RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ZMYM4Q5VZL5 1548 aa15.82■□□□□ 0.12
DNMT3A-202ENST00000321117 NSD3Q9BZ95 1437 aa15.82■□□□□ 0.12
DNMT3A-202ENST00000321117 CABP2Q9NPB3 220 aa15.82■□□□□ 0.12
DNMT3A-202ENST00000321117 MINK1Q8N4C8 1332 aaPredicted RBP15.82■□□□□ 0.12
DNMT3A-202ENST00000321117 ST18O60284 1047 aa15.82■□□□□ 0.12
DNMT3A-202ENST00000321117 CT47B1P0C2W7 299 aaPredicted RBP15.82■□□□□ 0.12
DNMT3A-202ENST00000321117 ASXL1Q8IXJ9 1541 aa15.81■□□□□ 0.12
DNMT3A-202ENST00000321117 PLCB2Q00722 1185 aa15.81■□□□□ 0.12
DNMT3A-202ENST00000321117 LMOD3Q0VAK6 560 aa15.81■□□□□ 0.12
DNMT3A-202ENST00000321117 ATF7IPQ6VMQ6 1270 aa15.81■□□□□ 0.12
DNMT3A-202ENST00000321117 MBD5Q9P267 1494 aa15.81■□□□□ 0.12
DNMT3A-202ENST00000321117 TBC1D32Q96NH3 1257 aa15.8■□□□□ 0.12
DNMT3A-202ENST00000321117 NOB1Q9ULX3 412 aaKnown RBP15.8■□□□□ 0.12
DNMT3A-202ENST00000321117 PBRM1Q86U86 1689 aa15.8■□□□□ 0.12
DNMT3A-202ENST00000321117 SPINK5Q9NQ38 1064 aaPredicted RBP15.79■□□□□ 0.12
DNMT3A-202ENST00000321117 ADGBQ8N7X0 1667 aa15.79■□□□□ 0.12
DNMT3A-202ENST00000321117 A2MP01023 1474 aa15.79■□□□□ 0.12
DNMT3A-202ENST00000321117 BCORL1Q5H9F3 1711 aa15.79■□□□□ 0.12
DNMT3A-202ENST00000321117 GPRASP1Q5JY77 1395 aa15.78■□□□□ 0.12
DNMT3A-202ENST00000321117 VSIG10Q8N0Z9 540 aa15.78■□□□□ 0.12
DNMT3A-202ENST00000321117 GRPEL1Q9HAV7 217 aa15.78■□□□□ 0.12
DNMT3A-202ENST00000321117 PCDHB15Q9Y5E8 787 aa15.78■□□□□ 0.12
DNMT3A-202ENST00000321117 PIK3C2GO75747 1445 aa15.78■□□□□ 0.12
DNMT3A-202ENST00000321117 EIF2AK4Q9P2K8 1649 aaKnown RBP15.77■□□□□ 0.12
DNMT3A-202ENST00000321117 HMMRO75330 724 aa15.77■□□□□ 0.12
DNMT3A-202ENST00000321117 ISY1Q9ULR0 285 aaKnown RBP15.77■□□□□ 0.12
DNMT3A-202ENST00000321117 SOX12O15370 315 aa15.77■□□□□ 0.11
DNMT3A-202ENST00000321117 API5Q9BZZ5 524 aaKnown RBP15.77■□□□□ 0.11
DNMT3A-202ENST00000321117 SEC24BO95487 1268 aa15.76■□□□□ 0.11
DNMT3A-202ENST00000321117 ADGRF5Q8IZF2 1346 aa15.76■□□□□ 0.11
DNMT3A-202ENST00000321117 FOXD4L5Q5VV16 416 aaPredicted RBP15.75■□□□□ 0.11
DNMT3A-202ENST00000321117 FOXD4L4Q8WXT5 416 aaPredicted RBP15.75■□□□□ 0.11
DNMT3A-202ENST00000321117 SYAP1Q96A49 352 aaPredicted RBP15.75■□□□□ 0.11
DNMT3A-202ENST00000321117 SYCP2Q9BX26 1530 aa15.75■□□□□ 0.11
DNMT3A-202ENST00000321117 CDC45O75419 566 aa15.74■□□□□ 0.11
DNMT3A-202ENST00000321117 NUCB2P80303 420 aa15.74■□□□□ 0.11
DNMT3A-202ENST00000321117 RTF1Q92541 710 aaKnown RBP15.74■□□□□ 0.11
DNMT3A-202ENST00000321117 NASPP49321 788 aaPredicted RBP15.74■□□□□ 0.11
DNMT3A-202ENST00000321117 GNAI1P63096 354 aa15.74■□□□□ 0.11
DNMT3A-202ENST00000321117 SLC4A10Q6U841 1118 aa15.74■□□□□ 0.11
DNMT3A-202ENST00000321117 TMEM57Q8N5G2 664 aa15.74■□□□□ 0.11
DNMT3A-202ENST00000321117 SSH1Q8WYL5 1049 aa15.74■□□□□ 0.11
DNMT3A-202ENST00000321117 TARBP1Q13395 1621 aaKnown RBP15.73■□□□□ 0.11
DNMT3A-202ENST00000321117 HMOX1P09601 288 aa15.73■□□□□ 0.11
DNMT3A-202ENST00000321117 CIZ1Q9ULV3 898 aaPredicted RBP15.73■□□□□ 0.11
DNMT3A-202ENST00000321117 TMPOP42166 694 aaKnown RBP15.73■□□□□ 0.11
DNMT3A-202ENST00000321117 CHD1LQ86WJ1 897 aa15.73■□□□□ 0.11
DNMT3A-202ENST00000321117 MCTP1Q6DN14 999 aa15.73■□□□□ 0.11
DNMT3A-202ENST00000321117 NOL8Q76FK4 1167 aaKnown RBP15.73■□□□□ 0.11
DNMT3A-202ENST00000321117 GCC1Q96CN9 775 aa15.73■□□□□ 0.11
DNMT3A-202ENST00000321117 ZBTB7CA1YPR0 619 aa15.72■□□□□ 0.11
DNMT3A-202ENST00000321117 ESPNB1AK53 854 aa15.72■□□□□ 0.11
DNMT3A-202ENST00000321117 C1orf115Q9H7X2 142 aa15.72■□□□□ 0.11
DNMT3A-202ENST00000321117 REC8O95072 547 aa15.72■□□□□ 0.11
DNMT3A-202ENST00000321117 TRIM6-TRIM34B2RNG4 842 aa15.71■□□□□ 0.11
DNMT3A-202ENST00000321117 KIAA2012Q0VF49 1180 aa15.71■□□□□ 0.11
DNMT3A-202ENST00000321117 PRKAR2BP31323 418 aa15.71■□□□□ 0.11
DNMT3A-202ENST00000321117 LRRIQ1Q96JM4 1722 aa15.71■□□□□ 0.11
DNMT3A-202ENST00000321117 ARID3AQ99856 593 aa15.71■□□□□ 0.11
DNMT3A-202ENST00000321117 INTS3Q68E01 1043 aaKnown RBP15.71■□□□□ 0.1
DNMT3A-202ENST00000321117 PLPPR3Q6T4P5 718 aa15.71■□□□□ 0.1
DNMT3A-202ENST00000321117 RLBP1P12271 317 aa15.7■□□□□ 0.1
DNMT3A-202ENST00000321117 TRIM27P14373 513 aa15.7■□□□□ 0.1
DNMT3A-202ENST00000321117 TNNQ9UQP3 1299 aa15.7■□□□□ 0.1
DNMT3A-202ENST00000321117 DUOX2Q9NRD8 1548 aa15.7■□□□□ 0.1
DNMT3A-202ENST00000321117 K7ELQ4 463 aaPredicted RBP15.7■□□□□ 0.1
DNMT3A-202ENST00000321117 OS9Q13438 667 aaPredicted RBP15.7■□□□□ 0.1
DNMT3A-202ENST00000321117 STK31Q9BXU1 1019 aa15.69■□□□□ 0.1
DNMT3A-202ENST00000321117 POLR3AO14802 1390 aaPredicted RBP15.69■□□□□ 0.1
DNMT3A-202ENST00000321117 C14orf37Q86TY3 774 aa15.69■□□□□ 0.1
DNMT3A-202ENST00000321117 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
DNMT3A-202ENST00000321117 CARD14Q9BXL6 1004 aa15.68■□□□□ 0.1
DNMT3A-202ENST00000321117 NPC1L1Q9UHC9 1359 aa15.68■□□□□ 0.1
DNMT3A-202ENST00000321117 XRCC6P12956 609 aaKnown RBP eCLIP15.68■□□□□ 0.1
DNMT3A-202ENST00000321117 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.68■□□□□ 0.1
DNMT3A-202ENST00000321117 KCNJ4P48050 445 aa15.67■□□□□ 0.1
DNMT3A-202ENST00000321117 RABEP1Q15276 862 aa15.67■□□□□ 0.1
DNMT3A-202ENST00000321117 KIAA1211Q6ZU35 1233 aa15.67■□□□□ 0.1
DNMT3A-202ENST00000321117 COG3Q96JB2 828 aa15.67■□□□□ 0.1
DNMT3A-202ENST00000321117 CCDC173Q0VFZ6 552 aa15.67■□□□□ 0.1
DNMT3A-202ENST00000321117 CHAF1AQ13111 956 aaPredicted RBP15.67■□□□□ 0.1
DNMT3A-202ENST00000321117 CAVIN1Q6NZI2 390 aaKnown RBP15.67■□□□□ 0.1
DNMT3A-202ENST00000321117 MLECQ14165 292 aa15.66■□□□□ 0.1
DNMT3A-202ENST00000321117 PHF14O94880 888 aa15.65■□□□□ 0.1
DNMT3A-202ENST00000321117 FOXD4L6Q3SYB3 417 aaPredicted RBP15.65■□□□□ 0.1
DNMT3A-202ENST00000321117 FOXD4L3Q6VB84 417 aaPredicted RBP15.65■□□□□ 0.1
DNMT3A-202ENST00000321117 ZNF521Q96K83 1311 aa15.65■□□□□ 0.1
DNMT3A-202ENST00000321117 TWISTNBQ3B726 338 aaPredicted RBP15.65■□□□□ 0.1
DNMT3A-202ENST00000321117 TNPO1Q92973 898 aaKnown RBP15.65■□□□□ 0.1
DNMT3A-202ENST00000321117 PANK2Q9BZ23 570 aa15.65■□□□□ 0.1
DNMT3A-202ENST00000321117 RILPL2Q969X0 211 aa15.64■□□□□ 0.09
DNMT3A-202ENST00000321117 ZNF428Q96B54 188 aa15.64■□□□□ 0.09
DNMT3A-202ENST00000321117 GOLGA6L4A6NEF3 574 aa15.64■□□□□ 0.09
DNMT3A-202ENST00000321117 HDAC1Q13547 482 aaPredicted RBP15.64■□□□□ 0.09
DNMT3A-202ENST00000321117 ABCC11Q96J66 1382 aa15.64■□□□□ 0.09
DNMT3A-202ENST00000321117 MAGI2Q86UL8 1455 aa15.64■□□□□ 0.09
DNMT3A-202ENST00000321117 RPGRIP1LQ68CZ1 1315 aa15.64■□□□□ 0.09
DNMT3A-202ENST00000321117 CCDC27Q2M243 656 aa15.63■□□□□ 0.09
DNMT3A-202ENST00000321117 TPM2P07951 284 aa15.63■□□□□ 0.09
DNMT3A-202ENST00000321117 CEP170Q5SW79 1584 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms