RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 ARHGEF28Q8N1W1 1705 aaKnown RBP12.54□□□□□ -0.4
LSMEM1-201ENST00000312849 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
LSMEM1-201ENST00000312849 PDE3AQ14432 1141 aa12.54□□□□□ -0.4
LSMEM1-201ENST00000312849 GLI2P10070 1586 aa12.53□□□□□ -0.4
LSMEM1-201ENST00000312849 PPM1GO15355 546 aaPredicted RBP12.53□□□□□ -0.4
LSMEM1-201ENST00000312849 AAMPQ13685 434 aa12.53□□□□□ -0.4
LSMEM1-201ENST00000312849 NBR1Q14596 966 aa12.53□□□□□ -0.4
LSMEM1-201ENST00000312849 USP35Q9P2H5 1018 aa12.53□□□□□ -0.4
LSMEM1-201ENST00000312849 CGNL1Q0VF96 1302 aa12.53□□□□□ -0.4
LSMEM1-201ENST00000312849 ARHGAP31Q2M1Z3 1444 aa12.53□□□□□ -0.4
LSMEM1-201ENST00000312849 VGFO15240 615 aaPredicted RBP12.53□□□□□ -0.4
LSMEM1-201ENST00000312849 RUNDC1Q96C34 613 aa12.53□□□□□ -0.4
LSMEM1-201ENST00000312849 CFAP53Q96M91 514 aa12.53□□□□□ -0.4
LSMEM1-201ENST00000312849 FAM161AQ3B820 660 aa12.52□□□□□ -0.41
LSMEM1-201ENST00000312849 TRAK1Q9UPV9 953 aa12.52□□□□□ -0.41
LSMEM1-201ENST00000312849 VIRMAQ69YN4 1812 aaKnown RBP12.52□□□□□ -0.41
LSMEM1-201ENST00000312849 EVC2Q86UK5 1308 aa12.52□□□□□ -0.41
LSMEM1-201ENST00000312849 ZFYVE9O95405 1425 aa12.52□□□□□ -0.41
LSMEM1-201ENST00000312849 SIGLEC1Q9BZZ2 1709 aa12.52□□□□□ -0.41
LSMEM1-201ENST00000312849 NEXMIFQ5QGS0 1516 aa12.51□□□□□ -0.41
LSMEM1-201ENST00000312849 GGT6Q6P531 493 aa12.51□□□□□ -0.41
LSMEM1-201ENST00000312849 WDR63Q8IWG1 891 aa12.51□□□□□ -0.41
LSMEM1-201ENST00000312849 WWC1Q8IX03 1113 aa12.51□□□□□ -0.41
LSMEM1-201ENST00000312849 IQSEC2Q5JU85 1478 aa12.5□□□□□ -0.41
LSMEM1-201ENST00000312849 CCDC27Q2M243 656 aa12.5□□□□□ -0.41
LSMEM1-201ENST00000312849 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
LSMEM1-201ENST00000312849 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
LSMEM1-201ENST00000312849 DIP2CQ9Y2E4 1556 aa12.5□□□□□ -0.41
LSMEM1-201ENST00000312849 ANKRD36BQ8N2N9 1353 aa12.49□□□□□ -0.41
LSMEM1-201ENST00000312849 PHF23Q9BUL5 403 aaPredicted RBP12.48□□□□□ -0.41
LSMEM1-201ENST00000312849 SLC12A5Q9H2X9 1139 aa12.48□□□□□ -0.41
LSMEM1-201ENST00000312849 RICTORQ6R327 1708 aa12.48□□□□□ -0.41
LSMEM1-201ENST00000312849 TULP4Q9NRJ4 1543 aa12.47□□□□□ -0.41
LSMEM1-201ENST00000312849 BCAR3O75815 825 aa12.47□□□□□ -0.41
LSMEM1-201ENST00000312849 ANKRD26Q9UPS8 1709 aa12.46□□□□□ -0.41
LSMEM1-201ENST00000312849 SLC52A1Q9NWF4 448 aa12.46□□□□□ -0.41
LSMEM1-201ENST00000312849 MAPK8IP3Q9UPT6 1336 aa12.46□□□□□ -0.42
LSMEM1-201ENST00000312849 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.42
LSMEM1-201ENST00000312849 C8orf34Q49A92 452 aa12.46□□□□□ -0.42
LSMEM1-201ENST00000312849 TMEM132EQ6IEE7 984 aa12.46□□□□□ -0.42
LSMEM1-201ENST00000312849 ADGRB2O60241 1585 aa12.45□□□□□ -0.42
LSMEM1-201ENST00000312849 TCP11L2Q8N4U5 519 aa12.45□□□□□ -0.42
LSMEM1-201ENST00000312849 DAXXQ9UER7 740 aaPredicted RBP12.45□□□□□ -0.42
LSMEM1-201ENST00000312849 CLTCQ00610 1675 aaKnown RBP12.45□□□□□ -0.42
LSMEM1-201ENST00000312849 MTHFSP49914 203 aa12.44□□□□□ -0.42
LSMEM1-201ENST00000312849 CLUAP1Q96AJ1 413 aa12.44□□□□□ -0.42
LSMEM1-201ENST00000312849 MYH16Q9H6N6 1097 aa12.44□□□□□ -0.42
LSMEM1-201ENST00000312849 DMRT2Q9Y5R5 561 aa12.44□□□□□ -0.42
LSMEM1-201ENST00000312849 ZMYM3Q14202 1370 aa12.44□□□□□ -0.42
LSMEM1-201ENST00000312849 PREX1Q8TCU6 1659 aa12.44□□□□□ -0.42
LSMEM1-201ENST00000312849 CT47B1P0C2W7 299 aaPredicted RBP12.44□□□□□ -0.42
LSMEM1-201ENST00000312849 MYO5BQ9ULV0 1848 aa12.43□□□□□ -0.42
LSMEM1-201ENST00000312849 MED14O60244 1454 aa12.43□□□□□ -0.42
LSMEM1-201ENST00000312849 RARSP54136 660 aaKnown RBP12.43□□□□□ -0.42
LSMEM1-201ENST00000312849 SKAP1Q86WV1 359 aa12.43□□□□□ -0.42
LSMEM1-201ENST00000312849 PMFBP1Q8TBY8 1022 aa12.43□□□□□ -0.42
LSMEM1-201ENST00000312849 TMEM131LA2VDJ0 1609 aa12.43□□□□□ -0.42
LSMEM1-201ENST00000312849 NEFMP07197 916 aa12.42□□□□□ -0.42
LSMEM1-201ENST00000312849 ATAD2Q6PL18 1390 aa12.42□□□□□ -0.42
LSMEM1-201ENST00000312849 ABCC11Q96J66 1382 aa12.42□□□□□ -0.42
LSMEM1-201ENST00000312849 TNNT2P45379 298 aaPredicted RBP12.41□□□□□ -0.42
LSMEM1-201ENST00000312849 RGS3P49796 1198 aa12.4□□□□□ -0.42
LSMEM1-201ENST00000312849 LAS1LQ9Y4W2 734 aaKnown RBP12.4□□□□□ -0.42
LSMEM1-201ENST00000312849 IGHDP01880 384 aa12.4□□□□□ -0.42
LSMEM1-201ENST00000312849 IDI1Q13907 227 aa12.4□□□□□ -0.42
LSMEM1-201ENST00000312849 RAPGEF3O95398 923 aa12.39□□□□□ -0.43
LSMEM1-201ENST00000312849 PNNQ9H307 717 aaKnown RBP12.39□□□□□ -0.43
LSMEM1-201ENST00000312849 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
LSMEM1-201ENST00000312849 COG6Q9Y2V7 657 aa12.39□□□□□ -0.43
LSMEM1-201ENST00000312849 PTPRMP28827 1452 aa12.38□□□□□ -0.43
LSMEM1-201ENST00000312849 U2AF1L5P0DN76 240 aaPredicted RBP12.38□□□□□ -0.43
LSMEM1-201ENST00000312849 U2AF1Q01081 240 aaKnown RBP eCLIP12.38□□□□□ -0.43
LSMEM1-201ENST00000312849 NEUROD2Q15784 382 aa12.38□□□□□ -0.43
LSMEM1-201ENST00000312849 PANK1Q8TE04 598 aa12.38□□□□□ -0.43
LSMEM1-201ENST00000312849 RRP7AQ9Y3A4 280 aaKnown RBP12.38□□□□□ -0.43
LSMEM1-201ENST00000312849 KIF20BQ96Q89 1820 aa12.38□□□□□ -0.43
LSMEM1-201ENST00000312849 FRAT1Q92837 279 aaPredicted RBP12.38□□□□□ -0.43
LSMEM1-201ENST00000312849 CABP2Q9NPB3 220 aa12.38□□□□□ -0.43
LSMEM1-201ENST00000312849 IL16Q14005 1332 aa12.37□□□□□ -0.43
LSMEM1-201ENST00000312849 A0A1W2PP64 1363 aa12.37□□□□□ -0.43
LSMEM1-201ENST00000312849 RWDD1Q9H446 243 aaPredicted RBP12.37□□□□□ -0.43
LSMEM1-201ENST00000312849 COL3A1P02461 1466 aaPredicted RBP12.37□□□□□ -0.43
LSMEM1-201ENST00000312849 YTHDC2Q9H6S0 1430 aaKnown RBP12.36□□□□□ -0.43
LSMEM1-201ENST00000312849 SRPK2P78362 688 aaKnown RBP12.36□□□□□ -0.43
LSMEM1-201ENST00000312849 PPP6R1Q9UPN7 881 aa12.36□□□□□ -0.43
LSMEM1-201ENST00000312849 ZKSCAN2Q63HK3 967 aa12.35□□□□□ -0.43
LSMEM1-201ENST00000312849 REREQ9P2R6 1566 aa12.35□□□□□ -0.43
LSMEM1-201ENST00000312849 ALKQ9UM73 1620 aa12.35□□□□□ -0.43
LSMEM1-201ENST00000312849 DLC1Q96QB1 1528 aa12.34□□□□□ -0.43
LSMEM1-201ENST00000312849 HDGFL2Q7Z4V5 671 aaPredicted RBP12.34□□□□□ -0.43
LSMEM1-201ENST00000312849 YEATS2Q9ULM3 1422 aa12.34□□□□□ -0.43
LSMEM1-201ENST00000312849 CDC42BPGQ6DT37 1551 aa12.34□□□□□ -0.43
LSMEM1-201ENST00000312849 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
LSMEM1-201ENST00000312849 PLEKHF1Q96S99 279 aa12.34□□□□□ -0.43
LSMEM1-201ENST00000312849 POGKQ9P215 609 aa12.34□□□□□ -0.43
LSMEM1-201ENST00000312849 TMPOP42166 694 aaKnown RBP12.33□□□□□ -0.44
LSMEM1-201ENST00000312849 BECN1Q14457 450 aa12.33□□□□□ -0.44
LSMEM1-201ENST00000312849 MVPQ14764 893 aaKnown RBP12.33□□□□□ -0.44
LSMEM1-201ENST00000312849 CD163L1Q9NR16 1453 aa12.33□□□□□ -0.44
LSMEM1-201ENST00000312849 NFKBIBQ15653 356 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms