RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 ANO2Q9NQ90 1003 aa13.17□□□□□ -0.3
GGA2-201ENST00000309859 TOMM22Q9NS69 142 aa13.17□□□□□ -0.3
GGA2-201ENST00000309859 FOSBP53539 338 aa13.16□□□□□ -0.3
GGA2-201ENST00000309859 TIGD1Q96MW7 591 aa13.16□□□□□ -0.3
GGA2-201ENST00000309859 EIF3AQ14152 1382 aaKnown RBP13.16□□□□□ -0.3
GGA2-201ENST00000309859 GOLGA6L19H0YKK7 550 aa13.16□□□□□ -0.3
GGA2-201ENST00000309859 IBSPP21815 317 aaPredicted RBP13.16□□□□□ -0.3
GGA2-201ENST00000309859 AQRO60306 1485 aaKnown RBP eCLIP13.16□□□□□ -0.32e-7■■■■□ 25.6
GGA2-201ENST00000309859 KLHL40Q2TBA0 621 aa13.16□□□□□ -0.3
GGA2-201ENST00000309859 ADCY5O95622 1261 aa13.16□□□□□ -0.3
GGA2-201ENST00000309859 GOLGA6L1Q8N7Z2 621 aa13.16□□□□□ -0.3
GGA2-201ENST00000309859 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
GGA2-201ENST00000309859 OS9Q13438 667 aaPredicted RBP13.16□□□□□ -0.3
GGA2-201ENST00000309859 GAS2L2Q8NHY3 880 aa13.16□□□□□ -0.3
GGA2-201ENST00000309859 CDC45O75419 566 aa13.15□□□□□ -0.3
GGA2-201ENST00000309859 HSP90B1P14625 803 aaKnown RBP13.15□□□□□ -0.3
GGA2-201ENST00000309859 TCP11L2Q8N4U5 519 aa13.15□□□□□ -0.3
GGA2-201ENST00000309859 NOB1Q9ULX3 412 aaKnown RBP13.15□□□□□ -0.3
GGA2-201ENST00000309859 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
GGA2-201ENST00000309859 NAIPQ13075 1403 aa13.14□□□□□ -0.31
GGA2-201ENST00000309859 BECN2A8MW95 431 aa13.14□□□□□ -0.31
GGA2-201ENST00000309859 MBD3O95983 291 aa13.14□□□□□ -0.31
GGA2-201ENST00000309859 EXOSC9Q06265 439 aaKnown RBP13.14□□□□□ -0.31
GGA2-201ENST00000309859 HFM1A2PYH4 1435 aa13.14□□□□□ -0.31
GGA2-201ENST00000309859 CFTRP13569 1480 aa13.13□□□□□ -0.31
GGA2-201ENST00000309859 SOX12O15370 315 aa13.13□□□□□ -0.31
GGA2-201ENST00000309859 LARP6Q9BRS8 491 aaKnown RBP13.13□□□□□ -0.31
GGA2-201ENST00000309859 CAMK4Q16566 473 aa13.13□□□□□ -0.31
GGA2-201ENST00000309859 TIAM1Q13009 1591 aa13.13□□□□□ -0.31
GGA2-201ENST00000309859 MVPQ14764 893 aaKnown RBP13.13□□□□□ -0.31
GGA2-201ENST00000309859 FAM177A1Q8N128 213 aaPredicted RBP13.12□□□□□ -0.31
GGA2-201ENST00000309859 SPINK5Q9NQ38 1064 aaPredicted RBP13.12□□□□□ -0.31
GGA2-201ENST00000309859 HCLS1P14317 486 aaPredicted RBP13.12□□□□□ -0.31
GGA2-201ENST00000309859 IPO4Q8TEX9 1081 aaKnown RBP13.12□□□□□ -0.31
GGA2-201ENST00000309859 ZNF526Q8TF50 670 aaPredicted RBP13.12□□□□□ -0.31
GGA2-201ENST00000309859 TRMT1Q9NXH9 659 aaKnown RBP13.12□□□□□ -0.31
GGA2-201ENST00000309859 GPS2Q13227 327 aa13.11□□□□□ -0.31
GGA2-201ENST00000309859 CHD1LQ86WJ1 897 aa13.11□□□□□ -0.31
GGA2-201ENST00000309859 MNS1Q8NEH6 495 aa13.11□□□□□ -0.31
GGA2-201ENST00000309859 LRPPRCP42704 1394 aaKnown RBP13.11□□□□□ -0.31
GGA2-201ENST00000309859 BICD2Q8TD16 824 aa13.11□□□□□ -0.31
GGA2-201ENST00000309859 KIF20AO95235 890 aa13.11□□□□□ -0.31
GGA2-201ENST00000309859 RAB3GAP1Q15042 981 aa13.11□□□□□ -0.31
GGA2-201ENST00000309859 INTS3Q68E01 1043 aaKnown RBP13.11□□□□□ -0.31
GGA2-201ENST00000309859 HNRNPMP52272 730 aaKnown RBP eCLIP13.1□□□□□ -0.311e-16■■□□□ 13.2
GGA2-201ENST00000309859 RLBP1P12271 317 aa13.1□□□□□ -0.31
GGA2-201ENST00000309859 RABEP1Q15276 862 aa13.1□□□□□ -0.31
GGA2-201ENST00000309859 STAC3Q96MF2 364 aa13.1□□□□□ -0.31
GGA2-201ENST00000309859 DNAJC2Q99543 621 aaKnown RBP13.1□□□□□ -0.31
GGA2-201ENST00000309859 ANTXR1Q9H6X2 564 aa13.1□□□□□ -0.31
GGA2-201ENST00000309859 CALCOCO1Q9P1Z2 691 aa13.1□□□□□ -0.31
GGA2-201ENST00000309859 PATL2C9JE40 543 aaKnown RBP13.1□□□□□ -0.31
GGA2-201ENST00000309859 MYOM3Q5VTT5 1437 aa13.1□□□□□ -0.31
GGA2-201ENST00000309859 PRDM4Q9UKN5 801 aa13.1□□□□□ -0.31
GGA2-201ENST00000309859 FILIP1Q7Z7B0 1213 aa13.09□□□□□ -0.31
GGA2-201ENST00000309859 PRIMPOLQ96LW4 560 aa13.09□□□□□ -0.31
GGA2-201ENST00000309859 LRSAM1Q6UWE0 723 aa13.09□□□□□ -0.31
GGA2-201ENST00000309859 DHX29Q7Z478 1369 aaKnown RBP13.09□□□□□ -0.31
GGA2-201ENST00000309859 DTNBO60941 627 aa13.09□□□□□ -0.31
GGA2-201ENST00000309859 REC8O95072 547 aa13.09□□□□□ -0.31
GGA2-201ENST00000309859 RIOK3O14730 519 aaKnown RBP13.09□□□□□ -0.31
GGA2-201ENST00000309859 ZGPATQ8N5A5 531 aaKnown RBP13.09□□□□□ -0.31
GGA2-201ENST00000309859 BCL2L12Q9HB09 334 aa13.09□□□□□ -0.31
GGA2-201ENST00000309859 NUTM2DQ5VT03 806 aaPredicted RBP13.08□□□□□ -0.32
GGA2-201ENST00000309859 WWC1Q8IX03 1113 aa13.08□□□□□ -0.32
GGA2-201ENST00000309859 TMEM57Q8N5G2 664 aa13.08□□□□□ -0.32
GGA2-201ENST00000309859 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.32
GGA2-201ENST00000309859 RARSP54136 660 aaKnown RBP13.08□□□□□ -0.32
GGA2-201ENST00000309859 NCOA2Q15596 1464 aa13.08□□□□□ -0.32
GGA2-201ENST00000309859 RUNDC1Q96C34 613 aa13.08□□□□□ -0.32
GGA2-201ENST00000309859 GTF2E1P29083 439 aaPredicted RBP13.08□□□□□ -0.32
GGA2-201ENST00000309859 FMNL2Q96PY5 1086 aa13.08□□□□□ -0.32
GGA2-201ENST00000309859 NOL10Q9BSC4 688 aaKnown RBP13.08□□□□□ -0.32
GGA2-201ENST00000309859 C10orf67Q8IYJ2 551 aa13.07□□□□□ -0.32
GGA2-201ENST00000309859 MYRIPQ8NFW9 859 aa13.07□□□□□ -0.32
GGA2-201ENST00000309859 CEBPZQ03701 1054 aaKnown RBP13.07□□□□□ -0.32
GGA2-201ENST00000309859 CREBRFQ8IUR6 639 aa13.07□□□□□ -0.32
GGA2-201ENST00000309859 PLEKHH1Q9ULM0 1364 aa13.07□□□□□ -0.32
GGA2-201ENST00000309859 TTLL5Q6EMB2 1281 aa13.07□□□□□ -0.32
GGA2-201ENST00000309859 PTPRKQ15262 1439 aa13.07□□□□□ -0.32
GGA2-201ENST00000309859 GTF2A1P52655 376 aaPredicted RBP13.07□□□□□ -0.32
GGA2-201ENST00000309859 ATP2B3Q16720 1220 aa13.07□□□□□ -0.32
GGA2-201ENST00000309859 TBC1D9Q6ZT07 1266 aa13.07□□□□□ -0.32
GGA2-201ENST00000309859 SMC3Q9UQE7 1217 aa13.07□□□□□ -0.32
GGA2-201ENST00000309859 NOM1Q5C9Z4 860 aaKnown RBP13.06□□□□□ -0.32
GGA2-201ENST00000309859 UPF3BQ9BZI7 483 aaKnown RBP13.06□□□□□ -0.32
GGA2-201ENST00000309859 GTF3C6Q969F1 213 aa13.06□□□□□ -0.32
GGA2-201ENST00000309859 STK26Q9P289 416 aa13.06□□□□□ -0.32
GGA2-201ENST00000309859 MCM5P33992 734 aa13.06□□□□□ -0.32
GGA2-201ENST00000309859 GIMAP6Q6P9H5 292 aa13.06□□□□□ -0.32
GGA2-201ENST00000309859 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
GGA2-201ENST00000309859 ARGLU1Q9NWB6 273 aaPredicted RBP13.06□□□□□ -0.32
GGA2-201ENST00000309859 PEG3Q9GZU2 1588 aa13.05□□□□□ -0.32
GGA2-201ENST00000309859 CWC15Q9P013 229 aaKnown RBP13.05□□□□□ -0.32
GGA2-201ENST00000309859 TRAK1Q9UPV9 953 aa13.04□□□□□ -0.32
GGA2-201ENST00000309859 NKTRP30414 1462 aaKnown RBP13.04□□□□□ -0.32
GGA2-201ENST00000309859 PKP1Q13835 747 aa13.04□□□□□ -0.32
GGA2-201ENST00000309859 SMARCA5O60264 1052 aaPredicted RBP13.04□□□□□ -0.32
GGA2-201ENST00000309859 KRT222Q8N1A0 295 aa13.04□□□□□ -0.32
GGA2-201ENST00000309859 CKAP2LQ8IYA6 745 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms