RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 ADAMTS13Q76LX8 1427 aa12.6□□□□□ -0.39
CAPN3-201ENST00000318023 ATF3P18847 181 aa12.6□□□□□ -0.39
CAPN3-201ENST00000318023 IQGAP1P46940 1657 aa12.6□□□□□ -0.39
CAPN3-201ENST00000318023 XPCQ01831 940 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-201ENST00000318023 NBPF1Q3BBV0 1214 aa12.59□□□□□ -0.39
CAPN3-201ENST00000318023 NPM2Q86SE8 214 aaKnown RBP12.59□□□□□ -0.39
CAPN3-201ENST00000318023 POGKQ9P215 609 aa12.58□□□□□ -0.4
CAPN3-201ENST00000318023 LTBP4Q8N2S1 1624 aa12.58□□□□□ -0.4
CAPN3-201ENST00000318023 MED14O60244 1454 aa12.58□□□□□ -0.4
CAPN3-201ENST00000318023 PTPRUQ92729 1446 aa12.58□□□□□ -0.4
CAPN3-201ENST00000318023 POLR1AO95602 1720 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-201ENST00000318023 MINK1Q8N4C8 1332 aaPredicted RBP12.56□□□□□ -0.4
CAPN3-201ENST00000318023 SPATA31E1Q6ZUB1 1445 aa12.56□□□□□ -0.4
CAPN3-201ENST00000318023 PRAM1Q96QH2 718 aa12.56□□□□□ -0.4
CAPN3-201ENST00000318023 LRRC7Q96NW7 1537 aa12.56□□□□□ -0.4
CAPN3-201ENST00000318023 SLAIN2Q9P270 581 aa12.55□□□□□ -0.4
CAPN3-201ENST00000318023 MSH6P52701 1360 aa12.55□□□□□ -0.4
CAPN3-201ENST00000318023 RPGRIP1LQ68CZ1 1315 aa12.55□□□□□ -0.4
CAPN3-201ENST00000318023 GLIPR1L2Q4G1C9 344 aa12.55□□□□□ -0.4
CAPN3-201ENST00000318023 RSPH6AQ9H0K4 717 aa12.55□□□□□ -0.4
CAPN3-201ENST00000318023 ROBO2Q9HCK4 1378 aa12.55□□□□□ -0.4
CAPN3-201ENST00000318023 PLEKHH1Q9ULM0 1364 aa12.55□□□□□ -0.4
CAPN3-201ENST00000318023 NEXMIFQ5QGS0 1516 aa12.53□□□□□ -0.4
CAPN3-201ENST00000318023 ORAI2Q96SN7 254 aa12.53□□□□□ -0.4
CAPN3-201ENST00000318023 LMOD2Q6P5Q4 547 aa12.53□□□□□ -0.4
CAPN3-201ENST00000318023 C19orf44Q9H6X5 657 aa12.53□□□□□ -0.4
CAPN3-201ENST00000318023 TONSLQ96HA7 1378 aa12.52□□□□□ -0.4
CAPN3-201ENST00000318023 ESCO1Q5FWF5 840 aa12.52□□□□□ -0.41
CAPN3-201ENST00000318023 NUTM2BA6NNL0 878 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-201ENST00000318023 NUTM2EB1AL46 878 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-201ENST00000318023 NUTM2AQ8IVF1 878 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-201ENST00000318023 KIF1BO60333 1816 aa12.52□□□□□ -0.41
CAPN3-201ENST00000318023 STRCP1A6NGW2 1772 aa12.51□□□□□ -0.41
CAPN3-201ENST00000318023 C14orf93Q9H972 538 aaKnown RBP12.51□□□□□ -0.41
CAPN3-201ENST00000318023 FOXO3O43524 673 aa12.5□□□□□ -0.41
CAPN3-201ENST00000318023 PMFBP1Q8TBY8 1022 aa12.5□□□□□ -0.41
CAPN3-201ENST00000318023 NBPF8Q3BBV2 869 aa12.5□□□□□ -0.41
CAPN3-201ENST00000318023 CADPS2Q86UW7 1296 aa12.49□□□□□ -0.41
CAPN3-201ENST00000318023 DAXXQ9UER7 740 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-201ENST00000318023 GSE1Q14687 1217 aa12.48□□□□□ -0.41
CAPN3-201ENST00000318023 POLR3GLQ9BT43 218 aa12.48□□□□□ -0.41
CAPN3-201ENST00000318023 USP35Q9P2H5 1018 aa12.48□□□□□ -0.41
CAPN3-201ENST00000318023 A0A0U1RQG5 324 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-201ENST00000318023 CPS1P31327 1500 aa12.47□□□□□ -0.41
CAPN3-201ENST00000318023 ALKQ9UM73 1620 aa12.47□□□□□ -0.41
CAPN3-201ENST00000318023 BRINP3Q76B58 766 aa12.46□□□□□ -0.42
CAPN3-201ENST00000318023 FRAT1Q92837 279 aaPredicted RBP12.46□□□□□ -0.42
CAPN3-201ENST00000318023 DISP3Q9P2K9 1392 aa12.46□□□□□ -0.42
CAPN3-201ENST00000318023 YTHDC2Q9H6S0 1430 aaKnown RBP12.45□□□□□ -0.42
CAPN3-201ENST00000318023 CARD11Q9BXL7 1154 aa12.45□□□□□ -0.42
CAPN3-201ENST00000318023 PIK3C2GO75747 1445 aa12.45□□□□□ -0.42
CAPN3-201ENST00000318023 SRPK2P78362 688 aaKnown RBP12.44□□□□□ -0.42
CAPN3-201ENST00000318023 PHF23Q9BUL5 403 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-201ENST00000318023 ROCK2O75116 1388 aaKnown RBP12.43□□□□□ -0.42
CAPN3-201ENST00000318023 NRXN3Q9Y4C0 1643 aa12.43□□□□□ -0.42
CAPN3-201ENST00000318023 ADAMTS2O95450 1211 aa12.43□□□□□ -0.42
CAPN3-201ENST00000318023 NUTM2GQ5VZR2 741 aa12.43□□□□□ -0.42
CAPN3-201ENST00000318023 CABP2Q9NPB3 220 aa12.43□□□□□ -0.42
CAPN3-201ENST00000318023 LRPPRCP42704 1394 aaKnown RBP12.41□□□□□ -0.42
CAPN3-201ENST00000318023 PIK3R4Q99570 1358 aa12.41□□□□□ -0.42
CAPN3-201ENST00000318023 SETBP1Q9Y6X0 1596 aa12.4□□□□□ -0.42
CAPN3-201ENST00000318023 CNGB1Q14028 1251 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-201ENST00000318023 CABLES1Q8TDN4 633 aa12.4□□□□□ -0.42
CAPN3-201ENST00000318023 KDM5AP29375 1690 aaKnown RBP12.4□□□□□ -0.42
CAPN3-201ENST00000318023 PPM1GO15355 546 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-201ENST00000318023 SOX12O15370 315 aa12.4□□□□□ -0.42
CAPN3-201ENST00000318023 MEX3CQ5U5Q3 659 aaKnown RBP12.4□□□□□ -0.42
CAPN3-201ENST00000318023 FAM43AQ8N2R8 423 aa12.4□□□□□ -0.42
CAPN3-201ENST00000318023 NKTRP30414 1462 aaKnown RBP12.4□□□□□ -0.43
CAPN3-201ENST00000318023 NGDNQ8NEJ9 315 aaKnown RBP12.39□□□□□ -0.43
CAPN3-201ENST00000318023 PPLO60437 1756 aa12.39□□□□□ -0.43
CAPN3-201ENST00000318023 ZBTB7CA1YPR0 619 aa12.39□□□□□ -0.43
CAPN3-201ENST00000318023 HAP1P54257 671 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-201ENST00000318023 ASXL1Q8IXJ9 1541 aa12.39□□□□□ -0.43
CAPN3-201ENST00000318023 CDK19Q9BWU1 502 aa12.38□□□□□ -0.43
CAPN3-201ENST00000318023 ABCC11Q96J66 1382 aa12.38□□□□□ -0.43
CAPN3-201ENST00000318023 PSME1Q06323 249 aa12.38□□□□□ -0.43
CAPN3-201ENST00000318023 CCDC184Q52MB2 194 aa12.38□□□□□ -0.43
CAPN3-201ENST00000318023 TMC1Q8TDI8 760 aa12.38□□□□□ -0.43
CAPN3-201ENST00000318023 FAM9BQ8IZU0 186 aa12.38□□□□□ -0.43
CAPN3-201ENST00000318023 PRAG1Q86YV5 1406 aa12.37□□□□□ -0.43
CAPN3-201ENST00000318023 ADGRL3Q9HAR2 1447 aa12.37□□□□□ -0.43
CAPN3-201ENST00000318023 CHD2O14647 1828 aaKnown RBP12.37□□□□□ -0.43
CAPN3-201ENST00000318023 NFKBIBQ15653 356 aa12.36□□□□□ -0.43
CAPN3-201ENST00000318023 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
CAPN3-201ENST00000318023 HSP90AA2PQ14568 343 aaPredicted RBP12.36□□□□□ -0.43
CAPN3-201ENST00000318023 PHF8Q9UPP1 1060 aa12.36□□□□□ -0.43
CAPN3-201ENST00000318023 WASLO00401 505 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-201ENST00000318023 C8orf37Q96NL8 207 aa12.35□□□□□ -0.43
CAPN3-201ENST00000318023 SRCAPQ6ZRS2 3230 aa12.35□□□□□ -0.43
CAPN3-201ENST00000318023 ST20-MTHFSA0A0A6YYL1 179 aa12.35□□□□□ -0.43
CAPN3-201ENST00000318023 NUDT16Q96DE0 195 aaKnown RBP12.34□□□□□ -0.43
CAPN3-201ENST00000318023 PRR36Q9H6K5 1346 aa12.34□□□□□ -0.43
CAPN3-201ENST00000318023 MST1RQ04912 1400 aa12.34□□□□□ -0.43
CAPN3-201ENST00000318023 MYOM2P54296 1465 aa12.34□□□□□ -0.43
CAPN3-201ENST00000318023 C1orf167Q5SNV9 1468 aa12.34□□□□□ -0.43
CAPN3-201ENST00000318023 KRT28Q7Z3Y7 464 aa12.34□□□□□ -0.43
CAPN3-201ENST00000318023 XIRP1Q702N8 1843 aaKnown RBP12.34□□□□□ -0.43
CAPN3-201ENST00000318023 SENP3-EIF4A1A0A087X0R7 540 aa12.33□□□□□ -0.44
CAPN3-201ENST00000318023 SLC4A3P48751 1232 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms