RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 CFAP70Q5T0N1 1121 aa18.51■□□□□ 0.55
CKS2-201ENST00000314355 DCAF11Q8TEB1 546 aa18.51■□□□□ 0.55
CKS2-201ENST00000314355 POGKQ9P215 609 aa18.51■□□□□ 0.55
CKS2-201ENST00000314355 NPHP3Q7Z494 1330 aa18.5■□□□□ 0.55
CKS2-201ENST00000314355 PIK3C2GO75747 1445 aa18.5■□□□□ 0.55
CKS2-201ENST00000314355 NUTM2FA1L443 756 aa18.5■□□□□ 0.55
CKS2-201ENST00000314355 NALCNQ8IZF0 1738 aa18.49■□□□□ 0.55
CKS2-201ENST00000314355 YTHDC2Q9H6S0 1430 aaKnown RBP18.49■□□□□ 0.55
CKS2-201ENST00000314355 RXRBP28702 533 aa18.48■□□□□ 0.55
CKS2-201ENST00000314355 NGLY1Q96IV0 654 aa18.48■□□□□ 0.55
CKS2-201ENST00000314355 SETD1AO15047 1707 aaKnown RBP18.48■□□□□ 0.55
CKS2-201ENST00000314355 SOS2Q07890 1332 aaPredicted RBP18.48■□□□□ 0.55
CKS2-201ENST00000314355 SHPRHQ149N8 1683 aa18.47■□□□□ 0.55
CKS2-201ENST00000314355 C8orf37Q96NL8 207 aa18.47■□□□□ 0.55
CKS2-201ENST00000314355 TECPR2O15040 1411 aa18.47■□□□□ 0.55
CKS2-201ENST00000314355 FOXO3O43524 673 aa18.46■□□□□ 0.55
CKS2-201ENST00000314355 PNPLA6Q8IY17 1366 aa18.45■□□□□ 0.54
CKS2-201ENST00000314355 ADAMTS2O95450 1211 aa18.45■□□□□ 0.54
CKS2-201ENST00000314355 AFF2P51816 1311 aa18.45■□□□□ 0.54
CKS2-201ENST00000314355 MYOM2P54296 1465 aa18.45■□□□□ 0.54
CKS2-201ENST00000314355 PRAM1Q96QH2 718 aa18.44■□□□□ 0.54
CKS2-201ENST00000314355 LRP6O75581 1613 aa18.44■□□□□ 0.54
CKS2-201ENST00000314355 NHSL1Q5SYE7 1610 aa18.44■□□□□ 0.54
CKS2-201ENST00000314355 PSME1Q06323 249 aa18.43■□□□□ 0.54
CKS2-201ENST00000314355 SAFB2Q14151 953 aaKnown RBP eCLIP18.43■□□□□ 0.54
CKS2-201ENST00000314355 IFT172Q9UG01 1749 aa18.43■□□□□ 0.54
CKS2-201ENST00000314355 QTRT2Q9H974 415 aaKnown RBP18.42■□□□□ 0.54
CKS2-201ENST00000314355 PLEKHH1Q9ULM0 1364 aa18.42■□□□□ 0.54
CKS2-201ENST00000314355 TRAK1Q9UPV9 953 aa18.41■□□□□ 0.54
CKS2-201ENST00000314355 CDC42BPGQ6DT37 1551 aa18.41■□□□□ 0.54
CKS2-201ENST00000314355 NRXN1Q9ULB1 1477 aa18.39■□□□□ 0.54
CKS2-201ENST00000314355 LAMC1P11047 1609 aa18.39■□□□□ 0.53
CKS2-201ENST00000314355 HAP1P54257 671 aaPredicted RBP18.39■□□□□ 0.53
CKS2-201ENST00000314355 XPCQ01831 940 aaPredicted RBP18.39■□□□□ 0.53
CKS2-201ENST00000314355 KRT28Q7Z3Y7 464 aa18.39■□□□□ 0.53
CKS2-201ENST00000314355 PHF8Q9UPP1 1060 aa18.39■□□□□ 0.53
CKS2-201ENST00000314355 RBM6P78332 1123 aaKnown RBP18.38■□□□□ 0.53
CKS2-201ENST00000314355 USP21Q9UK80 565 aa18.37■□□□□ 0.53
CKS2-201ENST00000314355 KNDC1Q76NI1 1749 aa18.37■□□□□ 0.53
CKS2-201ENST00000314355 LMOD2Q6P5Q4 547 aa18.35■□□□□ 0.53
CKS2-201ENST00000314355 TRPC5Q9UL62 973 aaPredicted RBP18.35■□□□□ 0.53
CKS2-201ENST00000314355 EIF3AQ14152 1382 aaKnown RBP18.34■□□□□ 0.53
CKS2-201ENST00000314355 MINK1Q8N4C8 1332 aaPredicted RBP18.32■□□□□ 0.52
CKS2-201ENST00000314355 HIRIP3Q9BW71 556 aaPredicted RBP18.32■□□□□ 0.52
CKS2-201ENST00000314355 SPATA31A3Q5VYP0 1347 aa18.31■□□□□ 0.52
CKS2-201ENST00000314355 FNBP4Q8N3X1 1017 aaPredicted RBP18.31■□□□□ 0.52
CKS2-201ENST00000314355 PMFBP1Q8TBY8 1022 aa18.31■□□□□ 0.52
CKS2-201ENST00000314355 DLC1Q96QB1 1528 aa18.31■□□□□ 0.52
CKS2-201ENST00000314355 WASLO00401 505 aaPredicted RBP18.3■□□□□ 0.52
CKS2-201ENST00000314355 NGDNQ8NEJ9 315 aaKnown RBP18.29■□□□□ 0.52
CKS2-201ENST00000314355 GPRASP1Q5JY77 1395 aa18.29■□□□□ 0.52
CKS2-201ENST00000314355 PXDNQ92626 1479 aa18.28■□□□□ 0.52
CKS2-201ENST00000314355 CDK12Q9NYV4 1490 aaPredicted RBP18.28■□□□□ 0.52
CKS2-201ENST00000314355 ANKARQ7Z5J8 1434 aa18.28■□□□□ 0.52
CKS2-201ENST00000314355 FMN2Q9NZ56 1722 aa18.28■□□□□ 0.52
CKS2-201ENST00000314355 KIF1AQ12756 1690 aa18.28■□□□□ 0.52
CKS2-201ENST00000314355 PLEKHG5O94827 1062 aa18.27■□□□□ 0.52
CKS2-201ENST00000314355 UPF1Q92900 1129 aaKnown RBP eCLIP18.26■□□□□ 0.51
CKS2-201ENST00000314355 ARHGEF10O15013 1369 aa18.26■□□□□ 0.51
CKS2-201ENST00000314355 ADGRB1O14514 1584 aa18.25■□□□□ 0.51
CKS2-201ENST00000314355 PAK3O75914 559 aaPredicted RBP18.24■□□□□ 0.51
CKS2-201ENST00000314355 SBNO1A3KN83 1393 aa18.24■□□□□ 0.51
CKS2-201ENST00000314355 NEUROD1Q13562 356 aa18.23■□□□□ 0.51
CKS2-201ENST00000314355 UNC5CLQ8IV45 518 aa18.23■□□□□ 0.51
CKS2-201ENST00000314355 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
CKS2-201ENST00000314355 TNS3Q68CZ2 1445 aa18.23■□□□□ 0.51
CKS2-201ENST00000314355 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
CKS2-201ENST00000314355 CABLES1Q8TDN4 633 aa18.21■□□□□ 0.51
CKS2-201ENST00000314355 NUDT16Q96DE0 195 aaKnown RBP18.21■□□□□ 0.51
CKS2-201ENST00000314355 GJD4Q96KN9 370 aaPredicted RBP18.21■□□□□ 0.51
CKS2-201ENST00000314355 CCDC9Q9Y3X0 531 aaKnown RBP18.21■□□□□ 0.51
CKS2-201ENST00000314355 SRPK2P78362 688 aaKnown RBP18.18■□□□□ 0.5
CKS2-201ENST00000314355 NBPF1Q3BBV0 1214 aa18.18■□□□□ 0.5
CKS2-201ENST00000314355 L3MBTL2Q969R5 705 aa18.18■□□□□ 0.5
CKS2-201ENST00000314355 CCDC61Q9Y6R9 512 aa18.18■□□□□ 0.5
CKS2-201ENST00000314355 ATAD2Q6PL18 1390 aa18.17■□□□□ 0.5
CKS2-201ENST00000314355 ADGRB2O60241 1585 aa18.17■□□□□ 0.5
CKS2-201ENST00000314355 RGPD8O14715 1765 aaPredicted RBP18.17■□□□□ 0.5
CKS2-201ENST00000314355 ATRNO75882 1429 aa18.17■□□□□ 0.5
CKS2-201ENST00000314355 TULP4Q9NRJ4 1543 aa18.17■□□□□ 0.5
CKS2-201ENST00000314355 RGS12O14924 1447 aa18.16■□□□□ 0.5
CKS2-201ENST00000314355 SIN3AQ96ST3 1273 aa18.16■□□□□ 0.5
CKS2-201ENST00000314355 PRR36Q9H6K5 1346 aa18.16■□□□□ 0.5
CKS2-201ENST00000314355 CENPJQ9HC77 1338 aaPredicted RBP18.16■□□□□ 0.5
CKS2-201ENST00000314355 BCL9LQ86UU0 1499 aa18.15■□□□□ 0.5
CKS2-201ENST00000314355 VPS72Q15906 364 aa18.13■□□□□ 0.49
CKS2-201ENST00000314355 CCDC125Q86Z20 511 aa18.13■□□□□ 0.49
CKS2-201ENST00000314355 A0A0G2JS52 829 aa18.12■□□□□ 0.49
CKS2-201ENST00000314355 MYT1Q01538 1121 aa18.12■□□□□ 0.49
CKS2-201ENST00000314355 KIAA1210Q9ULL0 1709 aa18.12■□□□□ 0.49
CKS2-201ENST00000314355 FAM83GA6ND36 823 aa18.11■□□□□ 0.49
CKS2-201ENST00000314355 NBPF8Q3BBV2 869 aa18.11■□□□□ 0.49
CKS2-201ENST00000314355 ACEP12821 1306 aa18.11■□□□□ 0.49
CKS2-201ENST00000314355 MARF1Q9Y4F3 1742 aaKnown RBP18.11■□□□□ 0.49
CKS2-201ENST00000314355 SLIT2O94813 1529 aa18.1■□□□□ 0.49
CKS2-201ENST00000314355 PLEKHG3A1L390 1219 aa18.1■□□□□ 0.49
CKS2-201ENST00000314355 PRDM11Q9NQV5 511 aa18.1■□□□□ 0.49
CKS2-201ENST00000314355 BTG4Q9NY30 223 aa18.1■□□□□ 0.49
CKS2-201ENST00000314355 USP32Q8NFA0 1604 aa18.09■□□□□ 0.49
CKS2-201ENST00000314355 TRIM26Q12899 539 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms