RNA–Protein interactions for RNA: ENST00000320161.10

SGIP1-202, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 680 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-202ENST00000320161 HFM1A2PYH4 1435 aa12.55□□□□□ -0.4
SGIP1-202ENST00000320161 RRBP1Q9P2E9 1410 aaKnown RBP12.55□□□□□ -0.4
SGIP1-202ENST00000320161 DDX17Q92841 729 aaKnown RBP12.55□□□□□ -0.4
SGIP1-202ENST00000320161 LAMC1P11047 1609 aa12.55□□□□□ -0.4
SGIP1-202ENST00000320161 USP21Q9UK80 565 aa12.53□□□□□ -0.4
SGIP1-202ENST00000320161 MARF1Q9Y4F3 1742 aaKnown RBP12.53□□□□□ -0.4
SGIP1-202ENST00000320161 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.41
SGIP1-202ENST00000320161 TRPC5Q9UL62 973 aaPredicted RBP12.52□□□□□ -0.41
SGIP1-202ENST00000320161 NPHP3Q7Z494 1330 aa12.52□□□□□ -0.41
SGIP1-202ENST00000320161 ATAD2Q6PL18 1390 aa12.52□□□□□ -0.41
SGIP1-202ENST00000320161 ESCO1Q5FWF5 840 aa12.51□□□□□ -0.41
SGIP1-202ENST00000320161 ORAI2Q96SN7 254 aa12.51□□□□□ -0.41
SGIP1-202ENST00000320161 LRPPRCP42704 1394 aaKnown RBP12.51□□□□□ -0.41
SGIP1-202ENST00000320161 ROBO2Q9HCK4 1378 aa12.51□□□□□ -0.41
SGIP1-202ENST00000320161 RGS12O14924 1447 aa12.51□□□□□ -0.41
SGIP1-202ENST00000320161 CDC42BPGQ6DT37 1551 aa12.51□□□□□ -0.41
SGIP1-202ENST00000320161 SOS2Q07890 1332 aaPredicted RBP12.5□□□□□ -0.41
SGIP1-202ENST00000320161 CCDC144AA2RUR9 1427 aa12.5□□□□□ -0.41
SGIP1-202ENST00000320161 COL22A1Q8NFW1 1626 aaPredicted RBP12.5□□□□□ -0.41
SGIP1-202ENST00000320161 PRAG1Q86YV5 1406 aa12.49□□□□□ -0.41
SGIP1-202ENST00000320161 CNKSR2Q8WXI2 1034 aa12.48□□□□□ -0.41
SGIP1-202ENST00000320161 ANKRD30BQ9BXX2 1392 aa12.47□□□□□ -0.41
SGIP1-202ENST00000320161 RGL3Q3MIN7 710 aa12.47□□□□□ -0.41
SGIP1-202ENST00000320161 STK26Q9P289 416 aa12.47□□□□□ -0.41
SGIP1-202ENST00000320161 KNDC1Q76NI1 1749 aa12.47□□□□□ -0.41
SGIP1-202ENST00000320161 IFT172Q9UG01 1749 aa12.47□□□□□ -0.41
SGIP1-202ENST00000320161 KIF1AQ12756 1690 aa12.47□□□□□ -0.41
SGIP1-202ENST00000320161 ACIN1Q9UKV3 1341 aaKnown RBP12.46□□□□□ -0.41
SGIP1-202ENST00000320161 HAP1P54257 671 aaPredicted RBP12.46□□□□□ -0.41
SGIP1-202ENST00000320161 FOXO3O43524 673 aa12.45□□□□□ -0.42
SGIP1-202ENST00000320161 FNBP4Q8N3X1 1017 aaPredicted RBP12.45□□□□□ -0.42
SGIP1-202ENST00000320161 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.44□□□□□ -0.42
SGIP1-202ENST00000320161 FMN2Q9NZ56 1722 aa12.44□□□□□ -0.42
SGIP1-202ENST00000320161 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
SGIP1-202ENST00000320161 XPCQ01831 940 aaPredicted RBP12.43□□□□□ -0.42
SGIP1-202ENST00000320161 ZRANB1Q9UGI0 708 aa12.43□□□□□ -0.42
SGIP1-202ENST00000320161 ATRNO75882 1429 aa12.43□□□□□ -0.42
SGIP1-202ENST00000320161 RGPD8O14715 1765 aaPredicted RBP12.43□□□□□ -0.42
SGIP1-202ENST00000320161 ADGRF5Q8IZF2 1346 aa12.42□□□□□ -0.42
SGIP1-202ENST00000320161 MYOM2P54296 1465 aa12.42□□□□□ -0.42
SGIP1-202ENST00000320161 PXDNQ92626 1479 aa12.42□□□□□ -0.42
SGIP1-202ENST00000320161 CCDC125Q86Z20 511 aa12.42□□□□□ -0.42
SGIP1-202ENST00000320161 TECPR2O15040 1411 aa12.42□□□□□ -0.42
SGIP1-202ENST00000320161 PSME1Q06323 249 aa12.41□□□□□ -0.42
SGIP1-202ENST00000320161 WAPLQ7Z5K2 1190 aa12.41□□□□□ -0.42
SGIP1-202ENST00000320161 MPHOSPH9Q99550 1183 aa12.41□□□□□ -0.42
SGIP1-202ENST00000320161 ABCC11Q96J66 1382 aa12.41□□□□□ -0.42
SGIP1-202ENST00000320161 TMEM132EQ6IEE7 984 aa12.4□□□□□ -0.42
SGIP1-202ENST00000320161 GJD4Q96KN9 370 aaPredicted RBP12.4□□□□□ -0.42
SGIP1-202ENST00000320161 SPATA31E1Q6ZUB1 1445 aa12.39□□□□□ -0.43
SGIP1-202ENST00000320161 YTHDC2Q9H6S0 1430 aaKnown RBP12.39□□□□□ -0.43
SGIP1-202ENST00000320161 SF3B2Q13435 895 aaKnown RBP12.39□□□□□ -0.43
SGIP1-202ENST00000320161 RNF216Q9NWF9 866 aaPredicted RBP12.39□□□□□ -0.43
SGIP1-202ENST00000320161 DHX57Q6P158 1386 aaKnown RBP12.39□□□□□ -0.43
SGIP1-202ENST00000320161 PIK3C2GO75747 1445 aa12.38□□□□□ -0.43
SGIP1-202ENST00000320161 USP32Q8NFA0 1604 aa12.38□□□□□ -0.43
SGIP1-202ENST00000320161 LMOD2Q6P5Q4 547 aa12.38□□□□□ -0.43
SGIP1-202ENST00000320161 KRT28Q7Z3Y7 464 aa12.38□□□□□ -0.43
SGIP1-202ENST00000320161 CCDC9Q9Y3X0 531 aaKnown RBP12.38□□□□□ -0.43
SGIP1-202ENST00000320161 SPATA31A3Q5VYP0 1347 aa12.37□□□□□ -0.43
SGIP1-202ENST00000320161 NWD2Q9ULI1 1742 aa12.37□□□□□ -0.43
SGIP1-202ENST00000320161 UNC5CLQ8IV45 518 aa12.37□□□□□ -0.43
SGIP1-202ENST00000320161 BCL9LQ86UU0 1499 aa12.37□□□□□ -0.43
SGIP1-202ENST00000320161 BRWD3Q6RI45 1802 aa12.37□□□□□ -0.43
SGIP1-202ENST00000320161 PLCH1Q4KWH8 1693 aa12.36□□□□□ -0.43
SGIP1-202ENST00000320161 PLEKHG5O94827 1062 aa12.36□□□□□ -0.43
SGIP1-202ENST00000320161 SIRT1Q96EB6 747 aa12.36□□□□□ -0.43
SGIP1-202ENST00000320161 POGKQ9P215 609 aa12.36□□□□□ -0.43
SGIP1-202ENST00000320161 PHF8Q9UPP1 1060 aa12.36□□□□□ -0.43
SGIP1-202ENST00000320161 ARHGEF10O15013 1369 aa12.35□□□□□ -0.43
SGIP1-202ENST00000320161 A0A0G2JS52 829 aa12.35□□□□□ -0.43
SGIP1-202ENST00000320161 MYT1Q01538 1121 aa12.35□□□□□ -0.43
SGIP1-202ENST00000320161 TNS3Q68CZ2 1445 aa12.35□□□□□ -0.43
SGIP1-202ENST00000320161 PLEKHH1Q9ULM0 1364 aa12.34□□□□□ -0.43
SGIP1-202ENST00000320161 C14orf93Q9H972 538 aaKnown RBP12.34□□□□□ -0.43
SGIP1-202ENST00000320161 RALGAPBQ86X10 1494 aa12.34□□□□□ -0.43
SGIP1-202ENST00000320161 EIF3AQ14152 1382 aaKnown RBP12.33□□□□□ -0.44
SGIP1-202ENST00000320161 SAFB2Q14151 953 aaKnown RBP eCLIP12.33□□□□□ -0.44
SGIP1-202ENST00000320161 BLMP54132 1417 aaPredicted RBP12.33□□□□□ -0.44
SGIP1-202ENST00000320161 ABCA3Q99758 1704 aa12.33□□□□□ -0.44
SGIP1-202ENST00000320161 EP400Q96L91 3159 aa12.32□□□□□ -0.44
SGIP1-202ENST00000320161 SLIT2O94813 1529 aa12.32□□□□□ -0.44
SGIP1-202ENST00000320161 SBNO1A3KN83 1393 aa12.32□□□□□ -0.44
SGIP1-202ENST00000320161 GLI3P10071 1580 aa12.32□□□□□ -0.44
SGIP1-202ENST00000320161 PRAM1Q96QH2 718 aa12.32□□□□□ -0.44
SGIP1-202ENST00000320161 GPRASP1Q5JY77 1395 aa12.31□□□□□ -0.44
SGIP1-202ENST00000320161 CFAP70Q5T0N1 1121 aa12.31□□□□□ -0.44
SGIP1-202ENST00000320161 NRXN1Q9ULB1 1477 aa12.31□□□□□ -0.44
SGIP1-202ENST00000320161 VPS72Q15906 364 aa12.3□□□□□ -0.44
SGIP1-202ENST00000320161 SEPT12Q8IYM1 358 aa12.3□□□□□ -0.44
SGIP1-202ENST00000320161 ITSN1Q15811 1721 aa12.3□□□□□ -0.44
SGIP1-202ENST00000320161 DLC1Q96QB1 1528 aa12.3□□□□□ -0.44
SGIP1-202ENST00000320161 ANKARQ7Z5J8 1434 aa12.29□□□□□ -0.44
SGIP1-202ENST00000320161 PMFBP1Q8TBY8 1022 aa12.29□□□□□ -0.44
SGIP1-202ENST00000320161 CABLES1Q8TDN4 633 aa12.29□□□□□ -0.44
SGIP1-202ENST00000320161 COL14A1Q05707 1796 aaKnown RBP12.28□□□□□ -0.44
SGIP1-202ENST00000320161 ADGRB2O60241 1585 aa12.28□□□□□ -0.44
SGIP1-202ENST00000320161 KRT27Q7Z3Y8 459 aa12.28□□□□□ -0.44
SGIP1-202ENST00000320161 PAK3O75914 559 aaPredicted RBP12.26□□□□□ -0.45
SGIP1-202ENST00000320161 BAG6P46379 1132 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms