RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 TMEM132EQ6IEE7 984 aa26.02■■□□□ 1.76
EXOSC4-201ENST00000316052 UPF1Q92900 1129 aaKnown RBP eCLIP26.02■■□□□ 1.76
EXOSC4-201ENST00000316052 ADAMTS2O95450 1211 aa26.01■■□□□ 1.75
EXOSC4-201ENST00000316052 QTRT2Q9H974 415 aaKnown RBP26■■□□□ 1.75
EXOSC4-201ENST00000316052 LRPPRCP42704 1394 aaKnown RBP25.99■■□□□ 1.75
EXOSC4-201ENST00000316052 ESCO1Q5FWF5 840 aa25.99■■□□□ 1.75
EXOSC4-201ENST00000316052 TECPR2O15040 1411 aa25.98■■□□□ 1.75
EXOSC4-201ENST00000316052 NGLY1Q96IV0 654 aa25.98■■□□□ 1.75
EXOSC4-201ENST00000316052 CDK12Q9NYV4 1490 aaPredicted RBP25.98■■□□□ 1.75
EXOSC4-201ENST00000316052 ABCC11Q96J66 1382 aa25.97■■□□□ 1.75
EXOSC4-201ENST00000316052 CDC42BPGQ6DT37 1551 aa25.97■■□□□ 1.75
EXOSC4-201ENST00000316052 PIK3C2GO75747 1445 aa25.97■■□□□ 1.75
EXOSC4-201ENST00000316052 PLEKHH1Q9ULM0 1364 aa25.96■■□□□ 1.75
EXOSC4-201ENST00000316052 NUTM2FA1L443 756 aa25.95■■□□□ 1.74
EXOSC4-201ENST00000316052 RBM6P78332 1123 aaKnown RBP25.94■■□□□ 1.74
EXOSC4-201ENST00000316052 FOXO3O43524 673 aa25.93■■□□□ 1.74
EXOSC4-201ENST00000316052 NPHP3Q7Z494 1330 aa25.92■■□□□ 1.74
EXOSC4-201ENST00000316052 XPCQ01831 940 aaPredicted RBP25.92■■□□□ 1.74
EXOSC4-201ENST00000316052 YTHDC2Q9H6S0 1430 aaKnown RBP25.91■■□□□ 1.74
EXOSC4-201ENST00000316052 C14orf93Q9H972 538 aaKnown RBP25.91■■□□□ 1.74
EXOSC4-201ENST00000316052 PXDNQ92626 1479 aa25.91■■□□□ 1.74
EXOSC4-201ENST00000316052 KNDC1Q76NI1 1749 aa25.9■■□□□ 1.74
EXOSC4-201ENST00000316052 ACIN1Q9UKV3 1341 aaKnown RBP25.89■■□□□ 1.74
EXOSC4-201ENST00000316052 RGS12O14924 1447 aa25.89■■□□□ 1.74
EXOSC4-201ENST00000316052 COL22A1Q8NFW1 1626 aaPredicted RBP25.89■■□□□ 1.74
EXOSC4-201ENST00000316052 CFAP70Q5T0N1 1121 aa25.88■■□□□ 1.73
EXOSC4-201ENST00000316052 FNBP4Q8N3X1 1017 aaPredicted RBP25.88■■□□□ 1.73
EXOSC4-201ENST00000316052 USP21Q9UK80 565 aa25.88■■□□□ 1.73
EXOSC4-201ENST00000316052 SIRT1Q96EB6 747 aa25.87■■□□□ 1.73
EXOSC4-201ENST00000316052 NRXN1Q9ULB1 1477 aa25.86■■□□□ 1.73
EXOSC4-201ENST00000316052 RAB3GAP2Q9H2M9 1393 aa25.86■■□□□ 1.73
EXOSC4-201ENST00000316052 MYOM2P54296 1465 aa25.85■■□□□ 1.73
EXOSC4-201ENST00000316052 FMN2Q9NZ56 1722 aa25.84■■□□□ 1.73
EXOSC4-201ENST00000316052 TRPC5Q9UL62 973 aaPredicted RBP25.82■■□□□ 1.72
EXOSC4-201ENST00000316052 DHX57Q6P158 1386 aaKnown RBP25.81■■□□□ 1.72
EXOSC4-201ENST00000316052 RGPD8O14715 1765 aaPredicted RBP25.79■■□□□ 1.72
EXOSC4-201ENST00000316052 ATRNO75882 1429 aa25.79■■□□□ 1.72
EXOSC4-201ENST00000316052 SAFB2Q14151 953 aaKnown RBP eCLIP25.78■■□□□ 1.72
EXOSC4-201ENST00000316052 PRAM1Q96QH2 718 aa25.78■■□□□ 1.72
EXOSC4-201ENST00000316052 SPATA31A3Q5VYP0 1347 aa25.78■■□□□ 1.72
EXOSC4-201ENST00000316052 BCL9LQ86UU0 1499 aa25.78■■□□□ 1.72
EXOSC4-201ENST00000316052 KRT28Q7Z3Y7 464 aa25.77■■□□□ 1.72
EXOSC4-201ENST00000316052 MARF1Q9Y4F3 1742 aaKnown RBP25.77■■□□□ 1.72
EXOSC4-201ENST00000316052 EP400Q96L91 3159 aa25.77■■□□□ 1.72
EXOSC4-201ENST00000316052 PHF8Q9UPP1 1060 aa25.75■■□□□ 1.71
EXOSC4-201ENST00000316052 KIF1AQ12756 1690 aa25.74■■□□□ 1.71
EXOSC4-201ENST00000316052 POGKQ9P215 609 aa25.71■■□□□ 1.71
EXOSC4-201ENST00000316052 KDM2AQ9Y2K7 1162 aa25.71■■□□□ 1.71
EXOSC4-201ENST00000316052 SRCAPQ6ZRS2 3230 aa25.7■■□□□ 1.7
EXOSC4-201ENST00000316052 ADGRB1O14514 1584 aa25.69■■□□□ 1.7
EXOSC4-201ENST00000316052 DLC1Q96QB1 1528 aa25.69■■□□□ 1.7
EXOSC4-201ENST00000316052 GJD4Q96KN9 370 aaPredicted RBP25.69■■□□□ 1.7
EXOSC4-201ENST00000316052 ATAD2Q6PL18 1390 aa25.69■■□□□ 1.7
EXOSC4-201ENST00000316052 DCAF11Q8TEB1 546 aa25.68■■□□□ 1.7
EXOSC4-201ENST00000316052 TRAK1Q9UPV9 953 aa25.68■■□□□ 1.7
EXOSC4-201ENST00000316052 PSME1Q06323 249 aa25.67■■□□□ 1.7
EXOSC4-201ENST00000316052 CABLES1Q8TDN4 633 aa25.67■■□□□ 1.7
EXOSC4-201ENST00000316052 UNC5CLQ8IV45 518 aa25.66■■□□□ 1.7
EXOSC4-201ENST00000316052 TNS3Q68CZ2 1445 aa25.65■■□□□ 1.7
EXOSC4-201ENST00000316052 SLIT2O94813 1529 aa25.65■■□□□ 1.7
EXOSC4-201ENST00000316052 PMFBP1Q8TBY8 1022 aa25.65■■□□□ 1.7
EXOSC4-201ENST00000316052 HIRIP3Q9BW71 556 aaPredicted RBP25.65■■□□□ 1.7
EXOSC4-201ENST00000316052 USP32Q8NFA0 1604 aa25.65■■□□□ 1.7
EXOSC4-201ENST00000316052 PLEKHG5O94827 1062 aa25.64■■□□□ 1.7
EXOSC4-201ENST00000316052 HRCP23327 699 aa25.64■■□□□ 1.7
EXOSC4-201ENST00000316052 SBNO1A3KN83 1393 aa25.63■■□□□ 1.69
EXOSC4-201ENST00000316052 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.62■■□□□ 1.69
EXOSC4-201ENST00000316052 ANKARQ7Z5J8 1434 aa25.62■■□□□ 1.69
EXOSC4-201ENST00000316052 MINK1Q8N4C8 1332 aaPredicted RBP25.62■■□□□ 1.69
EXOSC4-201ENST00000316052 LMOD2Q6P5Q4 547 aa25.61■■□□□ 1.69
EXOSC4-201ENST00000316052 ADGRB2O60241 1585 aa25.61■■□□□ 1.69
EXOSC4-201ENST00000316052 HAP1P54257 671 aaPredicted RBP25.6■■□□□ 1.69
EXOSC4-201ENST00000316052 PRR36Q9H6K5 1346 aa25.6■■□□□ 1.69
EXOSC4-201ENST00000316052 RALGAPBQ86X10 1494 aa25.6■■□□□ 1.69
EXOSC4-201ENST00000316052 GLI3P10071 1580 aa25.59■■□□□ 1.69
EXOSC4-201ENST00000316052 STAC3Q96MF2 364 aa25.58■■□□□ 1.69
EXOSC4-201ENST00000316052 ARHGEF10O15013 1369 aa25.56■■□□□ 1.68
EXOSC4-201ENST00000316052 WASLO00401 505 aaPredicted RBP25.56■■□□□ 1.68
EXOSC4-201ENST00000316052 FAM83GA6ND36 823 aa25.55■■□□□ 1.68
EXOSC4-201ENST00000316052 ABCA3Q99758 1704 aa25.54■■□□□ 1.68
EXOSC4-201ENST00000316052 VPS72Q15906 364 aa25.53■■□□□ 1.68
EXOSC4-201ENST00000316052 TRPM3Q9HCF6 1732 aaPredicted RBP25.53■■□□□ 1.68
EXOSC4-201ENST00000316052 BRWD3Q6RI45 1802 aa25.51■■□□□ 1.67
EXOSC4-201ENST00000316052 CCDC125Q86Z20 511 aa25.51■■□□□ 1.67
EXOSC4-201ENST00000316052 TULP4Q9NRJ4 1543 aa25.51■■□□□ 1.67
EXOSC4-201ENST00000316052 PLCH1Q4KWH8 1693 aa25.51■■□□□ 1.67
EXOSC4-201ENST00000316052 EIF3AQ14152 1382 aaKnown RBP25.5■■□□□ 1.67
EXOSC4-201ENST00000316052 GPRASP1Q5JY77 1395 aa25.5■■□□□ 1.67
EXOSC4-201ENST00000316052 NWD2Q9ULI1 1742 aa25.49■■□□□ 1.67
EXOSC4-201ENST00000316052 SEPT12Q8IYM1 358 aa25.49■■□□□ 1.67
EXOSC4-201ENST00000316052 ONECUT3O60422 494 aaPredicted RBP25.48■■□□□ 1.67
EXOSC4-201ENST00000316052 ARHGEF28Q8N1W1 1705 aaKnown RBP25.48■■□□□ 1.67
EXOSC4-201ENST00000316052 ALS2Q96Q42 1657 aa25.48■■□□□ 1.67
EXOSC4-201ENST00000316052 NGDNQ8NEJ9 315 aaKnown RBP25.47■■□□□ 1.67
EXOSC4-201ENST00000316052 CCDC9Q9Y3X0 531 aaKnown RBP25.47■■□□□ 1.67
EXOSC4-201ENST00000316052 NUDT16Q96DE0 195 aaKnown RBP25.45■■□□□ 1.66
EXOSC4-201ENST00000316052 PAK3O75914 559 aaPredicted RBP25.43■■□□□ 1.66
EXOSC4-201ENST00000316052 BTG4Q9NY30 223 aa25.43■■□□□ 1.66
EXOSC4-201ENST00000316052 ZRANB1Q9UGI0 708 aa25.43■■□□□ 1.66
EXOSC4-201ENST00000316052 CDK19Q9BWU1 502 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms