RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 TCERG1O14776 1098 aaKnown RBP15.15■□□□□ 0.02
LDLRAD3-201ENST00000315571 TNNT2P45379 298 aaPredicted RBP15.14■□□□□ 0.01
LDLRAD3-201ENST00000315571 EID1Q9Y6B2 187 aa15.14■□□□□ 0.01
LDLRAD3-201ENST00000315571 MYOM2P54296 1465 aa15.14■□□□□ 0.01
LDLRAD3-201ENST00000315571 MYO3AQ8NEV4 1616 aa15.14■□□□□ 0.01
LDLRAD3-201ENST00000315571 TMEM2Q9UHN6 1383 aa15.13■□□□□ 0.01
LDLRAD3-201ENST00000315571 ROCK2O75116 1388 aaKnown RBP15.13■□□□□ 0.01
LDLRAD3-201ENST00000315571 NEXMIFQ5QGS0 1516 aa15.12■□□□□ 0.01
LDLRAD3-201ENST00000315571 CARD11Q9BXL7 1154 aa15.12■□□□□ 0.01
LDLRAD3-201ENST00000315571 CEP170BQ9Y4F5 1589 aaPredicted RBP15.12■□□□□ 0.01
LDLRAD3-201ENST00000315571 TXNDC2Q86VQ3 553 aa15.11■□□□□ 0.01
LDLRAD3-201ENST00000315571 CANXP27824 592 aaKnown RBP15.11■□□□□ 0.01
LDLRAD3-201ENST00000315571 MYO5BQ9ULV0 1848 aa15.11■□□□□ 0.01
LDLRAD3-201ENST00000315571 CFAP70Q5T0N1 1121 aa15.1■□□□□ 0.01
LDLRAD3-201ENST00000315571 RALGAPBQ86X10 1494 aa15.1■□□□□ 0.01
LDLRAD3-201ENST00000315571 UBR1Q8IWV7 1749 aa15.1■□□□□ 0.01
LDLRAD3-201ENST00000315571 SETD1BQ9UPS6 1966 aaKnown RBP15.1■□□□□ 0.01
LDLRAD3-201ENST00000315571 ZFYVE9O95405 1425 aa15.09■□□□□ 0.01
LDLRAD3-201ENST00000315571 NBPF1Q3BBV0 1214 aa15.09■□□□□ 0.01
LDLRAD3-201ENST00000315571 PPLO60437 1756 aa15.09■□□□□ 0.01
LDLRAD3-201ENST00000315571 KDM5AP29375 1690 aaKnown RBP15.09■□□□□ 0.01
LDLRAD3-201ENST00000315571 CDK11BP21127 795 aaKnown RBP15.08■□□□□ 0.01
LDLRAD3-201ENST00000315571 FAM13BQ9NYF5 915 aa15.08■□□□□ 0.01
LDLRAD3-201ENST00000315571 EIF4G2P78344 907 aaKnown RBP eCLIP15.08■□□□□ 06e-6■■■■■ 27.4
LDLRAD3-201ENST00000315571 ZHX1Q9UKY1 873 aaPredicted RBP15.08■□□□□ 0
LDLRAD3-201ENST00000315571 PIK3C2GO75747 1445 aa15.08■□□□□ 0
LDLRAD3-201ENST00000315571 IFT172Q9UG01 1749 aa15.08■□□□□ 0
LDLRAD3-201ENST00000315571 CHMP4BQ9H444 224 aaKnown RBP15.07■□□□□ 0
LDLRAD3-201ENST00000315571 NRXN1Q9ULB1 1477 aa15.07■□□□□ 0
LDLRAD3-201ENST00000315571 NCLP19338 710 aaKnown RBP15.07■□□□□ 0
LDLRAD3-201ENST00000315571 PAXIP1Q6ZW49 1069 aaPredicted RBP15.07■□□□□ 0
LDLRAD3-201ENST00000315571 ANKLE2Q86XL3 938 aa15.07■□□□□ 0
LDLRAD3-201ENST00000315571 SLKQ9H2G2 1235 aaPredicted RBP15.07■□□□□ 0
LDLRAD3-201ENST00000315571 LTKP29376 864 aa15.06■□□□□ 0
LDLRAD3-201ENST00000315571 C14orf93Q9H972 538 aaKnown RBP15.06■□□□□ 0
LDLRAD3-201ENST00000315571 GOLGA6L3A6NEY3 463 aa15.06■□□□□ 0
LDLRAD3-201ENST00000315571 SLIT1O75093 1534 aa15.05■□□□□ -0
LDLRAD3-201ENST00000315571 TRPM1Q7Z4N2 1603 aa15.04■□□□□ -0
LDLRAD3-201ENST00000315571 ARHGAP23Q9P227 1491 aa15.04■□□□□ -0
LDLRAD3-201ENST00000315571 HSPA5P11021 654 aaKnown RBP15.04■□□□□ -0
LDLRAD3-201ENST00000315571 PDCL3Q9H2J4 239 aa15.04■□□□□ -0
LDLRAD3-201ENST00000315571 ZNF142P52746 1687 aaPredicted RBP15.04■□□□□ -0
LDLRAD3-201ENST00000315571 USP47Q96K76 1375 aa15.04■□□□□ -0
LDLRAD3-201ENST00000315571 POGKQ9P215 609 aa15.04■□□□□ -0
LDLRAD3-201ENST00000315571 TMEM132EQ6IEE7 984 aa15.03■□□□□ -0
LDLRAD3-201ENST00000315571 NAP1L2Q9ULW6 460 aaPredicted RBP15.03■□□□□ -0
LDLRAD3-201ENST00000315571 SCAF11Q99590 1463 aaKnown RBP15.03■□□□□ -0
LDLRAD3-201ENST00000315571 GPRASP1Q5JY77 1395 aa15.03■□□□□ -0
LDLRAD3-201ENST00000315571 PLEKHG1Q9ULL1 1385 aa15.02■□□□□ -0
LDLRAD3-201ENST00000315571 BACH2Q9BYV9 841 aa15.02□□□□□ -0.01
LDLRAD3-201ENST00000315571 HSPA2P54652 639 aa15.01□□□□□ -0.01
LDLRAD3-201ENST00000315571 MYH16Q9H6N6 1097 aa15.01□□□□□ -0.01
LDLRAD3-201ENST00000315571 PRDM10Q9NQV6 1147 aa15.01□□□□□ -0.01
LDLRAD3-201ENST00000315571 SLC26A8Q96RN1 970 aa15□□□□□ -0.01
LDLRAD3-201ENST00000315571 ANP32BQ92688 251 aaKnown RBP15□□□□□ -0.01
LDLRAD3-201ENST00000315571 STK26Q9P289 416 aa15□□□□□ -0.01
LDLRAD3-201ENST00000315571 TAF7LQ5H9L4 462 aa15□□□□□ -0.01
LDLRAD3-201ENST00000315571 TRAK1Q9UPV9 953 aa14.99□□□□□ -0.01
LDLRAD3-201ENST00000315571 EIF3AQ14152 1382 aaKnown RBP14.99□□□□□ -0.01
LDLRAD3-201ENST00000315571 KIAA1210Q9ULL0 1709 aa14.99□□□□□ -0.01
LDLRAD3-201ENST00000315571 NCKAP5LQ9HCH0 1330 aa14.98□□□□□ -0.01
LDLRAD3-201ENST00000315571 PLCD3Q8N3E9 789 aa14.98□□□□□ -0.01
LDLRAD3-201ENST00000315571 ALKQ9UM73 1620 aa14.98□□□□□ -0.01
LDLRAD3-201ENST00000315571 ST20-MTHFSA0A0A6YYL1 179 aa14.98□□□□□ -0.01
LDLRAD3-201ENST00000315571 LAMC1P11047 1609 aa14.98□□□□□ -0.01
LDLRAD3-201ENST00000315571 EXOC6Q8TAG9 804 aa14.98□□□□□ -0.01
LDLRAD3-201ENST00000315571 SETBP1Q9Y6X0 1596 aa14.97□□□□□ -0.01
LDLRAD3-201ENST00000315571 CALD1Q05682 793 aaKnown RBP14.97□□□□□ -0.01
LDLRAD3-201ENST00000315571 MAPK8IP2Q13387 824 aaPredicted RBP14.96□□□□□ -0.01
LDLRAD3-201ENST00000315571 CCDC184Q52MB2 194 aa14.96□□□□□ -0.01
LDLRAD3-201ENST00000315571 NUDCQ9Y266 331 aa14.96□□□□□ -0.01
LDLRAD3-201ENST00000315571 ZBED9Q6R2W3 1325 aa14.96□□□□□ -0.02
LDLRAD3-201ENST00000315571 CLCN1P35523 988 aa14.96□□□□□ -0.02
LDLRAD3-201ENST00000315571 SPRYD3Q8NCJ5 442 aa14.96□□□□□ -0.02
LDLRAD3-201ENST00000315571 TBX22Q9Y458 520 aa14.95□□□□□ -0.02
LDLRAD3-201ENST00000315571 LMTK3Q96Q04 1460 aa14.95□□□□□ -0.02
LDLRAD3-201ENST00000315571 NPHP4O75161 1426 aaPredicted RBP14.95□□□□□ -0.02
LDLRAD3-201ENST00000315571 ADAMTS13Q76LX8 1427 aa14.95□□□□□ -0.02
LDLRAD3-201ENST00000315571 TPM2P07951 284 aa14.95□□□□□ -0.02
LDLRAD3-201ENST00000315571 ADGRB1O14514 1584 aa14.94□□□□□ -0.02
LDLRAD3-201ENST00000315571 METP08581 1390 aa14.94□□□□□ -0.02
LDLRAD3-201ENST00000315571 YTHDC2Q9H6S0 1430 aaKnown RBP14.94□□□□□ -0.02
LDLRAD3-201ENST00000315571 SKAP1Q86WV1 359 aa14.94□□□□□ -0.02
LDLRAD3-201ENST00000315571 BECN1Q14457 450 aa14.94□□□□□ -0.02
LDLRAD3-201ENST00000315571 IQGAP1P46940 1657 aa14.93□□□□□ -0.02
LDLRAD3-201ENST00000315571 KIAA1211Q6ZU35 1233 aa14.93□□□□□ -0.02
LDLRAD3-201ENST00000315571 CENPJQ9HC77 1338 aaPredicted RBP14.92□□□□□ -0.02
LDLRAD3-201ENST00000315571 NRXN3Q9Y4C0 1643 aa14.92□□□□□ -0.02
LDLRAD3-201ENST00000315571 LRPPRCP42704 1394 aaKnown RBP14.92□□□□□ -0.02
LDLRAD3-201ENST00000315571 ASXL1Q8IXJ9 1541 aa14.92□□□□□ -0.02
LDLRAD3-201ENST00000315571 SAFB2Q14151 953 aaKnown RBP eCLIP14.92□□□□□ -0.023e-6■□□□□ 11.2
LDLRAD3-201ENST00000315571 ESPNB1AK53 854 aa14.91□□□□□ -0.02
LDLRAD3-201ENST00000315571 MS4A1P11836 297 aa14.91□□□□□ -0.02
LDLRAD3-201ENST00000315571 MSNP26038 577 aaKnown RBP14.9□□□□□ -0.02
LDLRAD3-201ENST00000315571 ZBTB7CA1YPR0 619 aa14.9□□□□□ -0.02
LDLRAD3-201ENST00000315571 PRAM1Q96QH2 718 aa14.9□□□□□ -0.02
LDLRAD3-201ENST00000315571 DIP2AQ14689 1571 aa14.9□□□□□ -0.02
LDLRAD3-201ENST00000315571 TMF1P82094 1093 aa14.89□□□□□ -0.03
LDLRAD3-201ENST00000315571 PANK2Q9BZ23 570 aa14.89□□□□□ -0.03
LDLRAD3-201ENST00000315571 MED14O60244 1454 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms