 239 aa12.26□□□□□ -0.45
EEA1-201ENST00000322349 MYBBP1AQ9BQG0 1328 aaKnown RBP12.26□□□□□ -0.45
EEA1-201ENST00000322349 SART3Q15020 963 aaKnown RBP12.26□□□□□ -0.45
EEA1-201ENST00000322349 ECM2O94769 699 aaPredicted RBP12.26□□□□□ -0.45
EEA1-201ENST00000322349 SASS6Q6UVJ0 657 aa12.25□□□□□ -0.45
EEA1-201ENST00000322349 API5Q9BZZ5 524 aaKnown RBP12.25□□□□□ -0.45
EEA1-201ENST00000322349 CA8P35219 290 aa12.25□□□□□ -0.45
EEA1-201ENST00000322349 MPHOSPH8Q99549 860 aa12.25□□□□□ -0.45
EEA1-201ENST00000322349 SMG6Q86US8 1419 aaKnown RBP12.24□□□□□ -0.45
EEA1-201ENST00000322349 MAP4K4O95819 1239 aaPredicted RBP12.24□□□□□ -0.45
EEA1-201ENST00000322349 CCDC88BA6NC98 1476 aa12.24□□□□□ -0.45
EEA1-201ENST00000322349 REC8O95072 547 aa12.24□□□□□ -0.45
EEA1-201ENST00000322349 SCLT1Q96NL6 688 aa12.24□□□□□ -0.45
EEA1-201ENST00000322349 LNPKQ9C0E8 428 aa12.24□□□□□ -0.45
EEA1-201ENST00000322349 PRDM11Q9NQV5 511 aa12.24□□□□□ -0.45
EEA1-201ENST00000322349 CCDC158Q5M9N0 1113 aa12.23□□□□□ -0.45
EEA1-201ENST00000322349 USP5P45974 858 aa12.23□□□□□ -0.45
EEA1-201ENST00000322349 OLFM4Q6UX06 510 aa12.23□□□□□ -0.45
EEA1-201ENST00000322349 RUFY1Q96T51 708 aa12.23□□□□□ -0.45
EEA1-201ENST00000322349 NEBLO76041 1014 aa12.23□□□□□ -0.45
EEA1-201ENST00000322349 ZC3H6P61129 1189 aaKnown RBP12.23□□□□□ -0.45
EEA1-201ENST00000322349 NUP133Q8WUM0 1156 aa12.23□□□□□ -0.45
EEA1-201ENST00000322349 TIMELESSQ9UNS1 1208 aa12.23□□□□□ -0.45
EEA1-201ENST00000322349 CEBPZQ03701 1054 aaKnown RBP12.23□□□□□ -0.45
EEA1-201ENST00000322349 HSP90AB4PQ58FF6 505 aa12.23□□□□□ -0.45
EEA1-201ENST00000322349 DZIP1LQ8IYY4 767 aaKnown RBP12.23□□□□□ -0.45
EEA1-201ENST00000322349 WWC3Q9ULE0 1092 aa12.23□□□□□ -0.45
EEA1-201ENST00000322349 CAGE1Q8TC20 777 aa12.22□□□□□ -0.45
EEA1-201ENST00000322349 ZNF76P36508 570 aa12.22□□□□□ -0.45
EEA1-201ENST00000322349 SLC26A8Q96RN1 970 aa12.22□□□□□ -0.45
EEA1-201ENST00000322349 SURF6O75683 361 aaKnown RBP12.22□□□□□ -0.45
EEA1-201ENST00000322349 DDX19BQ9UMR2 479 aa12.22□□□□□ -0.45
EEA1-201ENST00000322349 ROCK1Q13464 1354 aa12.22□□□□□ -0.45
EEA1-201ENST00000322349 EXOC6Q8TAG9 804 aa12.22□□□□□ -0.45
EEA1-201ENST00000322349 ANKRD62A6NC57 917 aa12.21□□□□□ -0.45
EEA1-201ENST00000322349 MTHFSP49914 203 aa12.21□□□□□ -0.45
EEA1-201ENST00000322349 GNAI1P63096 354 aa12.21□□□□□ -0.45
EEA1-201ENST00000322349 CCDC73Q6ZRK6 1079 aa12.21□□□□□ -0.45
EEA1-201ENST00000322349 WDHD1O75717 1129 aaPredicted RBP12.21□□□□□ -0.45
EEA1-201ENST00000322349 DDX11L8A8MPP1 907 aa12.21□□□□□ -0.45
EEA1-201ENST00000322349 GPS2Q13227 327 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms