RNA–Protein interactions for RNA: ENST00000311180.8

PDE12-201, Transcript of phosphodiesterase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE12, Length 8,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE12-201ENST00000311180 FOXD4L3Q6VB84 417 aaPredicted RBP14.57□□□□□ -0.08
PDE12-201ENST00000311180 SPATA24Q86W54 205 aa14.57□□□□□ -0.08
PDE12-201ENST00000311180 PDILTQ8N807 584 aa14.57□□□□□ -0.08
PDE12-201ENST00000311180 RALYLQ86SE5 291 aaKnown RBP14.57□□□□□ -0.08
PDE12-201ENST00000311180 IFIT2P09913 472 aaKnown RBP14.56□□□□□ -0.08
PDE12-201ENST00000311180 ZNF396Q96N95 335 aaPredicted RBP14.56□□□□□ -0.08
PDE12-201ENST00000311180 CBFA2T2O43439 604 aa14.56□□□□□ -0.08
PDE12-201ENST00000311180 FEZ1Q99689 392 aa14.56□□□□□ -0.08
PDE12-201ENST00000311180 CCDC18Q5T9S5 1454 aa14.56□□□□□ -0.08
PDE12-201ENST00000311180 POLR3GO15318 223 aaPredicted RBP14.56□□□□□ -0.08
PDE12-201ENST00000311180 STIM1Q13586 685 aa14.56□□□□□ -0.08
PDE12-201ENST00000311180 LUZP1Q86V48 1076 aa14.56□□□□□ -0.08
PDE12-201ENST00000311180 HIP1O00291 1037 aa14.56□□□□□ -0.08
PDE12-201ENST00000311180 TRIM34Q9BYJ4 488 aa14.56□□□□□ -0.08
PDE12-201ENST00000311180 NACADO15069 1562 aa14.55□□□□□ -0.08
PDE12-201ENST00000311180 SYCP1Q15431 976 aa14.55□□□□□ -0.08
PDE12-201ENST00000311180 C9orf78Q9NZ63 289 aaPredicted RBP14.55□□□□□ -0.08
PDE12-201ENST00000311180 SHTN1A0MZ66 631 aa14.55□□□□□ -0.08
PDE12-201ENST00000311180 KRI1Q8N9T8 703 aaKnown RBP14.55□□□□□ -0.08
PDE12-201ENST00000311180 RSPH4AQ5TD94 716 aa14.55□□□□□ -0.08
PDE12-201ENST00000311180 MICALCLQ6ZW33 695 aa14.55□□□□□ -0.08
PDE12-201ENST00000311180 NUP155O75694 1391 aa14.55□□□□□ -0.08
PDE12-201ENST00000311180 DZIP1LQ8IYY4 767 aaKnown RBP14.54□□□□□ -0.08
PDE12-201ENST00000311180 SENP3Q9H4L4 574 aaPredicted RBP14.54□□□□□ -0.08
PDE12-201ENST00000311180 SMC2O95347 1197 aa14.54□□□□□ -0.08
PDE12-201ENST00000311180 MPHOSPH9Q99550 1183 aa14.54□□□□□ -0.08
PDE12-201ENST00000311180 UQCRHLA0A096LP55 91 aa14.54□□□□□ -0.08
PDE12-201ENST00000311180 UQCRHP07919 91 aa14.54□□□□□ -0.08
PDE12-201ENST00000311180 ZNF330Q9Y3S2 320 aaPredicted RBP14.54□□□□□ -0.08
PDE12-201ENST00000311180 SOX12O15370 315 aa14.54□□□□□ -0.08
PDE12-201ENST00000311180 CCDC146Q8IYE0 955 aa14.54□□□□□ -0.08
PDE12-201ENST00000311180 CDC45O75419 566 aa14.53□□□□□ -0.08
PDE12-201ENST00000311180 CCDC181Q5TID7 509 aa14.53□□□□□ -0.08
PDE12-201ENST00000311180 NFXL1Q6ZNB6 911 aa14.53□□□□□ -0.08
PDE12-201ENST00000311180 DDX58O95786 925 aaKnown RBP14.53□□□□□ -0.08
PDE12-201ENST00000311180 SART3Q15020 963 aaKnown RBP14.53□□□□□ -0.08
PDE12-201ENST00000311180 CCDC91Q7Z6B0 441 aa14.53□□□□□ -0.08
PDE12-201ENST00000311180 ZFYVE27Q5T4F4 411 aa14.53□□□□□ -0.08
PDE12-201ENST00000311180 EIF4G1Q04637 1599 aaKnown RBP14.53□□□□□ -0.08
PDE12-201ENST00000311180 CSB-PGBD3P0DP91 1061 aa14.53□□□□□ -0.08
PDE12-201ENST00000311180 PPFIBP1Q86W92 1011 aa14.52□□□□□ -0.08
PDE12-201ENST00000311180 GTF2E1P29083 439 aaPredicted RBP14.52□□□□□ -0.08
PDE12-201ENST00000311180 PDCL3Q9H2J4 239 aa14.52□□□□□ -0.08
PDE12-201ENST00000311180 ESPNB1AK53 854 aa14.52□□□□□ -0.09
PDE12-201ENST00000311180 CIZ1Q9ULV3 898 aaPredicted RBP14.52□□□□□ -0.09
PDE12-201ENST00000311180 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.51□□□□□ -0.09
PDE12-201ENST00000311180 NF2P35240 595 aa14.51□□□□□ -0.09
PDE12-201ENST00000311180 ANKRD1Q15327 319 aa14.51□□□□□ -0.09
PDE12-201ENST00000311180 CRBNQ96SW2 442 aa14.51□□□□□ -0.09
PDE12-201ENST00000311180 CTDP1Q9Y5B0 961 aaPredicted RBP14.51□□□□□ -0.09
PDE12-201ENST00000311180 KIF3BO15066 747 aa14.51□□□□□ -0.09
PDE12-201ENST00000311180 SLC4A3P48751 1232 aa14.51□□□□□ -0.09
PDE12-201ENST00000311180 CNKSR2Q8WXI2 1034 aa14.51□□□□□ -0.09
PDE12-201ENST00000311180 CRACR2AQ9BSW2 395 aa14.51□□□□□ -0.09
PDE12-201ENST00000311180 PPM1EQ8WY54 764 aa14.51□□□□□ -0.09
PDE12-201ENST00000311180 AEBP1Q8IUX7 1158 aa14.5□□□□□ -0.09
PDE12-201ENST00000311180 RBM33Q96EV2 1170 aaKnown RBP14.5□□□□□ -0.09
PDE12-201ENST00000311180 CARMIL2Q6F5E8 1435 aa14.49□□□□□ -0.09
PDE12-201ENST00000311180 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
PDE12-201ENST00000311180 AMPHP49418 695 aa14.49□□□□□ -0.09
PDE12-201ENST00000311180 G3BP1Q13283 466 aaKnown RBP eCLIP14.49□□□□□ -0.09
PDE12-201ENST00000311180 CCDC144AA2RUR9 1427 aa14.49□□□□□ -0.09
PDE12-201ENST00000311180 CCAR1Q8IX12 1150 aaKnown RBP14.49□□□□□ -0.09
PDE12-201ENST00000311180 ZSCAN30Q86W11 494 aa14.49□□□□□ -0.09
PDE12-201ENST00000311180 UBXN4Q92575 508 aa14.49□□□□□ -0.09
PDE12-201ENST00000311180 PRKRIP1Q9H875 184 aaPredicted RBP14.49□□□□□ -0.09
PDE12-201ENST00000311180 WDR33Q9C0J8 1336 aaKnown RBP14.48□□□□□ -0.09
PDE12-201ENST00000311180 TTLL5Q6EMB2 1281 aa14.48□□□□□ -0.09
PDE12-201ENST00000311180 TMCO3Q6UWJ1 677 aa14.48□□□□□ -0.09
PDE12-201ENST00000311180 DESP17661 470 aa14.48□□□□□ -0.09
PDE12-201ENST00000311180 GRPEL1Q9HAV7 217 aa14.48□□□□□ -0.09
PDE12-201ENST00000311180 CNTROBQ8N137 903 aa14.48□□□□□ -0.09
PDE12-201ENST00000311180 STAMBPO95630 424 aa14.47□□□□□ -0.09
PDE12-201ENST00000311180 IMMTQ16891 758 aaKnown RBP14.47□□□□□ -0.09
PDE12-201ENST00000311180 MEX3CQ5U5Q3 659 aaKnown RBP14.47□□□□□ -0.09
PDE12-201ENST00000311180 EXOC6Q8TAG9 804 aa14.47□□□□□ -0.09
PDE12-201ENST00000311180 VPS37DQ86XT2 251 aa14.46□□□□□ -0.09
PDE12-201ENST00000311180 CGNQ9P2M7 1197 aaKnown RBP14.46□□□□□ -0.09
PDE12-201ENST00000311180 CFAP45Q9UL16 551 aa14.46□□□□□ -0.09
PDE12-201ENST00000311180 SERPINC1P01008 464 aa14.46□□□□□ -0.09
PDE12-201ENST00000311180 C1orf141Q5JVX7 400 aa14.46□□□□□ -0.09
PDE12-201ENST00000311180 PRKCSHP14314 528 aaPredicted RBP14.46□□□□□ -0.1
PDE12-201ENST00000311180 FBXO3Q9UK99 471 aa14.46□□□□□ -0.1
PDE12-201ENST00000311180 MCM5P33992 734 aa14.46□□□□□ -0.1
PDE12-201ENST00000311180 RNF214Q8ND24 703 aa14.46□□□□□ -0.1
PDE12-201ENST00000311180 COG6Q9Y2V7 657 aa14.46□□□□□ -0.1
PDE12-201ENST00000311180 POTEB2H3BUK9 544 aa14.45□□□□□ -0.1
PDE12-201ENST00000311180 SAFB2Q14151 953 aaKnown RBP eCLIP14.45□□□□□ -0.1
PDE12-201ENST00000311180 CCDC148Q8NFR7 591 aa14.45□□□□□ -0.1
PDE12-201ENST00000311180 KIF18AQ8NI77 898 aa14.45□□□□□ -0.1
PDE12-201ENST00000311180 USP47Q96K76 1375 aa14.45□□□□□ -0.1
PDE12-201ENST00000311180 CCDC102AQ96A19 550 aa14.45□□□□□ -0.1
PDE12-201ENST00000311180 CARMIL1Q5VZK9 1371 aa14.44□□□□□ -0.1
PDE12-201ENST00000311180 KRT85P78386 507 aa14.44□□□□□ -0.1
PDE12-201ENST00000311180 EVC2Q86UK5 1308 aa14.44□□□□□ -0.1
PDE12-201ENST00000311180 CDK5RAP3Q96JB5 506 aa14.44□□□□□ -0.1
PDE12-201ENST00000311180 TNMDQ9H2S6 317 aa14.44□□□□□ -0.1
PDE12-201ENST00000311180 CENPHQ9H3R5 247 aa14.44□□□□□ -0.1
PDE12-201ENST00000311180 ZSCAN12O43309 604 aa14.44□□□□□ -0.1
PDE12-201ENST00000311180 CFAP57Q96MR6 1250 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms