RNA–Protein interactions for RNA: ENST00000321517.3

LINC00476-201, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 1,269 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-201ENST00000321517 STK26Q9P289 416 aa24.38■■□□□ 1.49
LINC00476-201ENST00000321517 LAMC1P11047 1609 aa24.37■■□□□ 1.49
LINC00476-201ENST00000321517 RXRBP28702 533 aa24.37■■□□□ 1.49
LINC00476-201ENST00000321517 C8orf37Q96NL8 207 aa24.35■■□□□ 1.49
LINC00476-201ENST00000321517 IFT172Q9UG01 1749 aa24.35■■□□□ 1.49
LINC00476-201ENST00000321517 ANKRD30BQ9BXX2 1392 aa24.33■■□□□ 1.49
LINC00476-201ENST00000321517 PLEKHH1Q9ULM0 1364 aa24.33■■□□□ 1.49
LINC00476-201ENST00000321517 ADAMTS2O95450 1211 aa24.33■■□□□ 1.49
LINC00476-201ENST00000321517 UPF1Q92900 1129 aaKnown RBP eCLIP24.33■■□□□ 1.49
LINC00476-201ENST00000321517 LRPPRCP42704 1394 aaKnown RBP24.31■■□□□ 1.48
LINC00476-201ENST00000321517 QTRT2Q9H974 415 aaKnown RBP24.31■■□□□ 1.48
LINC00476-201ENST00000321517 TECPR2O15040 1411 aa24.3■■□□□ 1.48
LINC00476-201ENST00000321517 NUTM2FA1L443 756 aa24.3■■□□□ 1.48
LINC00476-201ENST00000321517 ESCO1Q5FWF5 840 aa24.3■■□□□ 1.48
LINC00476-201ENST00000321517 ABCC11Q96J66 1382 aa24.29■■□□□ 1.48
LINC00476-201ENST00000321517 PIK3C2GO75747 1445 aa24.29■■□□□ 1.48
LINC00476-201ENST00000321517 CDC42BPGQ6DT37 1551 aa24.28■■□□□ 1.48
LINC00476-201ENST00000321517 XPCQ01831 940 aaPredicted RBP24.27■■□□□ 1.48
LINC00476-201ENST00000321517 NGLY1Q96IV0 654 aa24.27■■□□□ 1.48
LINC00476-201ENST00000321517 FOXO3O43524 673 aa24.26■■□□□ 1.47
LINC00476-201ENST00000321517 C14orf93Q9H972 538 aaKnown RBP24.26■■□□□ 1.47
LINC00476-201ENST00000321517 CDK12Q9NYV4 1490 aaPredicted RBP24.26■■□□□ 1.47
LINC00476-201ENST00000321517 YTHDC2Q9H6S0 1430 aaKnown RBP24.25■■□□□ 1.47
LINC00476-201ENST00000321517 CFAP70Q5T0N1 1121 aa24.24■■□□□ 1.47
LINC00476-201ENST00000321517 PXDNQ92626 1479 aa24.24■■□□□ 1.47
LINC00476-201ENST00000321517 RBM6P78332 1123 aaKnown RBP24.23■■□□□ 1.47
LINC00476-201ENST00000321517 RGS12O14924 1447 aa24.22■■□□□ 1.47
LINC00476-201ENST00000321517 NPHP3Q7Z494 1330 aa24.22■■□□□ 1.47
LINC00476-201ENST00000321517 KNDC1Q76NI1 1749 aa24.21■■□□□ 1.47
LINC00476-201ENST00000321517 NRXN1Q9ULB1 1477 aa24.21■■□□□ 1.47
LINC00476-201ENST00000321517 COL22A1Q8NFW1 1626 aaPredicted RBP24.2■■□□□ 1.46
LINC00476-201ENST00000321517 FNBP4Q8N3X1 1017 aaPredicted RBP24.19■■□□□ 1.46
LINC00476-201ENST00000321517 SIRT1Q96EB6 747 aa24.19■■□□□ 1.46
LINC00476-201ENST00000321517 USP21Q9UK80 565 aa24.19■■□□□ 1.46
LINC00476-201ENST00000321517 MYOM2P54296 1465 aa24.19■■□□□ 1.46
LINC00476-201ENST00000321517 FMN2Q9NZ56 1722 aa24.16■■□□□ 1.46
LINC00476-201ENST00000321517 SAFB2Q14151 953 aaKnown RBP eCLIP24.14■■□□□ 1.45
LINC00476-201ENST00000321517 RGPD8O14715 1765 aaPredicted RBP24.14■■□□□ 1.45
LINC00476-201ENST00000321517 PRAM1Q96QH2 718 aa24.13■■□□□ 1.45
LINC00476-201ENST00000321517 DHX57Q6P158 1386 aaKnown RBP24.13■■□□□ 1.45
LINC00476-201ENST00000321517 TRPC5Q9UL62 973 aaPredicted RBP24.12■■□□□ 1.45
LINC00476-201ENST00000321517 BCL9LQ86UU0 1499 aa24.12■■□□□ 1.45
LINC00476-201ENST00000321517 SPATA31A3Q5VYP0 1347 aa24.11■■□□□ 1.45
LINC00476-201ENST00000321517 ATRNO75882 1429 aa24.11■■□□□ 1.45
LINC00476-201ENST00000321517 KRT28Q7Z3Y7 464 aa24.11■■□□□ 1.45
LINC00476-201ENST00000321517 PHF8Q9UPP1 1060 aa24.08■■□□□ 1.45
LINC00476-201ENST00000321517 KDM2AQ9Y2K7 1162 aa24.08■■□□□ 1.45
LINC00476-201ENST00000321517 MARF1Q9Y4F3 1742 aaKnown RBP24.07■■□□□ 1.44
LINC00476-201ENST00000321517 ADGRB1O14514 1584 aa24.06■■□□□ 1.44
LINC00476-201ENST00000321517 KIF1AQ12756 1690 aa24.05■■□□□ 1.44
LINC00476-201ENST00000321517 CABLES1Q8TDN4 633 aa24.04■■□□□ 1.44
LINC00476-201ENST00000321517 DCAF11Q8TEB1 546 aa24.04■■□□□ 1.44
LINC00476-201ENST00000321517 POGKQ9P215 609 aa24.04■■□□□ 1.44
LINC00476-201ENST00000321517 TRAK1Q9UPV9 953 aa24.04■■□□□ 1.44
LINC00476-201ENST00000321517 CLSPNQ9HAW4 1339 aa24.04■■□□□ 1.44
LINC00476-201ENST00000321517 DLC1Q96QB1 1528 aa24.03■■□□□ 1.44
LINC00476-201ENST00000321517 PMFBP1Q8TBY8 1022 aa24.02■■□□□ 1.44
LINC00476-201ENST00000321517 HIRIP3Q9BW71 556 aaPredicted RBP24.02■■□□□ 1.44
LINC00476-201ENST00000321517 USP32Q8NFA0 1604 aa24.02■■□□□ 1.44
LINC00476-201ENST00000321517 PLEKHG5O94827 1062 aa24.01■■□□□ 1.43
LINC00476-201ENST00000321517 GJD4Q96KN9 370 aaPredicted RBP24.01■■□□□ 1.43
LINC00476-201ENST00000321517 SLIT2O94813 1529 aa24■■□□□ 1.43
LINC00476-201ENST00000321517 PSME1Q06323 249 aa23.98■■□□□ 1.43
LINC00476-201ENST00000321517 UNC5CLQ8IV45 518 aa23.98■■□□□ 1.43
LINC00476-201ENST00000321517 MINK1Q8N4C8 1332 aaPredicted RBP23.98■■□□□ 1.43
LINC00476-201ENST00000321517 PRR36Q9H6K5 1346 aa23.98■■□□□ 1.43
LINC00476-201ENST00000321517 TNS3Q68CZ2 1445 aa23.98■■□□□ 1.43
LINC00476-201ENST00000321517 ATAD2Q6PL18 1390 aa23.97■■□□□ 1.43
LINC00476-201ENST00000321517 SBNO1A3KN83 1393 aa23.96■■□□□ 1.43
LINC00476-201ENST00000321517 LMOD2Q6P5Q4 547 aa23.95■■□□□ 1.42
LINC00476-201ENST00000321517 ADGRB2O60241 1585 aa23.95■■□□□ 1.42
LINC00476-201ENST00000321517 GLI3P10071 1580 aa23.95■■□□□ 1.42
LINC00476-201ENST00000321517 ANKARQ7Z5J8 1434 aa23.94■■□□□ 1.42
LINC00476-201ENST00000321517 EP400Q96L91 3159 aa23.94■■□□□ 1.42
LINC00476-201ENST00000321517 RALGAPBQ86X10 1494 aa23.94■■□□□ 1.42
LINC00476-201ENST00000321517 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.93■■□□□ 1.42
LINC00476-201ENST00000321517 FAM83GA6ND36 823 aa23.91■■□□□ 1.42
LINC00476-201ENST00000321517 WASLO00401 505 aaPredicted RBP23.91■■□□□ 1.42
LINC00476-201ENST00000321517 HAP1P54257 671 aaPredicted RBP23.9■■□□□ 1.42
LINC00476-201ENST00000321517 CCER1Q8TC90 406 aaPredicted RBP23.89■■□□□ 1.41
LINC00476-201ENST00000321517 STAC3Q96MF2 364 aa23.89■■□□□ 1.41
LINC00476-201ENST00000321517 ABCA3Q99758 1704 aa23.89■■□□□ 1.41
LINC00476-201ENST00000321517 TRPM3Q9HCF6 1732 aaPredicted RBP23.89■■□□□ 1.41
LINC00476-201ENST00000321517 ARHGEF10O15013 1369 aa23.88■■□□□ 1.41
LINC00476-201ENST00000321517 VPS72Q15906 364 aa23.87■■□□□ 1.41
LINC00476-201ENST00000321517 TULP4Q9NRJ4 1543 aa23.86■■□□□ 1.41
LINC00476-201ENST00000321517 BRWD3Q6RI45 1802 aa23.85■■□□□ 1.41
LINC00476-201ENST00000321517 PLCH1Q4KWH8 1693 aa23.85■■□□□ 1.41
LINC00476-201ENST00000321517 SEPT12Q8IYM1 358 aa23.84■■□□□ 1.41
LINC00476-201ENST00000321517 ARHGEF28Q8N1W1 1705 aaKnown RBP23.84■■□□□ 1.41
LINC00476-201ENST00000321517 ALS2Q96Q42 1657 aa23.83■■□□□ 1.41
LINC00476-201ENST00000321517 ONECUT3O60422 494 aaPredicted RBP23.83■■□□□ 1.41
LINC00476-201ENST00000321517 GPRASP1Q5JY77 1395 aa23.82■■□□□ 1.4
LINC00476-201ENST00000321517 NBPF1Q3BBV0 1214 aa23.82■■□□□ 1.4
LINC00476-201ENST00000321517 NUDT16Q96DE0 195 aaKnown RBP23.82■■□□□ 1.4
LINC00476-201ENST00000321517 SRCAPQ6ZRS2 3230 aa23.81■■□□□ 1.4
LINC00476-201ENST00000321517 NGDNQ8NEJ9 315 aaKnown RBP23.81■■□□□ 1.4
LINC00476-201ENST00000321517 NWD2Q9ULI1 1742 aa23.81■■□□□ 1.4
LINC00476-201ENST00000321517 CCDC125Q86Z20 511 aa23.8■■□□□ 1.4
LINC00476-201ENST00000321517 CDK19Q9BWU1 502 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms