RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 RRP1P56182 461 aaKnown RBP30.39■■■□□ 2.45
CTSF-201ENST00000310325 POLR3AO14802 1390 aaPredicted RBP30.38■■■□□ 2.45
CTSF-201ENST00000310325 SAFB2Q14151 953 aaKnown RBP eCLIP30.37■■■□□ 2.45
CTSF-201ENST00000310325 MORC1Q86VD1 984 aa30.36■■■□□ 2.45
CTSF-201ENST00000310325 PLEKHH1Q9ULM0 1364 aa30.36■■■□□ 2.45
CTSF-201ENST00000310325 NINLQ9Y2I6 1382 aa30.36■■■□□ 2.45
CTSF-201ENST00000310325 RIMS2Q9UQ26 1411 aa30.36■■■□□ 2.45
CTSF-201ENST00000310325 CABP2Q9NPB3 220 aa30.35■■■□□ 2.45
CTSF-201ENST00000310325 CGNL1Q0VF96 1302 aa30.35■■■□□ 2.45
CTSF-201ENST00000310325 SETD1AO15047 1707 aaKnown RBP30.35■■■□□ 2.45
CTSF-201ENST00000310325 ESF1Q9H501 851 aaKnown RBP30.33■■■□□ 2.45
CTSF-201ENST00000310325 PRAM1Q96QH2 718 aa30.32■■■□□ 2.44
CTSF-201ENST00000310325 NSD2O96028 1365 aa30.32■■■□□ 2.44
CTSF-201ENST00000310325 ZMYM3Q14202 1370 aa30.32■■■□□ 2.44
CTSF-201ENST00000310325 ZNF521Q96K83 1311 aa30.32■■■□□ 2.44
CTSF-201ENST00000310325 SHPRHQ149N8 1683 aa30.31■■■□□ 2.44
CTSF-201ENST00000310325 POGKQ9P215 609 aa30.3■■■□□ 2.44
CTSF-201ENST00000310325 DLC1Q96QB1 1528 aa30.3■■■□□ 2.44
CTSF-201ENST00000310325 ATAD2Q6PL18 1390 aa30.3■■■□□ 2.44
CTSF-201ENST00000310325 SRPK2P78362 688 aaKnown RBP30.29■■■□□ 2.44
CTSF-201ENST00000310325 MINK1Q8N4C8 1332 aaPredicted RBP30.28■■■□□ 2.44
CTSF-201ENST00000310325 CCDC146Q8IYE0 955 aa30.27■■■□□ 2.44
CTSF-201ENST00000310325 A0A1W2PP64 1363 aa30.25■■■□□ 2.43
CTSF-201ENST00000310325 NRXN3Q9Y4C0 1643 aa30.25■■■□□ 2.43
CTSF-201ENST00000310325 CCDC136Q96JN2 1154 aa30.25■■■□□ 2.43
CTSF-201ENST00000310325 RBM19Q9Y4C8 960 aaKnown RBP30.24■■■□□ 2.43
CTSF-201ENST00000310325 ABCC11Q96J66 1382 aa30.24■■■□□ 2.43
CTSF-201ENST00000310325 GOLGA2Q08379 1002 aa30.23■■■□□ 2.43
CTSF-201ENST00000310325 TNNT2P45379 298 aaPredicted RBP30.23■■■□□ 2.43
CTSF-201ENST00000310325 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.22■■■□□ 2.43
CTSF-201ENST00000310325 APAF1O14727 1248 aa30.21■■■□□ 2.43
CTSF-201ENST00000310325 DUSP27Q5VZP5 1158 aa30.21■■■□□ 2.43
CTSF-201ENST00000310325 NGEFQ8N5V2 710 aa30.21■■■□□ 2.43
CTSF-201ENST00000310325 ANKRD26Q9UPS8 1709 aa30.2■■■□□ 2.43
CTSF-201ENST00000310325 TNRQ92752 1358 aa30.2■■■□□ 2.43
CTSF-201ENST00000310325 CD163L1Q9NR16 1453 aa30.18■■■□□ 2.42
CTSF-201ENST00000310325 TERF2IPQ9NYB0 399 aa30.17■■■□□ 2.42
CTSF-201ENST00000310325 UBR1Q8IWV7 1749 aa30.16■■■□□ 2.42
CTSF-201ENST00000310325 SLFN5Q08AF3 891 aa30.16■■■□□ 2.42
CTSF-201ENST00000310325 EXOC6Q8TAG9 804 aa30.16■■■□□ 2.42
CTSF-201ENST00000310325 CDK19Q9BWU1 502 aa30.16■■■□□ 2.42
CTSF-201ENST00000310325 MTHFSP49914 203 aa30.15■■■□□ 2.42
CTSF-201ENST00000310325 CFAP53Q96M91 514 aa30.15■■■□□ 2.42
CTSF-201ENST00000310325 MED14O60244 1454 aa30.13■■■□□ 2.41
CTSF-201ENST00000310325 KNDC1Q76NI1 1749 aa30.13■■■□□ 2.41
CTSF-201ENST00000310325 TRMT2AQ8IZ69 625 aaKnown RBP30.12■■■□□ 2.41
CTSF-201ENST00000310325 HDGFP51858 240 aaKnown RBP30.12■■■□□ 2.41
CTSF-201ENST00000310325 KIF20BQ96Q89 1820 aa30.1■■■□□ 2.41
CTSF-201ENST00000310325 WAPLQ7Z5K2 1190 aa30.1■■■□□ 2.41
CTSF-201ENST00000310325 HDGFL2Q7Z4V5 671 aaPredicted RBP30.09■■■□□ 2.41
CTSF-201ENST00000310325 DNAJC5Q9H3Z4 198 aa30.09■■■□□ 2.41
CTSF-201ENST00000310325 IQSEC2Q5JU85 1478 aa30.09■■■□□ 2.41
CTSF-201ENST00000310325 NLRP1Q9C000 1473 aa30.09■■■□□ 2.41
CTSF-201ENST00000310325 METP08581 1390 aa30.09■■■□□ 2.41
CTSF-201ENST00000310325 PLIN1O60240 522 aa30.08■■■□□ 2.41
CTSF-201ENST00000310325 RUNDC1Q96C34 613 aa30.07■■■□□ 2.4
CTSF-201ENST00000310325 E9PSI1 815 aa30.06■■■□□ 2.4
CTSF-201ENST00000310325 NKTRP30414 1462 aaKnown RBP30.06■■■□□ 2.4
CTSF-201ENST00000310325 TMEM2Q9UHN6 1383 aa30.06■■■□□ 2.4
CTSF-201ENST00000310325 GGNBP2Q9H3C7 697 aa30.06■■■□□ 2.4
CTSF-201ENST00000310325 ATP7BP35670 1465 aa30.05■■■□□ 2.4
CTSF-201ENST00000310325 SPINK5Q9NQ38 1064 aaPredicted RBP30.05■■■□□ 2.4
CTSF-201ENST00000310325 CABP1Q9NZU7 370 aa30.05■■■□□ 2.4
CTSF-201ENST00000310325 FYB1O15117 783 aa30.04■■■□□ 2.4
CTSF-201ENST00000310325 TECPR2O15040 1411 aa30.04■■■□□ 2.4
CTSF-201ENST00000310325 CPS1P31327 1500 aa30.04■■■□□ 2.4
CTSF-201ENST00000310325 FAM135BQ49AJ0 1406 aa30.02■■■□□ 2.4
CTSF-201ENST00000310325 WWC1Q8IX03 1113 aa30.01■■■□□ 2.39
CTSF-201ENST00000310325 SIRT1Q96EB6 747 aa30■■■□□ 2.39
CTSF-201ENST00000310325 CRBNQ96SW2 442 aa29.99■■■□□ 2.39
CTSF-201ENST00000310325 COL3A1P02461 1466 aaPredicted RBP29.99■■■□□ 2.39
CTSF-201ENST00000310325 TCP11L2Q8N4U5 519 aa29.98■■■□□ 2.39
CTSF-201ENST00000310325 DMRT2Q9Y5R5 561 aa29.98■■■□□ 2.39
CTSF-201ENST00000310325 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.97■■■□□ 2.39
CTSF-201ENST00000310325 C3P01024 1663 aa29.97■■■□□ 2.39
CTSF-201ENST00000310325 ADGRB2O60241 1585 aa29.97■■■□□ 2.39
CTSF-201ENST00000310325 WASLO00401 505 aaPredicted RBP29.96■■■□□ 2.39
CTSF-201ENST00000310325 TXNDC2Q86VQ3 553 aa29.96■■■□□ 2.39
CTSF-201ENST00000310325 PHF23Q9BUL5 403 aaPredicted RBP29.95■■■□□ 2.38
CTSF-201ENST00000310325 FER1L4A9Z1Z3 1794 aa29.94■■■□□ 2.38
CTSF-201ENST00000310325 U2AF1L5P0DN76 240 aaPredicted RBP29.94■■■□□ 2.38
CTSF-201ENST00000310325 U2AF1Q01081 240 aaKnown RBP eCLIP29.94■■■□□ 2.38
CTSF-201ENST00000310325 ADAMTS13Q76LX8 1427 aa29.94■■■□□ 2.38
CTSF-201ENST00000310325 NCBP3Q53F19 620 aaKnown RBP29.93■■■□□ 2.38
CTSF-201ENST00000310325 C20orf194Q5TEA3 1177 aa29.93■■■□□ 2.38
CTSF-201ENST00000310325 PLEKHG1Q9ULL1 1385 aa29.92■■■□□ 2.38
CTSF-201ENST00000310325 RRP7AQ9Y3A4 280 aaKnown RBP29.92■■■□□ 2.38
CTSF-201ENST00000310325 PPIP5K1Q6PFW1 1433 aa29.92■■■□□ 2.38
CTSF-201ENST00000310325 NEUROD2Q15784 382 aa29.91■■■□□ 2.38
CTSF-201ENST00000310325 CCDC27Q2M243 656 aa29.91■■■□□ 2.38
CTSF-201ENST00000310325 CPSF1Q10570 1443 aaKnown RBP29.91■■■□□ 2.38
CTSF-201ENST00000310325 WDR63Q8IWG1 891 aa29.89■■■□□ 2.38
CTSF-201ENST00000310325 CDC42BPGQ6DT37 1551 aa29.89■■■□□ 2.38
CTSF-201ENST00000310325 CEBPAP49715 358 aaPredicted RBP29.89■■■□□ 2.38
CTSF-201ENST00000310325 EDC4Q6P2E9 1401 aaKnown RBP29.89■■■□□ 2.37
CTSF-201ENST00000310325 FANCIQ9NVI1 1328 aa29.88■■■□□ 2.37
CTSF-201ENST00000310325 MON2Q7Z3U7 1717 aa29.88■■■□□ 2.37
CTSF-201ENST00000310325 PNPLA6Q8IY17 1366 aa29.87■■■□□ 2.37
CTSF-201ENST00000310325 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.86■■■□□ 2.37
CTSF-201ENST00000310325 LTKP29376 864 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms