RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 TCP11L2Q8N4U5 519 aa32.88■■■□□ 2.85
HOXB3-201ENST00000311626 SBNO2Q9Y2G9 1366 aa32.87■■■□□ 2.85
HOXB3-201ENST00000311626 LMTK2Q8IWU2 1503 aa32.87■■■□□ 2.85
HOXB3-201ENST00000311626 FRMPD1Q5SYB0 1578 aa32.87■■■□□ 2.85
HOXB3-201ENST00000311626 FAM161AQ3B820 660 aa32.87■■■□□ 2.85
HOXB3-201ENST00000311626 CABP2Q9NPB3 220 aa32.87■■■□□ 2.85
HOXB3-201ENST00000311626 BCL2L13Q9BXK5 485 aa32.86■■■□□ 2.85
HOXB3-201ENST00000311626 TNNQ9UQP3 1299 aa32.86■■■□□ 2.85
HOXB3-201ENST00000311626 POGZQ7Z3K3 1410 aa32.85■■■□□ 2.85
HOXB3-201ENST00000311626 STK26Q9P289 416 aa32.85■■■□□ 2.85
HOXB3-201ENST00000311626 MYO3AQ8NEV4 1616 aa32.84■■■□□ 2.85
HOXB3-201ENST00000311626 QRICH2Q9H0J4 1663 aa32.84■■■□□ 2.85
HOXB3-201ENST00000311626 RUNDC1Q96C34 613 aa32.83■■■□□ 2.85
HOXB3-201ENST00000311626 ADGRB1O14514 1584 aa32.82■■■□□ 2.84
HOXB3-201ENST00000311626 PPLO60437 1756 aa32.81■■■□□ 2.84
HOXB3-201ENST00000311626 DDRGK1Q96HY6 314 aa32.8■■■□□ 2.84
HOXB3-201ENST00000311626 SETBP1Q9Y6X0 1596 aa32.79■■■□□ 2.84
HOXB3-201ENST00000311626 CGNL1Q0VF96 1302 aa32.78■■■□□ 2.84
HOXB3-201ENST00000311626 SHPRHQ149N8 1683 aa32.77■■■□□ 2.84
HOXB3-201ENST00000311626 ABCC3O15438 1527 aa32.75■■■□□ 2.83
HOXB3-201ENST00000311626 U2AF1L5P0DN76 240 aaPredicted RBP32.75■■■□□ 2.83
HOXB3-201ENST00000311626 U2AF1Q01081 240 aaKnown RBP eCLIP32.75■■■□□ 2.834e-6■■■■□ 20.8
HOXB3-201ENST00000311626 CLUAP1Q96AJ1 413 aa32.75■■■□□ 2.83
HOXB3-201ENST00000311626 RARSP54136 660 aaKnown RBP32.74■■■□□ 2.83
HOXB3-201ENST00000311626 RLBP1P12271 317 aa32.74■■■□□ 2.83
HOXB3-201ENST00000311626 IDI1Q13907 227 aa32.74■■■□□ 2.83
HOXB3-201ENST00000311626 OSCARQ8IYS5 282 aa32.74■■■□□ 2.83
HOXB3-201ENST00000311626 MLH3Q9UHC1 1453 aa32.74■■■□□ 2.83
HOXB3-201ENST00000311626 EVC2Q86UK5 1308 aa32.73■■■□□ 2.83
HOXB3-201ENST00000311626 ZC3H13Q5T200 1668 aaKnown RBP32.72■■■□□ 2.83
HOXB3-201ENST00000311626 PDE3AQ14432 1141 aa32.72■■■□□ 2.83
HOXB3-201ENST00000311626 RPGRIP1LQ68CZ1 1315 aa32.72■■■□□ 2.83
HOXB3-201ENST00000311626 NGEFQ8N5V2 710 aa32.72■■■□□ 2.83
HOXB3-201ENST00000311626 DAXXQ9UER7 740 aaPredicted RBP32.71■■■□□ 2.83
HOXB3-201ENST00000311626 SIGLEC1Q9BZZ2 1709 aa32.71■■■□□ 2.83
HOXB3-201ENST00000311626 HECW2Q9P2P5 1572 aa32.71■■■□□ 2.83
HOXB3-201ENST00000311626 VGFO15240 615 aaPredicted RBP32.71■■■□□ 2.83
HOXB3-201ENST00000311626 CFAP53Q96M91 514 aa32.71■■■□□ 2.83
HOXB3-201ENST00000311626 PPM1GO15355 546 aaPredicted RBP32.69■■■□□ 2.82
HOXB3-201ENST00000311626 GGNBP2Q9H3C7 697 aa32.69■■■□□ 2.82
HOXB3-201ENST00000311626 SRPK2P78362 688 aaKnown RBP32.68■■■□□ 2.82
HOXB3-201ENST00000311626 GLI2P10070 1586 aa32.67■■■□□ 2.82
HOXB3-201ENST00000311626 TULP4Q9NRJ4 1543 aa32.67■■■□□ 2.82
HOXB3-201ENST00000311626 U2SURPO15042 1029 aaKnown RBP32.65■■■□□ 2.82
HOXB3-201ENST00000311626 SEC24BO95487 1268 aa32.65■■■□□ 2.82
HOXB3-201ENST00000311626 MINK1Q8N4C8 1332 aaPredicted RBP32.65■■■□□ 2.82
HOXB3-201ENST00000311626 PCDHB15Q9Y5E8 787 aa32.64■■■□□ 2.82
HOXB3-201ENST00000311626 PHF23Q9BUL5 403 aaPredicted RBP32.64■■■□□ 2.82
HOXB3-201ENST00000311626 IQSEC2Q5JU85 1478 aa32.64■■■□□ 2.82
HOXB3-201ENST00000311626 TSR2Q969E8 191 aaKnown RBP32.64■■■□□ 2.81
HOXB3-201ENST00000311626 CAMSAP1Q5T5Y3 1602 aa32.62■■■□□ 2.81
HOXB3-201ENST00000311626 ANKRD36BQ8N2N9 1353 aa32.62■■■□□ 2.81
HOXB3-201ENST00000311626 WDR63Q8IWG1 891 aa32.62■■■□□ 2.81
HOXB3-201ENST00000311626 NFKBIBQ15653 356 aa32.6■■■□□ 2.81
HOXB3-201ENST00000311626 NEXMIFQ5QGS0 1516 aa32.59■■■□□ 2.81
HOXB3-201ENST00000311626 A0A1W2PP64 1363 aa32.58■■■□□ 2.81
HOXB3-201ENST00000311626 ARHGEF28Q8N1W1 1705 aaKnown RBP32.57■■■□□ 2.8
HOXB3-201ENST00000311626 FBXO31Q5XUX0 539 aaPredicted RBP32.56■■■□□ 2.8
HOXB3-201ENST00000311626 USP35Q9P2H5 1018 aa32.56■■■□□ 2.8
HOXB3-201ENST00000311626 PRAM1Q96QH2 718 aa32.56■■■□□ 2.8
HOXB3-201ENST00000311626 CFAP74Q9C0B2 1584 aa32.56■■■□□ 2.8
HOXB3-201ENST00000311626 YEATS2Q9ULM3 1422 aa32.55■■■□□ 2.8
HOXB3-201ENST00000311626 USP19O94966 1318 aa32.53■■■□□ 2.8
HOXB3-201ENST00000311626 POGKQ9P215 609 aa32.53■■■□□ 2.8
HOXB3-201ENST00000311626 FBLN1P23142 703 aa32.51■■■□□ 2.8
HOXB3-201ENST00000311626 MYH16Q9H6N6 1097 aa32.51■■■□□ 2.8
HOXB3-201ENST00000311626 NINLQ9Y2I6 1382 aa32.51■■■□□ 2.79
HOXB3-201ENST00000311626 CCDC27Q2M243 656 aa32.51■■■□□ 2.79
HOXB3-201ENST00000311626 DIP2CQ9Y2E4 1556 aa32.5■■■□□ 2.79
HOXB3-201ENST00000311626 EXOSC9Q06265 439 aaKnown RBP32.49■■■□□ 2.79
HOXB3-201ENST00000311626 PDZRN3Q9UPQ7 1066 aa32.49■■■□□ 2.79
HOXB3-201ENST00000311626 PIK3C2BO00750 1634 aa32.48■■■□□ 2.79
HOXB3-201ENST00000311626 FYB1O15117 783 aa32.48■■■□□ 2.79
HOXB3-201ENST00000311626 USP32Q8NFA0 1604 aa32.48■■■□□ 2.79
HOXB3-201ENST00000311626 PMFBP1Q8TBY8 1022 aa32.46■■■□□ 2.79
HOXB3-201ENST00000311626 MYO5BQ9ULV0 1848 aa32.46■■■□□ 2.79
HOXB3-201ENST00000311626 TMPOP42166 694 aaKnown RBP32.46■■■□□ 2.79
HOXB3-201ENST00000311626 PUS7Q96PZ0 661 aaKnown RBP32.46■■■□□ 2.79
HOXB3-201ENST00000311626 PLEKHF1Q96S99 279 aa32.46■■■□□ 2.79
HOXB3-201ENST00000311626 MAPK8IP3Q9UPT6 1336 aa32.46■■■□□ 2.79
HOXB3-201ENST00000311626 TRIM35Q9UPQ4 493 aa32.45■■■□□ 2.79
HOXB3-201ENST00000311626 NSD2O96028 1365 aa32.44■■■□□ 2.78
HOXB3-201ENST00000311626 SLC52A1Q9NWF4 448 aa32.44■■■□□ 2.78
HOXB3-201ENST00000311626 FTSJ3Q8IY81 847 aaKnown RBP32.44■■■□□ 2.78
HOXB3-201ENST00000311626 SMC4Q9NTJ3 1288 aa32.44■■■□□ 2.78
HOXB3-201ENST00000311626 ABCC11Q96J66 1382 aa32.43■■■□□ 2.78
HOXB3-201ENST00000311626 FRAT2O75474 233 aaPredicted RBP32.43■■■□□ 2.78
HOXB3-201ENST00000311626 IL27Q8NEV9 243 aa32.43■■■□□ 2.78
HOXB3-201ENST00000311626 NEO1Q92859 1461 aa32.41■■■□□ 2.78
HOXB3-201ENST00000311626 MVPQ14764 893 aaKnown RBP32.41■■■□□ 2.78
HOXB3-201ENST00000311626 ZKSCAN2Q63HK3 967 aa32.41■■■□□ 2.78
HOXB3-201ENST00000311626 CABP1Q9NZU7 370 aa32.41■■■□□ 2.78
HOXB3-201ENST00000311626 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.4■■■□□ 2.78
HOXB3-201ENST00000311626 DZIP1LQ8IYY4 767 aaKnown RBP32.4■■■□□ 2.78
HOXB3-201ENST00000311626 CDK19Q9BWU1 502 aa32.4■■■□□ 2.78
HOXB3-201ENST00000311626 STAG3Q9UJ98 1225 aa32.4■■■□□ 2.78
HOXB3-201ENST00000311626 SSH1Q8WYL5 1049 aa32.39■■■□□ 2.78
HOXB3-201ENST00000311626 TERF2IPQ9NYB0 399 aa32.39■■■□□ 2.78
HOXB3-201ENST00000311626 RIPK4P57078 832 aa32.38■■■□□ 2.77
HOXB3-201ENST00000311626 RWDD1Q9H446 243 aaPredicted RBP32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms