RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 KDM5AP29375 1690 aaKnown RBP20.22■□□□□ 0.83
SHROOM1-201ENST00000319854 MTHFSP49914 203 aa20.21■□□□□ 0.83
SHROOM1-201ENST00000319854 PIK3C2GO75747 1445 aa20.2■□□□□ 0.82
SHROOM1-201ENST00000319854 POGKQ9P215 609 aa20.2■□□□□ 0.82
SHROOM1-201ENST00000319854 BCAR3O75815 825 aa20.2■□□□□ 0.82
SHROOM1-201ENST00000319854 MYOM1P52179 1685 aa20.2■□□□□ 0.82
SHROOM1-201ENST00000319854 ADGRB3O60242 1522 aa20.2■□□□□ 0.82
SHROOM1-201ENST00000319854 SLC24A1O60721 1099 aa20.2■□□□□ 0.82
SHROOM1-201ENST00000319854 ZMYM4Q5VZL5 1548 aa20.18■□□□□ 0.82
SHROOM1-201ENST00000319854 PLPPR3Q6T4P5 718 aa20.18■□□□□ 0.82
SHROOM1-201ENST00000319854 PRAM1Q96QH2 718 aa20.18■□□□□ 0.82
SHROOM1-201ENST00000319854 GGNBP2Q9H3C7 697 aa20.18■□□□□ 0.82
SHROOM1-201ENST00000319854 EVC2Q86UK5 1308 aa20.17■□□□□ 0.82
SHROOM1-201ENST00000319854 SLFN5Q08AF3 891 aa20.17■□□□□ 0.82
SHROOM1-201ENST00000319854 LMTK2Q8IWU2 1503 aa20.17■□□□□ 0.82
SHROOM1-201ENST00000319854 RPGRIP1LQ68CZ1 1315 aa20.16■□□□□ 0.82
SHROOM1-201ENST00000319854 CGNL1Q0VF96 1302 aa20.14■□□□□ 0.81
SHROOM1-201ENST00000319854 NEO1Q92859 1461 aa20.14■□□□□ 0.81
SHROOM1-201ENST00000319854 DDRGK1Q96HY6 314 aa20.14■□□□□ 0.81
SHROOM1-201ENST00000319854 U2AF1L5P0DN76 240 aaPredicted RBP20.14■□□□□ 0.81
SHROOM1-201ENST00000319854 U2AF1Q01081 240 aaKnown RBP eCLIP20.14■□□□□ 0.81
SHROOM1-201ENST00000319854 BCL2L13Q9BXK5 485 aa20.14■□□□□ 0.81
SHROOM1-201ENST00000319854 NRXN1Q9ULB1 1477 aa20.13■□□□□ 0.81
SHROOM1-201ENST00000319854 ZNF521Q96K83 1311 aa20.13■□□□□ 0.81
SHROOM1-201ENST00000319854 CFAP74Q9C0B2 1584 aa20.13■□□□□ 0.81
SHROOM1-201ENST00000319854 U2SURPO15042 1029 aaKnown RBP20.13■□□□□ 0.81
SHROOM1-201ENST00000319854 CANXP27824 592 aaKnown RBP20.13■□□□□ 0.81
SHROOM1-201ENST00000319854 SIGLEC1Q9BZZ2 1709 aa20.13■□□□□ 0.81
SHROOM1-201ENST00000319854 DIP2CQ9Y2E4 1556 aa20.12■□□□□ 0.81
SHROOM1-201ENST00000319854 TSPOAP1O95153 1857 aa20.12■□□□□ 0.81
SHROOM1-201ENST00000319854 SLC52A1Q9NWF4 448 aa20.12■□□□□ 0.81
SHROOM1-201ENST00000319854 KIAA1210Q9ULL0 1709 aa20.12■□□□□ 0.81
SHROOM1-201ENST00000319854 NPC1L1Q9UHC9 1359 aa20.12■□□□□ 0.81
SHROOM1-201ENST00000319854 FBLN1P23142 703 aa20.11■□□□□ 0.81
SHROOM1-201ENST00000319854 TCP11L2Q8N4U5 519 aa20.11■□□□□ 0.81
SHROOM1-201ENST00000319854 IFT172Q9UG01 1749 aa20.1■□□□□ 0.81
SHROOM1-201ENST00000319854 WAPLQ7Z5K2 1190 aa20.1■□□□□ 0.81
SHROOM1-201ENST00000319854 WWC1Q8IX03 1113 aa20.1■□□□□ 0.81
SHROOM1-201ENST00000319854 CAMSAP1Q5T5Y3 1602 aa20.1■□□□□ 0.81
SHROOM1-201ENST00000319854 ADGRB1O14514 1584 aa20.09■□□□□ 0.81
SHROOM1-201ENST00000319854 FRAT2O75474 233 aaPredicted RBP20.09■□□□□ 0.81
SHROOM1-201ENST00000319854 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.09■□□□□ 0.81
SHROOM1-201ENST00000319854 RGS3P49796 1198 aa20.08■□□□□ 0.81
SHROOM1-201ENST00000319854 SBNO2Q9Y2G9 1366 aa20.08■□□□□ 0.81
SHROOM1-201ENST00000319854 PPLO60437 1756 aa20.08■□□□□ 0.8
SHROOM1-201ENST00000319854 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.07■□□□□ 0.8
SHROOM1-201ENST00000319854 CFAP53Q96M91 514 aa20.07■□□□□ 0.8
SHROOM1-201ENST00000319854 E9PSI1 815 aa20.07■□□□□ 0.8
SHROOM1-201ENST00000319854 QRICH2Q9H0J4 1663 aa20.07■□□□□ 0.8
SHROOM1-201ENST00000319854 PANK1Q8TE04 598 aa20.06■□□□□ 0.8
SHROOM1-201ENST00000319854 INSRP06213 1382 aa20.05■□□□□ 0.8
SHROOM1-201ENST00000319854 ESF1Q9H501 851 aaKnown RBP20.05■□□□□ 0.8
SHROOM1-201ENST00000319854 CABP1Q9NZU7 370 aa20.05■□□□□ 0.8
SHROOM1-201ENST00000319854 RUNDC1Q96C34 613 aa20.04■□□□□ 0.8
SHROOM1-201ENST00000319854 GLI2P10070 1586 aa20.04■□□□□ 0.8
SHROOM1-201ENST00000319854 CLUAP1Q96AJ1 413 aa20.04■□□□□ 0.8
SHROOM1-201ENST00000319854 NEURL4Q96JN8 1562 aa20.04■□□□□ 0.8
SHROOM1-201ENST00000319854 COG6Q9Y2V7 657 aa20.03■□□□□ 0.8
SHROOM1-201ENST00000319854 CDK19Q9BWU1 502 aa20.03■□□□□ 0.8
SHROOM1-201ENST00000319854 NEXMIFQ5QGS0 1516 aa20.03■□□□□ 0.8
SHROOM1-201ENST00000319854 A0A1W2PP64 1363 aa20.03■□□□□ 0.8
SHROOM1-201ENST00000319854 DAXXQ9UER7 740 aaPredicted RBP20.02■□□□□ 0.8
SHROOM1-201ENST00000319854 POLR3AO14802 1390 aaPredicted RBP20.02■□□□□ 0.8
SHROOM1-201ENST00000319854 SETBP1Q9Y6X0 1596 aa20.02■□□□□ 0.79
SHROOM1-201ENST00000319854 TNNQ9UQP3 1299 aa20.01■□□□□ 0.79
SHROOM1-201ENST00000319854 TULP4Q9NRJ4 1543 aa20.01■□□□□ 0.79
SHROOM1-201ENST00000319854 RICTORQ6R327 1708 aa20.01■□□□□ 0.79
SHROOM1-201ENST00000319854 C8orf34Q49A92 452 aa20■□□□□ 0.79
SHROOM1-201ENST00000319854 KDM2BQ8NHM5 1336 aa20■□□□□ 0.79
SHROOM1-201ENST00000319854 NKTRP30414 1462 aaKnown RBP20■□□□□ 0.79
SHROOM1-201ENST00000319854 ANKRD36BQ8N2N9 1353 aa20■□□□□ 0.79
SHROOM1-201ENST00000319854 TRMT2AQ8IZ69 625 aaKnown RBP19.99■□□□□ 0.79
SHROOM1-201ENST00000319854 NUTM2FA1L443 756 aa19.99■□□□□ 0.79
SHROOM1-201ENST00000319854 TSR2Q969E8 191 aaKnown RBP19.99■□□□□ 0.79
SHROOM1-201ENST00000319854 MYO5BQ9ULV0 1848 aa19.99■□□□□ 0.79
SHROOM1-201ENST00000319854 PIK3C2BO00750 1634 aa19.99■□□□□ 0.79
SHROOM1-201ENST00000319854 FYB1O15117 783 aa19.98■□□□□ 0.79
SHROOM1-201ENST00000319854 TERF2IPQ9NYB0 399 aa19.98■□□□□ 0.79
SHROOM1-201ENST00000319854 NCKAP5LQ9HCH0 1330 aa19.98■□□□□ 0.79
SHROOM1-201ENST00000319854 TXNDC2Q86VQ3 553 aa19.97■□□□□ 0.79
SHROOM1-201ENST00000319854 YTHDC2Q9H6S0 1430 aaKnown RBP19.96■□□□□ 0.79
SHROOM1-201ENST00000319854 FAM43AQ8N2R8 423 aa19.95■□□□□ 0.78
SHROOM1-201ENST00000319854 MYO3AQ8NEV4 1616 aa19.95■□□□□ 0.78
SHROOM1-201ENST00000319854 ARHGAP31Q2M1Z3 1444 aa19.95■□□□□ 0.78
SHROOM1-201ENST00000319854 HDGFL2Q7Z4V5 671 aaPredicted RBP19.95■□□□□ 0.78
SHROOM1-201ENST00000319854 FAM161AQ3B820 660 aa19.95■□□□□ 0.78
SHROOM1-201ENST00000319854 RSPH6AQ9H0K4 717 aa19.93■□□□□ 0.78
SHROOM1-201ENST00000319854 CENPQQ7L2Z9 268 aaPredicted RBP19.93■□□□□ 0.78
SHROOM1-201ENST00000319854 RIMBP3CA6NJZ7 1639 aa19.93■□□□□ 0.78
SHROOM1-201ENST00000319854 RIMBP3BA6NNM3 1639 aa19.93■□□□□ 0.78
SHROOM1-201ENST00000319854 RIMBP3Q9UFD9 1639 aa19.93■□□□□ 0.78
SHROOM1-201ENST00000319854 IGHDP01880 384 aa19.92■□□□□ 0.78
SHROOM1-201ENST00000319854 MAPK8IP3Q9UPT6 1336 aa19.92■□□□□ 0.78
SHROOM1-201ENST00000319854 ZRANB1Q9UGI0 708 aa19.91■□□□□ 0.78
SHROOM1-201ENST00000319854 ARHGEF28Q8N1W1 1705 aaKnown RBP19.91■□□□□ 0.78
SHROOM1-201ENST00000319854 RLBP1P12271 317 aa19.9■□□□□ 0.78
SHROOM1-201ENST00000319854 RARSP54136 660 aaKnown RBP19.9■□□□□ 0.78
SHROOM1-201ENST00000319854 HMOX1P09601 288 aa19.9■□□□□ 0.78
SHROOM1-201ENST00000319854 PREX1Q8TCU6 1659 aa19.89■□□□□ 0.78
SHROOM1-201ENST00000319854 ZC3H13Q5T200 1668 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms