RNA–Protein interactions for RNA: ENST00000315274.6

MMP1-201, Transcript of matrix metallopeptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP1, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1-201ENST00000315274 TMF1P82094 1093 aa13.31□□□□□ -0.28
MMP1-201ENST00000315274 POLR3GLQ9BT43 218 aa13.31□□□□□ -0.28
MMP1-201ENST00000315274 C11orf95C9JLR9 678 aaPredicted RBP13.3□□□□□ -0.28
MMP1-201ENST00000315274 NKTRP30414 1462 aaKnown RBP13.29□□□□□ -0.28
MMP1-201ENST00000315274 SLC24A1O60721 1099 aa13.29□□□□□ -0.28
MMP1-201ENST00000315274 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.28□□□□□ -0.28
MMP1-201ENST00000315274 TMEM94Q12767 1356 aa13.28□□□□□ -0.28
MMP1-201ENST00000315274 EVC2Q86UK5 1308 aa13.28□□□□□ -0.28
MMP1-201ENST00000315274 SRPK2P78362 688 aaKnown RBP13.28□□□□□ -0.28
MMP1-201ENST00000315274 CDK19Q9BWU1 502 aa13.28□□□□□ -0.28
MMP1-201ENST00000315274 DISP3Q9P2K9 1392 aa13.28□□□□□ -0.28
MMP1-201ENST00000315274 SBNO2Q9Y2G9 1366 aa13.27□□□□□ -0.28
MMP1-201ENST00000315274 NUTM2FA1L443 756 aa13.27□□□□□ -0.29
MMP1-201ENST00000315274 WASLO00401 505 aaPredicted RBP13.27□□□□□ -0.29
MMP1-201ENST00000315274 CABP2Q9NPB3 220 aa13.27□□□□□ -0.29
MMP1-201ENST00000315274 LRRC7Q96NW7 1537 aa13.26□□□□□ -0.29
MMP1-201ENST00000315274 CDCA8Q53HL2 280 aa13.25□□□□□ -0.29
MMP1-201ENST00000315274 KIF7Q2M1P5 1343 aa13.25□□□□□ -0.29
MMP1-201ENST00000315274 WASHC2AQ641Q2 1341 aa13.25□□□□□ -0.29
MMP1-201ENST00000315274 C19orf44Q9H6X5 657 aa13.25□□□□□ -0.29
MMP1-201ENST00000315274 NALCNQ8IZF0 1738 aa13.24□□□□□ -0.29
MMP1-201ENST00000315274 ADGRL3Q9HAR2 1447 aa13.24□□□□□ -0.29
MMP1-201ENST00000315274 TULP4Q9NRJ4 1543 aa13.23□□□□□ -0.29
MMP1-201ENST00000315274 XIRP1Q702N8 1843 aaKnown RBP13.23□□□□□ -0.29
MMP1-201ENST00000315274 CCDC7Q96M83 1385 aa13.23□□□□□ -0.29
MMP1-201ENST00000315274 ATF3P18847 181 aa13.23□□□□□ -0.29
MMP1-201ENST00000315274 LTBP4Q8N2S1 1624 aa13.23□□□□□ -0.29
MMP1-201ENST00000315274 MSH6P52701 1360 aa13.22□□□□□ -0.29
MMP1-201ENST00000315274 NCOA3Q9Y6Q9 1424 aa13.22□□□□□ -0.29
MMP1-201ENST00000315274 TMC1Q8TDI8 760 aa13.22□□□□□ -0.29
MMP1-201ENST00000315274 NUDT16Q96DE0 195 aaKnown RBP13.21□□□□□ -0.29
MMP1-201ENST00000315274 ADGRB2O60241 1585 aa13.21□□□□□ -0.3
MMP1-201ENST00000315274 DDX10Q13206 875 aaKnown RBP13.2□□□□□ -0.3
MMP1-201ENST00000315274 CADPS2Q86UW7 1296 aa13.2□□□□□ -0.3
MMP1-201ENST00000315274 PUS7Q96PZ0 661 aaKnown RBP13.19□□□□□ -0.3
MMP1-201ENST00000315274 SLC12A5Q9H2X9 1139 aa13.19□□□□□ -0.3
MMP1-201ENST00000315274 RGPD8O14715 1765 aaPredicted RBP13.18□□□□□ -0.3
MMP1-201ENST00000315274 CABP1Q9NZU7 370 aa13.18□□□□□ -0.3
MMP1-201ENST00000315274 CCDC61Q9Y6R9 512 aa13.18□□□□□ -0.3
MMP1-201ENST00000315274 PRR36Q9H6K5 1346 aa13.18□□□□□ -0.3
MMP1-201ENST00000315274 CDC42BPGQ6DT37 1551 aa13.18□□□□□ -0.3
MMP1-201ENST00000315274 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
MMP1-201ENST00000315274 ESCO1Q5FWF5 840 aa13.17□□□□□ -0.3
MMP1-201ENST00000315274 FMN2Q9NZ56 1722 aa13.17□□□□□ -0.3
MMP1-201ENST00000315274 PMFBP1Q8TBY8 1022 aa13.16□□□□□ -0.3
MMP1-201ENST00000315274 DCCP43146 1447 aa13.16□□□□□ -0.3
MMP1-201ENST00000315274 ATP7BP35670 1465 aa13.15□□□□□ -0.3
MMP1-201ENST00000315274 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
MMP1-201ENST00000315274 ORAI2Q96SN7 254 aa13.15□□□□□ -0.3
MMP1-201ENST00000315274 SLAIN2Q9P270 581 aa13.15□□□□□ -0.3
MMP1-201ENST00000315274 USP32Q8NFA0 1604 aa13.14□□□□□ -0.31
MMP1-201ENST00000315274 CERKQ8TCT0 537 aa13.14□□□□□ -0.31
MMP1-201ENST00000315274 PANK3Q9H999 370 aa13.14□□□□□ -0.31
MMP1-201ENST00000315274 ANKARQ7Z5J8 1434 aa13.14□□□□□ -0.31
MMP1-201ENST00000315274 NGDNQ8NEJ9 315 aaKnown RBP13.13□□□□□ -0.31
MMP1-201ENST00000315274 PHF8Q9UPP1 1060 aa13.13□□□□□ -0.31
MMP1-201ENST00000315274 C1orf167Q5SNV9 1468 aa13.13□□□□□ -0.31
MMP1-201ENST00000315274 MST1RQ04912 1400 aa13.13□□□□□ -0.31
MMP1-201ENST00000315274 MYOM1P52179 1685 aa13.13□□□□□ -0.31
MMP1-201ENST00000315274 TERF2IPQ9NYB0 399 aa13.12□□□□□ -0.31
MMP1-201ENST00000315274 ACEP12821 1306 aa13.12□□□□□ -0.31
MMP1-201ENST00000315274 PLEKHG3A1L390 1219 aa13.12□□□□□ -0.31
MMP1-201ENST00000315274 HDGFL2Q7Z4V5 671 aaPredicted RBP13.12□□□□□ -0.31
MMP1-201ENST00000315274 ITSN1Q15811 1721 aa13.12□□□□□ -0.31
MMP1-201ENST00000315274 NINLQ9Y2I6 1382 aa13.12□□□□□ -0.31
MMP1-201ENST00000315274 FOXO3O43524 673 aa13.11□□□□□ -0.31
MMP1-201ENST00000315274 TOM1O60784 492 aa13.11□□□□□ -0.31
MMP1-201ENST00000315274 TOPAZ1Q8N9V7 1692 aa13.1□□□□□ -0.31
MMP1-201ENST00000315274 UBAP1LF5GYI3 381 aa13.1□□□□□ -0.31
MMP1-201ENST00000315274 CNGB1Q14028 1251 aaPredicted RBP13.1□□□□□ -0.31
MMP1-201ENST00000315274 PIP4K2BP78356 416 aa13.09□□□□□ -0.31
MMP1-201ENST00000315274 PSME1Q06323 249 aa13.09□□□□□ -0.31
MMP1-201ENST00000315274 ZNF692Q9BU19 519 aaPredicted RBP13.09□□□□□ -0.31
MMP1-201ENST00000315274 A0A1W2PP64 1363 aa13.09□□□□□ -0.31
MMP1-201ENST00000315274 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
MMP1-201ENST00000315274 KTN1Q86UP2 1357 aaKnown RBP13.09□□□□□ -0.31
MMP1-201ENST00000315274 ANKRD36BQ8N2N9 1353 aa13.09□□□□□ -0.31
MMP1-201ENST00000315274 BRINP3Q76B58 766 aa13.09□□□□□ -0.31
MMP1-201ENST00000315274 CARD14Q9BXL6 1004 aa13.09□□□□□ -0.31
MMP1-201ENST00000315274 KNSTRNQ9Y448 316 aa13.09□□□□□ -0.31
MMP1-201ENST00000315274 XPCQ01831 940 aaPredicted RBP13.08□□□□□ -0.32
MMP1-201ENST00000315274 DDX17Q92841 729 aaKnown RBP13.08□□□□□ -0.32
MMP1-201ENST00000315274 CD163L1Q9NR16 1453 aa13.07□□□□□ -0.32
MMP1-201ENST00000315274 DIEXFQ68CQ4 756 aaKnown RBP13.07□□□□□ -0.32
MMP1-201ENST00000315274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.07□□□□□ -0.32
MMP1-201ENST00000315274 CPSF1Q10570 1443 aaKnown RBP13.07□□□□□ -0.32
MMP1-201ENST00000315274 POLR3AO14802 1390 aaPredicted RBP13.06□□□□□ -0.32
MMP1-201ENST00000315274 PER1O15534 1290 aaPredicted RBP13.06□□□□□ -0.32
MMP1-201ENST00000315274 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
MMP1-201ENST00000315274 IQSEC2Q5JU85 1478 aa13.06□□□□□ -0.32
MMP1-201ENST00000315274 NSD3Q9BZ95 1437 aa13.05□□□□□ -0.32
MMP1-201ENST00000315274 AKAP12Q02952 1782 aa13.05□□□□□ -0.32
MMP1-201ENST00000315274 KRT28Q7Z3Y7 464 aa13.05□□□□□ -0.32
MMP1-201ENST00000315274 KIF1AQ12756 1690 aa13.05□□□□□ -0.32
MMP1-201ENST00000315274 NPHP3Q7Z494 1330 aa13.04□□□□□ -0.32
MMP1-201ENST00000315274 USP6P35125 1406 aa13.04□□□□□ -0.32
MMP1-201ENST00000315274 CC2D1BQ5T0F9 858 aaKnown RBP13.03□□□□□ -0.32
MMP1-201ENST00000315274 POTEDQ86YR6 584 aa13.03□□□□□ -0.32
MMP1-201ENST00000315274 ROBO1Q9Y6N7 1651 aa13.03□□□□□ -0.32
MMP1-201ENST00000315274 CGNL1Q0VF96 1302 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms