RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 SCAF1Q9H7N4 1312 aaKnown RBP24.91■■□□□ 1.58
SWSAP1-201ENST00000312423 ATF3P18847 181 aa24.91■■□□□ 1.58
SWSAP1-201ENST00000312423 SIRT1Q96EB6 747 aa24.91■■□□□ 1.58
SWSAP1-201ENST00000312423 FBXO41Q8TF61 875 aa24.9■■□□□ 1.58
SWSAP1-201ENST00000312423 PIP4K2BP78356 416 aa24.88■■□□□ 1.57
SWSAP1-201ENST00000312423 CADPS2Q86UW7 1296 aa24.87■■□□□ 1.57
SWSAP1-201ENST00000312423 CARD11Q9BXL7 1154 aa24.87■■□□□ 1.57
SWSAP1-201ENST00000312423 DCCP43146 1447 aa24.86■■□□□ 1.57
SWSAP1-201ENST00000312423 GPRASP1Q5JY77 1395 aa24.85■■□□□ 1.57
SWSAP1-201ENST00000312423 MINK1Q8N4C8 1332 aaPredicted RBP24.82■■□□□ 1.56
SWSAP1-201ENST00000312423 CDC42BPGQ6DT37 1551 aa24.82■■□□□ 1.56
SWSAP1-201ENST00000312423 EIF3AQ14152 1382 aaKnown RBP24.82■■□□□ 1.56
SWSAP1-201ENST00000312423 HIRIP3Q9BW71 556 aaPredicted RBP24.81■■□□□ 1.56
SWSAP1-201ENST00000312423 SLAIN2Q9P270 581 aa24.81■■□□□ 1.56
SWSAP1-201ENST00000312423 CENPJQ9HC77 1338 aaPredicted RBP24.79■■□□□ 1.56
SWSAP1-201ENST00000312423 QRICH2Q9H0J4 1663 aa24.79■■□□□ 1.56
SWSAP1-201ENST00000312423 MST1RQ04912 1400 aa24.77■■□□□ 1.56
SWSAP1-201ENST00000312423 ADGRB2O60241 1585 aa24.77■■□□□ 1.56
SWSAP1-201ENST00000312423 ROBO1Q9Y6N7 1651 aa24.76■■□□□ 1.55
SWSAP1-201ENST00000312423 NUTM2FA1L443 756 aa24.75■■□□□ 1.55
SWSAP1-201ENST00000312423 FMN2Q9NZ56 1722 aa24.75■■□□□ 1.55
SWSAP1-201ENST00000312423 ILDR1Q86SU0 546 aaPredicted RBP24.75■■□□□ 1.55
SWSAP1-201ENST00000312423 C1orf167Q5SNV9 1468 aa24.72■■□□□ 1.55
SWSAP1-201ENST00000312423 WASLO00401 505 aaPredicted RBP24.69■■□□□ 1.54
SWSAP1-201ENST00000312423 USP47Q96K76 1375 aa24.69■■□□□ 1.54
SWSAP1-201ENST00000312423 ESCO1Q5FWF5 840 aa24.67■■□□□ 1.54
SWSAP1-201ENST00000312423 BRINP3Q76B58 766 aa24.67■■□□□ 1.54
SWSAP1-201ENST00000312423 RGPD8O14715 1765 aaPredicted RBP24.66■■□□□ 1.54
SWSAP1-201ENST00000312423 ORAI2Q96SN7 254 aa24.66■■□□□ 1.54
SWSAP1-201ENST00000312423 CDK19Q9BWU1 502 aa24.66■■□□□ 1.54
SWSAP1-201ENST00000312423 TULP4Q9NRJ4 1543 aa24.65■■□□□ 1.54
SWSAP1-201ENST00000312423 ST20-MTHFSA0A0A6YYL1 179 aa24.64■■□□□ 1.53
SWSAP1-201ENST00000312423 SRPK2P78362 688 aaKnown RBP24.64■■□□□ 1.53
SWSAP1-201ENST00000312423 ANKARQ7Z5J8 1434 aa24.63■■□□□ 1.53
SWSAP1-201ENST00000312423 USP32Q8NFA0 1604 aa24.63■■□□□ 1.53
SWSAP1-201ENST00000312423 EVC2Q86UK5 1308 aa24.63■■□□□ 1.53
SWSAP1-201ENST00000312423 HSPA1LP34931 641 aa24.62■■□□□ 1.53
SWSAP1-201ENST00000312423 PHLPP1O60346 1717 aa24.61■■□□□ 1.53
SWSAP1-201ENST00000312423 SBNO2Q9Y2G9 1366 aa24.61■■□□□ 1.53
SWSAP1-201ENST00000312423 PRR36Q9H6K5 1346 aa24.6■■□□□ 1.53
SWSAP1-201ENST00000312423 CABP2Q9NPB3 220 aa24.59■■□□□ 1.53
SWSAP1-201ENST00000312423 ITSN1Q15811 1721 aa24.59■■□□□ 1.53
SWSAP1-201ENST00000312423 NUDT16Q96DE0 195 aaKnown RBP24.59■■□□□ 1.53
SWSAP1-201ENST00000312423 KIF1AQ12756 1690 aa24.58■■□□□ 1.53
SWSAP1-201ENST00000312423 ATP7BP35670 1465 aa24.58■■□□□ 1.53
SWSAP1-201ENST00000312423 NHSL1Q5SYE7 1610 aa24.58■■□□□ 1.52
SWSAP1-201ENST00000312423 AHDC1Q5TGY3 1603 aaPredicted RBP24.58■■□□□ 1.52
SWSAP1-201ENST00000312423 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
SWSAP1-201ENST00000312423 PHF8Q9UPP1 1060 aa24.57■■□□□ 1.52
SWSAP1-201ENST00000312423 EIF4G2P78344 907 aaKnown RBP eCLIP24.56■■□□□ 1.52
SWSAP1-201ENST00000312423 PMFBP1Q8TBY8 1022 aa24.55■■□□□ 1.52
SWSAP1-201ENST00000312423 TESK2Q96S53 571 aa24.55■■□□□ 1.52
SWSAP1-201ENST00000312423 FOXO3O43524 673 aa24.54■■□□□ 1.52
SWSAP1-201ENST00000312423 TOPAZ1Q8N9V7 1692 aa24.53■■□□□ 1.52
SWSAP1-201ENST00000312423 NPHP3Q7Z494 1330 aa24.53■■□□□ 1.52
SWSAP1-201ENST00000312423 SLC24A1O60721 1099 aa24.53■■□□□ 1.52
SWSAP1-201ENST00000312423 COL16A1Q07092 1604 aaPredicted RBP24.52■■□□□ 1.52
SWSAP1-201ENST00000312423 HSPA5P11021 654 aaKnown RBP24.52■■□□□ 1.52
SWSAP1-201ENST00000312423 CCDC61Q9Y6R9 512 aa24.52■■□□□ 1.52
SWSAP1-201ENST00000312423 XPCQ01831 940 aaPredicted RBP24.5■■□□□ 1.51
SWSAP1-201ENST00000312423 PPIP5K1Q6PFW1 1433 aa24.5■■□□□ 1.51
SWSAP1-201ENST00000312423 TMF1P82094 1093 aa24.5■■□□□ 1.51
SWSAP1-201ENST00000312423 NGDNQ8NEJ9 315 aaKnown RBP24.5■■□□□ 1.51
SWSAP1-201ENST00000312423 ATAD2Q6PL18 1390 aa24.49■■□□□ 1.51
SWSAP1-201ENST00000312423 ZEB1P37275 1124 aaPredicted RBP24.48■■□□□ 1.51
SWSAP1-201ENST00000312423 PSME1Q06323 249 aa24.47■■□□□ 1.51
SWSAP1-201ENST00000312423 DISP3Q9P2K9 1392 aa24.47■■□□□ 1.51
SWSAP1-201ENST00000312423 PXDNQ92626 1479 aa24.45■■□□□ 1.5
SWSAP1-201ENST00000312423 SOS2Q07890 1332 aaPredicted RBP24.45■■□□□ 1.5
SWSAP1-201ENST00000312423 KRT28Q7Z3Y7 464 aa24.45■■□□□ 1.5
SWSAP1-201ENST00000312423 CABP1Q9NZU7 370 aa24.45■■□□□ 1.5
SWSAP1-201ENST00000312423 ACEP12821 1306 aa24.44■■□□□ 1.5
SWSAP1-201ENST00000312423 LRRC59Q96AG4 307 aaKnown RBP24.43■■□□□ 1.5
SWSAP1-201ENST00000312423 PLEKHG3A1L390 1219 aa24.43■■□□□ 1.5
SWSAP1-201ENST00000312423 TMC1Q8TDI8 760 aa24.43■■□□□ 1.5
SWSAP1-201ENST00000312423 CDCA8Q53HL2 280 aa24.42■■□□□ 1.5
SWSAP1-201ENST00000312423 JCADQ9P266 1359 aa24.41■■□□□ 1.5
SWSAP1-201ENST00000312423 POLR3AO14802 1390 aaPredicted RBP24.4■■□□□ 1.5
SWSAP1-201ENST00000312423 PUS7Q96PZ0 661 aaKnown RBP24.4■■□□□ 1.5
SWSAP1-201ENST00000312423 POLR3GLQ9BT43 218 aa24.4■■□□□ 1.5
SWSAP1-201ENST00000312423 SHPRHQ149N8 1683 aa24.38■■□□□ 1.49
SWSAP1-201ENST00000312423 PAK3O75914 559 aaPredicted RBP24.37■■□□□ 1.49
SWSAP1-201ENST00000312423 LMOD2Q6P5Q4 547 aa24.37■■□□□ 1.49
SWSAP1-201ENST00000312423 TRPM3Q9HCF6 1732 aaPredicted RBP24.36■■□□□ 1.49
SWSAP1-201ENST00000312423 TNS3Q68CZ2 1445 aa24.36■■□□□ 1.49
SWSAP1-201ENST00000312423 SBNO1A3KN83 1393 aa24.35■■□□□ 1.49
SWSAP1-201ENST00000312423 SLC12A5Q9H2X9 1139 aa24.35■■□□□ 1.49
SWSAP1-201ENST00000312423 SPATA31A3Q5VYP0 1347 aa24.35■■□□□ 1.49
SWSAP1-201ENST00000312423 PNPLA6Q8IY17 1366 aa24.34■■□□□ 1.49
SWSAP1-201ENST00000312423 AKAP12Q02952 1782 aa24.34■■□□□ 1.49
SWSAP1-201ENST00000312423 NINLQ9Y2I6 1382 aa24.33■■□□□ 1.49
SWSAP1-201ENST00000312423 HDGFL2Q7Z4V5 671 aaPredicted RBP24.32■■□□□ 1.48
SWSAP1-201ENST00000312423 USP6P35125 1406 aa24.31■■□□□ 1.48
SWSAP1-201ENST00000312423 PLEKHG5O94827 1062 aa24.31■■□□□ 1.48
SWSAP1-201ENST00000312423 TERF2IPQ9NYB0 399 aa24.31■■□□□ 1.48
SWSAP1-201ENST00000312423 KTN1Q86UP2 1357 aaKnown RBP24.31■■□□□ 1.48
SWSAP1-201ENST00000312423 NUTM2BA6NNL0 878 aaPredicted RBP24.3■■□□□ 1.48
SWSAP1-201ENST00000312423 NUTM2EB1AL46 878 aaPredicted RBP24.3■■□□□ 1.48
SWSAP1-201ENST00000312423 NUTM2AQ8IVF1 878 aaPredicted RBP24.3■■□□□ 1.48
SWSAP1-201ENST00000312423 ZNF692Q9BU19 519 aaPredicted RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms