RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 CRBNQ96SW2 442 aa27.21■■□□□ 1.95
TTC39C-202ENST00000317571 SLC52A1Q9NWF4 448 aa27.2■■□□□ 1.95
TTC39C-202ENST00000317571 SLFN5Q08AF3 891 aa27.19■■□□□ 1.94
TTC39C-202ENST00000317571 FBXO31Q5XUX0 539 aaPredicted RBP27.19■■□□□ 1.94
TTC39C-202ENST00000317571 TRMT2AQ8IZ69 625 aaKnown RBP27.18■■□□□ 1.94
TTC39C-202ENST00000317571 DMRT2Q9Y5R5 561 aa27.18■■□□□ 1.94
TTC39C-202ENST00000317571 TNNT2P45379 298 aaPredicted RBP27.17■■□□□ 1.94
TTC39C-202ENST00000317571 SAFB2Q14151 953 aaKnown RBP eCLIP27.16■■□□□ 1.94
TTC39C-202ENST00000317571 MORC1Q86VD1 984 aa27.16■■□□□ 1.94
TTC39C-202ENST00000317571 CABP2Q9NPB3 220 aa27.15■■□□□ 1.94
TTC39C-202ENST00000317571 EVC2Q86UK5 1308 aa27.14■■□□□ 1.94
TTC39C-202ENST00000317571 PTPRMP28827 1452 aa27.13■■□□□ 1.93
TTC39C-202ENST00000317571 STK26Q9P289 416 aa27.12■■□□□ 1.93
TTC39C-202ENST00000317571 ANKRD36BQ8N2N9 1353 aa27.12■■□□□ 1.93
TTC39C-202ENST00000317571 PUS7Q96PZ0 661 aaKnown RBP27.11■■□□□ 1.93
TTC39C-202ENST00000317571 REREQ9P2R6 1566 aa27.09■■□□□ 1.93
TTC39C-202ENST00000317571 CGNL1Q0VF96 1302 aa27.08■■□□□ 1.93
TTC39C-202ENST00000317571 CLTCQ00610 1675 aaKnown RBP27.07■■□□□ 1.92
TTC39C-202ENST00000317571 NKTRP30414 1462 aaKnown RBP27.06■■□□□ 1.92
TTC39C-202ENST00000317571 SKAP1Q86WV1 359 aa27.06■■□□□ 1.92
TTC39C-202ENST00000317571 AGLP35573 1532 aa27.06■■□□□ 1.92
TTC39C-202ENST00000317571 MTHFSP49914 203 aa27.05■■□□□ 1.92
TTC39C-202ENST00000317571 IQSEC2Q5JU85 1478 aa27.05■■□□□ 1.92
TTC39C-202ENST00000317571 YTHDC2Q9H6S0 1430 aaKnown RBP27.05■■□□□ 1.92
TTC39C-202ENST00000317571 ALKQ9UM73 1620 aa27.05■■□□□ 1.92
TTC39C-202ENST00000317571 A0A1W2PP64 1363 aa27.04■■□□□ 1.92
TTC39C-202ENST00000317571 ERICH6Q7L0X2 663 aa27.04■■□□□ 1.92
TTC39C-202ENST00000317571 WWC1Q8IX03 1113 aa27.02■■□□□ 1.92
TTC39C-202ENST00000317571 PRAM1Q96QH2 718 aa27.02■■□□□ 1.92
TTC39C-202ENST00000317571 E9PSI1 815 aa27.01■■□□□ 1.92
TTC39C-202ENST00000317571 MINK1Q8N4C8 1332 aaPredicted RBP27.01■■□□□ 1.91
TTC39C-202ENST00000317571 CD163L1Q9NR16 1453 aa27■■□□□ 1.91
TTC39C-202ENST00000317571 BCAR3O75815 825 aa26.99■■□□□ 1.91
TTC39C-202ENST00000317571 NSD2O96028 1365 aa26.99■■□□□ 1.91
TTC39C-202ENST00000317571 ABCC11Q96J66 1382 aa26.99■■□□□ 1.91
TTC39C-202ENST00000317571 SRPK2P78362 688 aaKnown RBP26.99■■□□□ 1.91
TTC39C-202ENST00000317571 RRP7AQ9Y3A4 280 aaKnown RBP26.99■■□□□ 1.91
TTC39C-202ENST00000317571 SPATA31D1Q6ZQQ2 1576 aa26.98■■□□□ 1.91
TTC39C-202ENST00000317571 TCERG1O14776 1098 aaKnown RBP26.98■■□□□ 1.91
TTC39C-202ENST00000317571 KDM2BQ8NHM5 1336 aa26.98■■□□□ 1.91
TTC39C-202ENST00000317571 A2ML1A8K2U0 1454 aa26.97■■□□□ 1.91
TTC39C-202ENST00000317571 NGEFQ8N5V2 710 aa26.97■■□□□ 1.91
TTC39C-202ENST00000317571 RUNDC1Q96C34 613 aa26.96■■□□□ 1.91
TTC39C-202ENST00000317571 SETD1AO15047 1707 aaKnown RBP26.95■■□□□ 1.91
TTC39C-202ENST00000317571 TCP11L2Q8N4U5 519 aa26.95■■□□□ 1.9
TTC39C-202ENST00000317571 PHF23Q9BUL5 403 aaPredicted RBP26.95■■□□□ 1.9
TTC39C-202ENST00000317571 NLRP1Q9C000 1473 aa26.95■■□□□ 1.9
TTC39C-202ENST00000317571 NEUROD2Q15784 382 aa26.95■■□□□ 1.9
TTC39C-202ENST00000317571 NINLQ9Y2I6 1382 aa26.94■■□□□ 1.9
TTC39C-202ENST00000317571 ARHGEF40Q8TER5 1519 aa26.93■■□□□ 1.9
TTC39C-202ENST00000317571 MLECQ14165 292 aa26.93■■□□□ 1.9
TTC39C-202ENST00000317571 GGNBP2Q9H3C7 697 aa26.92■■□□□ 1.9
TTC39C-202ENST00000317571 POGKQ9P215 609 aa26.92■■□□□ 1.9
TTC39C-202ENST00000317571 KIF13AQ9H1H9 1805 aa26.92■■□□□ 1.9
TTC39C-202ENST00000317571 STAG3Q9UJ98 1225 aa26.91■■□□□ 1.9
TTC39C-202ENST00000317571 ATAD2Q6PL18 1390 aa26.91■■□□□ 1.9
TTC39C-202ENST00000317571 PDE4AP27815 886 aa26.91■■□□□ 1.9
TTC39C-202ENST00000317571 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.91■■□□□ 1.9
TTC39C-202ENST00000317571 ANKRD26Q9UPS8 1709 aa26.91■■□□□ 1.9
TTC39C-202ENST00000317571 PPP6R1Q9UPN7 881 aa26.9■■□□□ 1.9
TTC39C-202ENST00000317571 PAK3O75914 559 aaPredicted RBP26.9■■□□□ 1.9
TTC39C-202ENST00000317571 COL3A1P02461 1466 aaPredicted RBP26.9■■□□□ 1.9
TTC39C-202ENST00000317571 CFAP53Q96M91 514 aa26.89■■□□□ 1.9
TTC39C-202ENST00000317571 RIMS2Q9UQ26 1411 aa26.89■■□□□ 1.89
TTC39C-202ENST00000317571 MS4A1P11836 297 aa26.88■■□□□ 1.89
TTC39C-202ENST00000317571 BACH2Q9BYV9 841 aa26.88■■□□□ 1.89
TTC39C-202ENST00000317571 ADGRB2O60241 1585 aa26.88■■□□□ 1.89
TTC39C-202ENST00000317571 FYB1O15117 783 aa26.88■■□□□ 1.89
TTC39C-202ENST00000317571 NRXN3Q9Y4C0 1643 aa26.87■■□□□ 1.89
TTC39C-202ENST00000317571 CDK19Q9BWU1 502 aa26.87■■□□□ 1.89
TTC39C-202ENST00000317571 WAPLQ7Z5K2 1190 aa26.85■■□□□ 1.89
TTC39C-202ENST00000317571 DLC1Q96QB1 1528 aa26.84■■□□□ 1.89
TTC39C-202ENST00000317571 NOP58Q9Y2X3 529 aaKnown RBP26.84■■□□□ 1.89
TTC39C-202ENST00000317571 U2AF1L5P0DN76 240 aaPredicted RBP26.84■■□□□ 1.89
TTC39C-202ENST00000317571 U2AF1Q01081 240 aaKnown RBP eCLIP26.84■■□□□ 1.89
TTC39C-202ENST00000317571 MED14O60244 1454 aa26.83■■□□□ 1.89
TTC39C-202ENST00000317571 ANP32AP39687 249 aaKnown RBP26.83■■□□□ 1.89
TTC39C-202ENST00000317571 CENPQQ7L2Z9 268 aaPredicted RBP26.82■■□□□ 1.88
TTC39C-202ENST00000317571 IPO9Q96P70 1041 aaKnown RBP26.82■■□□□ 1.88
TTC39C-202ENST00000317571 TERF2IPQ9NYB0 399 aa26.82■■□□□ 1.88
TTC39C-202ENST00000317571 CABP1Q9NZU7 370 aa26.82■■□□□ 1.88
TTC39C-202ENST00000317571 CCDC27Q2M243 656 aa26.81■■□□□ 1.88
TTC39C-202ENST00000317571 WDR63Q8IWG1 891 aa26.8■■□□□ 1.88
TTC39C-202ENST00000317571 KIF20BQ96Q89 1820 aa26.8■■□□□ 1.88
TTC39C-202ENST00000317571 PLEKHF1Q96S99 279 aa26.78■■□□□ 1.88
TTC39C-202ENST00000317571 RARSP54136 660 aaKnown RBP26.77■■□□□ 1.88
TTC39C-202ENST00000317571 PANK1Q8TE04 598 aa26.77■■□□□ 1.88
TTC39C-202ENST00000317571 METP08581 1390 aa26.76■■□□□ 1.87
TTC39C-202ENST00000317571 ZMYM3Q14202 1370 aa26.76■■□□□ 1.87
TTC39C-202ENST00000317571 NPM2Q86SE8 214 aaKnown RBP26.76■■□□□ 1.87
TTC39C-202ENST00000317571 TNNQ9UQP3 1299 aa26.75■■□□□ 1.87
TTC39C-202ENST00000317571 PDE3AQ14432 1141 aa26.74■■□□□ 1.87
TTC39C-202ENST00000317571 HDGFL2Q7Z4V5 671 aaPredicted RBP26.74■■□□□ 1.87
TTC39C-202ENST00000317571 U2SURPO15042 1029 aaKnown RBP26.74■■□□□ 1.87
TTC39C-202ENST00000317571 NCBP3Q53F19 620 aaKnown RBP26.73■■□□□ 1.87
TTC39C-202ENST00000317571 FBLN1P23142 703 aa26.72■■□□□ 1.87
TTC39C-202ENST00000317571 COG6Q9Y2V7 657 aa26.72■■□□□ 1.87
TTC39C-202ENST00000317571 PNPLA6Q8IY17 1366 aa26.72■■□□□ 1.87
TTC39C-202ENST00000317571 IGHDP01880 384 aa26.71■■□□□ 1.87
TTC39C-202ENST00000317571 ATP7BP35670 1465 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms