RNA–Protein interactions for RNA: ENST00000315732.2

LSM10-201, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM10, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-201ENST00000315732 WAPLQ7Z5K2 1190 aa21.75■■□□□ 1.07
LSM10-201ENST00000315732 AFF2P51816 1311 aa21.75■■□□□ 1.07
LSM10-201ENST00000315732 C8orf37Q96NL8 207 aa21.73■■□□□ 1.07
LSM10-201ENST00000315732 TECPR2O15040 1411 aa21.72■■□□□ 1.07
LSM10-201ENST00000315732 SIRT1Q96EB6 747 aa21.72■■□□□ 1.07
LSM10-201ENST00000315732 C14orf93Q9H972 538 aaKnown RBP21.72■■□□□ 1.07
LSM10-201ENST00000315732 PIK3C2GO75747 1445 aa21.72■■□□□ 1.07
LSM10-201ENST00000315732 RAB3GAP2Q9H2M9 1393 aa21.71■■□□□ 1.07
LSM10-201ENST00000315732 NPHP3Q7Z494 1330 aa21.7■■□□□ 1.06
LSM10-201ENST00000315732 ADAMTS2O95450 1211 aa21.69■■□□□ 1.06
LSM10-201ENST00000315732 NGLY1Q96IV0 654 aa21.69■■□□□ 1.06
LSM10-201ENST00000315732 QTRT2Q9H974 415 aaKnown RBP21.69■■□□□ 1.06
LSM10-201ENST00000315732 LAMC1P11047 1609 aa21.67■■□□□ 1.06
LSM10-201ENST00000315732 YTHDC2Q9H6S0 1430 aaKnown RBP21.67■■□□□ 1.06
LSM10-201ENST00000315732 FOXO3O43524 673 aa21.67■■□□□ 1.06
LSM10-201ENST00000315732 CFAP70Q5T0N1 1121 aa21.67■■□□□ 1.06
LSM10-201ENST00000315732 CDC42BPGQ6DT37 1551 aa21.66■■□□□ 1.06
LSM10-201ENST00000315732 DHX57Q6P158 1386 aaKnown RBP21.66■■□□□ 1.06
LSM10-201ENST00000315732 PLEKHH1Q9ULM0 1364 aa21.66■■□□□ 1.06
LSM10-201ENST00000315732 NUTM2FA1L443 756 aa21.66■■□□□ 1.06
LSM10-201ENST00000315732 HRCP23327 699 aa21.65■■□□□ 1.06
LSM10-201ENST00000315732 RBM6P78332 1123 aaKnown RBP21.65■■□□□ 1.06
LSM10-201ENST00000315732 IFT172Q9UG01 1749 aa21.64■■□□□ 1.06
LSM10-201ENST00000315732 UPF1Q92900 1129 aaKnown RBP eCLIP21.63■■□□□ 1.05
LSM10-201ENST00000315732 CDK12Q9NYV4 1490 aaPredicted RBP21.63■■□□□ 1.05
LSM10-201ENST00000315732 NRXN1Q9ULB1 1477 aa21.63■■□□□ 1.05
LSM10-201ENST00000315732 MYOM2P54296 1465 aa21.61■■□□□ 1.05
LSM10-201ENST00000315732 XPCQ01831 940 aaPredicted RBP21.61■■□□□ 1.05
LSM10-201ENST00000315732 FNBP4Q8N3X1 1017 aaPredicted RBP21.6■■□□□ 1.05
LSM10-201ENST00000315732 USP21Q9UK80 565 aa21.6■■□□□ 1.05
LSM10-201ENST00000315732 STAC3Q96MF2 364 aa21.59■■□□□ 1.05
LSM10-201ENST00000315732 PRAM1Q96QH2 718 aa21.59■■□□□ 1.05
LSM10-201ENST00000315732 PXDNQ92626 1479 aa21.58■■□□□ 1.05
LSM10-201ENST00000315732 POGKQ9P215 609 aa21.57■■□□□ 1.04
LSM10-201ENST00000315732 TRPC5Q9UL62 973 aaPredicted RBP21.57■■□□□ 1.04
LSM10-201ENST00000315732 KNDC1Q76NI1 1749 aa21.57■■□□□ 1.04
LSM10-201ENST00000315732 KRT28Q7Z3Y7 464 aa21.56■■□□□ 1.04
LSM10-201ENST00000315732 DCAF11Q8TEB1 546 aa21.56■■□□□ 1.04
LSM10-201ENST00000315732 KDM2AQ9Y2K7 1162 aa21.56■■□□□ 1.04
LSM10-201ENST00000315732 SAFB2Q14151 953 aaKnown RBP eCLIP21.55■■□□□ 1.04
LSM10-201ENST00000315732 PHF8Q9UPP1 1060 aa21.55■■□□□ 1.04
LSM10-201ENST00000315732 SPATA31A3Q5VYP0 1347 aa21.54■■□□□ 1.04
LSM10-201ENST00000315732 PSME1Q06323 249 aa21.53■■□□□ 1.04
LSM10-201ENST00000315732 COL22A1Q8NFW1 1626 aaPredicted RBP21.53■■□□□ 1.04
LSM10-201ENST00000315732 TRAK1Q9UPV9 953 aa21.52■■□□□ 1.04
LSM10-201ENST00000315732 RGS12O14924 1447 aa21.51■■□□□ 1.03
LSM10-201ENST00000315732 DLC1Q96QB1 1528 aa21.49■■□□□ 1.03
LSM10-201ENST00000315732 FMN2Q9NZ56 1722 aa21.49■■□□□ 1.03
LSM10-201ENST00000315732 ATRNO75882 1429 aa21.47■■□□□ 1.03
LSM10-201ENST00000315732 BCL9LQ86UU0 1499 aa21.46■■□□□ 1.03
LSM10-201ENST00000315732 KIF1AQ12756 1690 aa21.46■■□□□ 1.03
LSM10-201ENST00000315732 ADGRB1O14514 1584 aa21.45■■□□□ 1.02
LSM10-201ENST00000315732 HIRIP3Q9BW71 556 aaPredicted RBP21.45■■□□□ 1.02
LSM10-201ENST00000315732 SBNO1A3KN83 1393 aa21.45■■□□□ 1.02
LSM10-201ENST00000315732 ANKARQ7Z5J8 1434 aa21.45■■□□□ 1.02
LSM10-201ENST00000315732 HAP1P54257 671 aaPredicted RBP21.44■■□□□ 1.02
LSM10-201ENST00000315732 UNC5CLQ8IV45 518 aa21.44■■□□□ 1.02
LSM10-201ENST00000315732 PMFBP1Q8TBY8 1022 aa21.44■■□□□ 1.02
LSM10-201ENST00000315732 GJD4Q96KN9 370 aaPredicted RBP21.44■■□□□ 1.02
LSM10-201ENST00000315732 LMOD2Q6P5Q4 547 aa21.43■■□□□ 1.02
LSM10-201ENST00000315732 MINK1Q8N4C8 1332 aaPredicted RBP21.43■■□□□ 1.02
LSM10-201ENST00000315732 WASLO00401 505 aaPredicted RBP21.42■■□□□ 1.02
LSM10-201ENST00000315732 TNS3Q68CZ2 1445 aa21.42■■□□□ 1.02
LSM10-201ENST00000315732 ATAD2Q6PL18 1390 aa21.42■■□□□ 1.02
LSM10-201ENST00000315732 EIF3AQ14152 1382 aaKnown RBP21.41■■□□□ 1.02
LSM10-201ENST00000315732 CABLES1Q8TDN4 633 aa21.41■■□□□ 1.02
LSM10-201ENST00000315732 ARHGEF10O15013 1369 aa21.4■■□□□ 1.02
LSM10-201ENST00000315732 SLIT2O94813 1529 aa21.38■■□□□ 1.01
LSM10-201ENST00000315732 GPRASP1Q5JY77 1395 aa21.37■■□□□ 1.01
LSM10-201ENST00000315732 PLEKHG5O94827 1062 aa21.37■■□□□ 1.01
LSM10-201ENST00000315732 ADGRB2O60241 1585 aa21.36■■□□□ 1.01
LSM10-201ENST00000315732 PRR36Q9H6K5 1346 aa21.36■■□□□ 1.01
LSM10-201ENST00000315732 RGPD8O14715 1765 aaPredicted RBP21.36■■□□□ 1.01
LSM10-201ENST00000315732 NGDNQ8NEJ9 315 aaKnown RBP21.35■■□□□ 1.01
LSM10-201ENST00000315732 MARF1Q9Y4F3 1742 aaKnown RBP21.34■■□□□ 1.01
LSM10-201ENST00000315732 FAM83GA6ND36 823 aa21.33■■□□□ 1.01
LSM10-201ENST00000315732 VPS72Q15906 364 aa21.33■■□□□ 1.01
LSM10-201ENST00000315732 CCDC125Q86Z20 511 aa21.33■■□□□ 1.01
LSM10-201ENST00000315732 NUDT16Q96DE0 195 aaKnown RBP21.32■■□□□ 1
LSM10-201ENST00000315732 TULP4Q9NRJ4 1543 aa21.32■■□□□ 1
LSM10-201ENST00000315732 USP32Q8NFA0 1604 aa21.32■■□□□ 1
LSM10-201ENST00000315732 RALGAPBQ86X10 1494 aa21.31■■□□□ 1
LSM10-201ENST00000315732 PAK3O75914 559 aaPredicted RBP21.3■■□□□ 1
LSM10-201ENST00000315732 CDK19Q9BWU1 502 aa21.3■■□□□ 1
LSM10-201ENST00000315732 CCDC9Q9Y3X0 531 aaKnown RBP21.29■■□□□ 1
LSM10-201ENST00000315732 EP400Q96L91 3159 aa21.28■■□□□ 1
LSM10-201ENST00000315732 ONECUT3O60422 494 aaPredicted RBP21.28■■□□□ 1
LSM10-201ENST00000315732 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.27■■□□□ 1
LSM10-201ENST00000315732 NBPF1Q3BBV0 1214 aa21.27■■□□□ 1
LSM10-201ENST00000315732 SEPT12Q8IYM1 358 aa21.27■■□□□ 1
LSM10-201ENST00000315732 BTG4Q9NY30 223 aa21.25■□□□□ 0.99
LSM10-201ENST00000315732 CCDC61Q9Y6R9 512 aa21.25■□□□□ 0.99
LSM10-201ENST00000315732 GLI3P10071 1580 aa21.24■□□□□ 0.99
LSM10-201ENST00000315732 ATP7BP35670 1465 aa21.22■□□□□ 0.99
LSM10-201ENST00000315732 PLEKHG3A1L390 1219 aa21.22■□□□□ 0.99
LSM10-201ENST00000315732 NBPF8Q3BBV2 869 aa21.22■□□□□ 0.99
LSM10-201ENST00000315732 TRPM3Q9HCF6 1732 aaPredicted RBP21.21■□□□□ 0.99
LSM10-201ENST00000315732 ACEP12821 1306 aa21.21■□□□□ 0.99
LSM10-201ENST00000315732 ARHGEF28Q8N1W1 1705 aaKnown RBP21.21■□□□□ 0.99
LSM10-201ENST00000315732 L3MBTL2Q969R5 705 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms