RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 ZFYVE27Q5T4F4 411 aa10.76□□□□□ -0.69
SSBP2-201ENST00000320672 SMC3Q9UQE7 1217 aa10.76□□□□□ -0.69
SSBP2-201ENST00000320672 KIF15Q9NS87 1388 aa10.76□□□□□ -0.69
SSBP2-201ENST00000320672 NEXNQ0ZGT2 675 aa10.76□□□□□ -0.69
SSBP2-201ENST00000320672 AEBP2Q6ZN18 517 aaPredicted RBP10.76□□□□□ -0.69
SSBP2-201ENST00000320672 E9PSI1 815 aa10.76□□□□□ -0.69
SSBP2-201ENST00000320672 THUMPD2Q9BTF0 503 aaKnown RBP10.76□□□□□ -0.69
SSBP2-201ENST00000320672 NFKBIBQ15653 356 aa10.76□□□□□ -0.69
SSBP2-201ENST00000320672 IFT57Q9NWB7 429 aa10.76□□□□□ -0.69
SSBP2-201ENST00000320672 CWC22Q9HCG8 908 aaKnown RBP10.75□□□□□ -0.69
SSBP2-201ENST00000320672 FMN1Q68DA7 1419 aa10.75□□□□□ -0.69
SSBP2-201ENST00000320672 SURF6O75683 361 aaKnown RBP10.75□□□□□ -0.69
SSBP2-201ENST00000320672 FAM177A1Q8N128 213 aaPredicted RBP10.75□□□□□ -0.69
SSBP2-201ENST00000320672 AFAP1Q8N556 730 aa10.75□□□□□ -0.69
SSBP2-201ENST00000320672 PRPF40AO75400 957 aaKnown RBP10.75□□□□□ -0.69
SSBP2-201ENST00000320672 LMOD3Q0VAK6 560 aa10.75□□□□□ -0.69
SSBP2-201ENST00000320672 CAVIN1Q6NZI2 390 aaKnown RBP10.74□□□□□ -0.69
SSBP2-201ENST00000320672 C22orf23Q9BZE7 217 aa10.74□□□□□ -0.69
SSBP2-201ENST00000320672 KIF7Q2M1P5 1343 aa10.74□□□□□ -0.69
SSBP2-201ENST00000320672 CGNL1Q0VF96 1302 aa10.74□□□□□ -0.69
SSBP2-201ENST00000320672 SLC4A8Q2Y0W8 1093 aa10.74□□□□□ -0.69
SSBP2-201ENST00000320672 RRS1Q15050 365 aaKnown RBP10.74□□□□□ -0.69
SSBP2-201ENST00000320672 ZNF219Q9P2Y4 722 aaPredicted RBP10.74□□□□□ -0.69
SSBP2-201ENST00000320672 PDZRN3Q9UPQ7 1066 aa10.74□□□□□ -0.69
SSBP2-201ENST00000320672 EVC2Q86UK5 1308 aa10.74□□□□□ -0.69
SSBP2-201ENST00000320672 ECM2O94769 699 aaPredicted RBP10.74□□□□□ -0.69
SSBP2-201ENST00000320672 SLC12A5Q9H2X9 1139 aa10.74□□□□□ -0.69
SSBP2-201ENST00000320672 FSD1Q9BTV5 496 aa10.73□□□□□ -0.69
SSBP2-201ENST00000320672 IL1RAPL2Q9NP60 686 aa10.73□□□□□ -0.69
SSBP2-201ENST00000320672 TRMT1LQ7Z2T5 733 aaKnown RBP10.73□□□□□ -0.69
SSBP2-201ENST00000320672 DCTN1Q14203 1278 aa10.73□□□□□ -0.69
SSBP2-201ENST00000320672 NOB1Q9ULX3 412 aaKnown RBP10.73□□□□□ -0.69
SSBP2-201ENST00000320672 CHMP4BP1P59074 171 aa10.73□□□□□ -0.69
SSBP2-201ENST00000320672 NOL10Q9BSC4 688 aaKnown RBP10.73□□□□□ -0.69
SSBP2-201ENST00000320672 TMX1Q9H3N1 280 aa10.73□□□□□ -0.69
SSBP2-201ENST00000320672 PRKAR2BP31323 418 aa10.73□□□□□ -0.69
SSBP2-201ENST00000320672 CCDC144AA2RUR9 1427 aa10.73□□□□□ -0.69
SSBP2-201ENST00000320672 TSR1Q2NL82 804 aaKnown RBP10.72□□□□□ -0.69
SSBP2-201ENST00000320672 CARMIL2Q6F5E8 1435 aa10.72□□□□□ -0.69
SSBP2-201ENST00000320672 PDS5BQ9NTI5 1447 aa10.72□□□□□ -0.69
SSBP2-201ENST00000320672 FIBPO43427 364 aa10.72□□□□□ -0.69
SSBP2-201ENST00000320672 USHBP1Q8N6Y0 703 aa10.72□□□□□ -0.69
SSBP2-201ENST00000320672 EIF3AQ14152 1382 aaKnown RBP10.72□□□□□ -0.69
SSBP2-201ENST00000320672 DDX11L8A8MPP1 907 aa10.72□□□□□ -0.69
SSBP2-201ENST00000320672 SLC26A8Q96RN1 970 aa10.72□□□□□ -0.69
SSBP2-201ENST00000320672 WIZO95785 1651 aa10.72□□□□□ -0.69
SSBP2-201ENST00000320672 CSPP1Q1MSJ5 1256 aa10.72□□□□□ -0.69
SSBP2-201ENST00000320672 RAPGEF4Q8WZA2 1011 aa10.72□□□□□ -0.69
SSBP2-201ENST00000320672 ABTB2Q8N961 1025 aa10.72□□□□□ -0.69
SSBP2-201ENST00000320672 TCP11L2Q8N4U5 519 aa10.72□□□□□ -0.69
SSBP2-201ENST00000320672 JARID2Q92833 1246 aaPredicted RBP10.72□□□□□ -0.69
SSBP2-201ENST00000320672 ZHX3Q9H4I2 956 aa10.71□□□□□ -0.69
SSBP2-201ENST00000320672 SMARCA5O60264 1052 aaPredicted RBP10.71□□□□□ -0.69
SSBP2-201ENST00000320672 ZKSCAN1P17029 563 aaPredicted RBP10.71□□□□□ -0.69
SSBP2-201ENST00000320672 NEK4P51957 841 aa10.71□□□□□ -0.7
SSBP2-201ENST00000320672 TRDNQ13061 729 aa10.71□□□□□ -0.7
SSBP2-201ENST00000320672 UBTFL1P0CB47 393 aaPredicted RBP10.7□□□□□ -0.7
SSBP2-201ENST00000320672 SASS6Q6UVJ0 657 aa10.7□□□□□ -0.7
SSBP2-201ENST00000320672 VGFO15240 615 aaPredicted RBP10.7□□□□□ -0.7
SSBP2-201ENST00000320672 ZC3H6P61129 1189 aaKnown RBP10.7□□□□□ -0.7
SSBP2-201ENST00000320672 RUNDC1Q96C34 613 aa10.7□□□□□ -0.7
SSBP2-201ENST00000320672 DDX19BQ9UMR2 479 aa10.69□□□□□ -0.7
SSBP2-201ENST00000320672 FBLN1P23142 703 aa10.69□□□□□ -0.7
SSBP2-201ENST00000320672 PRAM1Q96QH2 718 aa10.69□□□□□ -0.7
SSBP2-201ENST00000320672 NACADO15069 1562 aa10.69□□□□□ -0.7
SSBP2-201ENST00000320672 SMC2O95347 1197 aa10.69□□□□□ -0.7
SSBP2-201ENST00000320672 SULT6B1Q6IMI4 303 aa10.69□□□□□ -0.7
SSBP2-201ENST00000320672 PDE3BQ13370 1112 aa10.68□□□□□ -0.7
SSBP2-201ENST00000320672 NUTM1Q86Y26 1132 aa10.68□□□□□ -0.7
SSBP2-201ENST00000320672 CFAP44Q96MT7 982 aa10.68□□□□□ -0.7
SSBP2-201ENST00000320672 ERICH2A1L162 156 aa10.68□□□□□ -0.7
SSBP2-201ENST00000320672 SLC4A2P04920 1241 aa10.68□□□□□ -0.7
SSBP2-201ENST00000320672 NUP133Q8WUM0 1156 aa10.68□□□□□ -0.7
SSBP2-201ENST00000320672 WASHC2AQ641Q2 1341 aa10.68□□□□□ -0.7
SSBP2-201ENST00000320672 TMEM132AQ24JP5 1023 aa10.68□□□□□ -0.7
SSBP2-201ENST00000320672 CCDC43Q96MW1 224 aaKnown RBP10.68□□□□□ -0.7
SSBP2-201ENST00000320672 CHMP5Q9NZZ3 219 aa10.68□□□□□ -0.7
SSBP2-201ENST00000320672 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.68□□□□□ -0.74e-6■■■■■ 98.6
SSBP2-201ENST00000320672 ATF3P18847 181 aa10.67□□□□□ -0.7
SSBP2-201ENST00000320672 RAB11FIP4Q86YS3 637 aa10.67□□□□□ -0.7
SSBP2-201ENST00000320672 AKNAQ7Z591 1439 aa10.67□□□□□ -0.7
SSBP2-201ENST00000320672 PHF14O94880 888 aa10.67□□□□□ -0.7
SSBP2-201ENST00000320672 CCDC82Q8N4S0 544 aa10.67□□□□□ -0.7
SSBP2-201ENST00000320672 CABP1Q9NZU7 370 aa10.67□□□□□ -0.7
SSBP2-201ENST00000320672 PLCD4Q9BRC7 762 aa10.67□□□□□ -0.7
SSBP2-201ENST00000320672 SDF4Q9BRK5 362 aa10.67□□□□□ -0.7
SSBP2-201ENST00000320672 AMOTL1Q8IY63 956 aa10.66□□□□□ -0.7
SSBP2-201ENST00000320672 CCDC34Q96HJ3 373 aa10.66□□□□□ -0.7
SSBP2-201ENST00000320672 RBM5P52756 815 aaKnown RBP eCLIP10.66□□□□□ -0.7
SSBP2-201ENST00000320672 FKBP4Q02790 459 aaKnown RBP eCLIP10.66□□□□□ -0.7
SSBP2-201ENST00000320672 NBPF8Q3BBV2 869 aa10.66□□□□□ -0.7
SSBP2-201ENST00000320672 RALYLQ86SE5 291 aaKnown RBP10.66□□□□□ -0.7
SSBP2-201ENST00000320672 RUFY2Q8WXA3 655 aa10.66□□□□□ -0.7
SSBP2-201ENST00000320672 DDX11Q96FC9 970 aa10.66□□□□□ -0.7
SSBP2-201ENST00000320672 INTS3Q68E01 1043 aaKnown RBP10.66□□□□□ -0.7
SSBP2-201ENST00000320672 TPM2P07951 284 aa10.66□□□□□ -0.7
SSBP2-201ENST00000320672 GUCY1B3Q02153 619 aa10.66□□□□□ -0.7
SSBP2-201ENST00000320672 CNNM1Q9NRU3 951 aa10.66□□□□□ -0.7
SSBP2-201ENST00000320672 API5Q9BZZ5 524 aaKnown RBP10.65□□□□□ -0.7
SSBP2-201ENST00000320672 DDX58O95786 925 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms