RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 NUTM2GQ5VZR2 741 aa16.04■□□□□ 0.16
RETREG3-201ENST00000309428 EVC2Q86UK5 1308 aa16.04■□□□□ 0.16
RETREG3-201ENST00000309428 RSPH6AQ9H0K4 717 aa16.03■□□□□ 0.16
RETREG3-201ENST00000309428 RBM33Q96EV2 1170 aaKnown RBP16.03■□□□□ 0.16
RETREG3-201ENST00000309428 ZRANB1Q9UGI0 708 aa16.03■□□□□ 0.16
RETREG3-201ENST00000309428 HSP90AA2PQ14568 343 aaPredicted RBP16.02■□□□□ 0.16
RETREG3-201ENST00000309428 ADGBQ8N7X0 1667 aa16.02■□□□□ 0.16
RETREG3-201ENST00000309428 RLBP1P12271 317 aa16.02■□□□□ 0.15
RETREG3-201ENST00000309428 RUNDC1Q96C34 613 aa16.02■□□□□ 0.15
RETREG3-201ENST00000309428 RRS1Q15050 365 aaKnown RBP16.01■□□□□ 0.15
RETREG3-201ENST00000309428 COL17A1Q9UMD9 1497 aaPredicted RBP16.01■□□□□ 0.15
RETREG3-201ENST00000309428 ASXL2Q76L83 1435 aa16.01■□□□□ 0.15
RETREG3-201ENST00000309428 NECTIN2Q92692 538 aa16.01■□□□□ 0.15
RETREG3-201ENST00000309428 LTV1Q96GA3 475 aaPredicted RBP16.01■□□□□ 0.15
RETREG3-201ENST00000309428 SHANK2Q9UPX8 1470 aa16.01■□□□□ 0.15
RETREG3-201ENST00000309428 CHD1O14646 1710 aa16.01■□□□□ 0.15
RETREG3-201ENST00000309428 DCTN1Q14203 1278 aa16.01■□□□□ 0.15
RETREG3-201ENST00000309428 LMOD2Q6P5Q4 547 aa16■□□□□ 0.15
RETREG3-201ENST00000309428 HSCBQ8IWL3 235 aa16■□□□□ 0.15
RETREG3-201ENST00000309428 HDGFL2Q7Z4V5 671 aaPredicted RBP16■□□□□ 0.15
RETREG3-201ENST00000309428 CD109Q6YHK3 1445 aa15.99■□□□□ 0.15
RETREG3-201ENST00000309428 SEC24BO95487 1268 aa15.99■□□□□ 0.15
RETREG3-201ENST00000309428 MYH16Q9H6N6 1097 aa15.99■□□□□ 0.15
RETREG3-201ENST00000309428 SCAF11Q99590 1463 aaKnown RBP15.98■□□□□ 0.15
RETREG3-201ENST00000309428 LNPKQ9C0E8 428 aa15.98■□□□□ 0.15
RETREG3-201ENST00000309428 ABCC2Q92887 1545 aa15.97■□□□□ 0.15
RETREG3-201ENST00000309428 RNF123Q5XPI4 1314 aa15.97■□□□□ 0.15
RETREG3-201ENST00000309428 CDK19Q9BWU1 502 aa15.97■□□□□ 0.15
RETREG3-201ENST00000309428 KDM5DQ9BY66 1539 aa15.97■□□□□ 0.15
RETREG3-201ENST00000309428 CDC42BPBQ9Y5S2 1711 aa15.97■□□□□ 0.15
RETREG3-201ENST00000309428 PRKAR2BP31323 418 aa15.97■□□□□ 0.15
RETREG3-201ENST00000309428 TERF2IPQ9NYB0 399 aa15.96■□□□□ 0.15
RETREG3-201ENST00000309428 DUOX2Q9NRD8 1548 aa15.96■□□□□ 0.15
RETREG3-201ENST00000309428 DNTTIP2Q5QJE6 756 aaKnown RBP15.95■□□□□ 0.14
RETREG3-201ENST00000309428 SLC26A8Q96RN1 970 aa15.95■□□□□ 0.14
RETREG3-201ENST00000309428 PCDHB15Q9Y5E8 787 aa15.95■□□□□ 0.14
RETREG3-201ENST00000309428 PDZRN3Q9UPQ7 1066 aa15.95■□□□□ 0.14
RETREG3-201ENST00000309428 EMILIN1Q9Y6C2 1016 aa15.95■□□□□ 0.14
RETREG3-201ENST00000309428 PLCB2Q00722 1185 aa15.95■□□□□ 0.14
RETREG3-201ENST00000309428 DIAPH1O60610 1272 aaKnown RBP15.94■□□□□ 0.14
RETREG3-201ENST00000309428 CEBPAP49715 358 aaPredicted RBP15.94■□□□□ 0.14
RETREG3-201ENST00000309428 PMFBP1Q8TBY8 1022 aa15.94■□□□□ 0.14
RETREG3-201ENST00000309428 GOLGA6L22H0YM25 854 aa15.93■□□□□ 0.14
RETREG3-201ENST00000309428 PTMAP06454 111 aaKnown RBP15.93■□□□□ 0.14
RETREG3-201ENST00000309428 ATP10AO60312 1499 aa15.93■□□□□ 0.14
RETREG3-201ENST00000309428 RARSP54136 660 aaKnown RBP15.93■□□□□ 0.14
RETREG3-201ENST00000309428 FOXD4L5Q5VV16 416 aaPredicted RBP15.93■□□□□ 0.14
RETREG3-201ENST00000309428 FOXD4L4Q8WXT5 416 aaPredicted RBP15.93■□□□□ 0.14
RETREG3-201ENST00000309428 NOB1Q9ULX3 412 aaKnown RBP15.93■□□□□ 0.14
RETREG3-201ENST00000309428 FAM83GA6ND36 823 aa15.92■□□□□ 0.14
RETREG3-201ENST00000309428 NME9Q86XW9 330 aa15.92■□□□□ 0.14
RETREG3-201ENST00000309428 MIS18AQ9NYP9 233 aa15.92■□□□□ 0.14
RETREG3-201ENST00000309428 ZKSCAN2Q63HK3 967 aa15.92■□□□□ 0.14
RETREG3-201ENST00000309428 SLC4A10Q6U841 1118 aa15.92■□□□□ 0.14
RETREG3-201ENST00000309428 DZIP1LQ8IYY4 767 aaKnown RBP15.92■□□□□ 0.14
RETREG3-201ENST00000309428 C14orf93Q9H972 538 aaKnown RBP15.92■□□□□ 0.14
RETREG3-201ENST00000309428 TRHP20396 242 aaPredicted RBP15.91■□□□□ 0.14
RETREG3-201ENST00000309428 SSH1Q8WYL5 1049 aa15.9■□□□□ 0.14
RETREG3-201ENST00000309428 GPRASP1Q5JY77 1395 aa15.9■□□□□ 0.14
RETREG3-201ENST00000309428 WDR7Q9Y4E6 1490 aa15.9■□□□□ 0.14
RETREG3-201ENST00000309428 ANKRD45Q5TZF3 282 aa15.89■□□□□ 0.13
RETREG3-201ENST00000309428 RWDD1Q9H446 243 aaPredicted RBP15.89■□□□□ 0.13
RETREG3-201ENST00000309428 MSNP26038 577 aaKnown RBP15.88■□□□□ 0.13
RETREG3-201ENST00000309428 PREX2Q70Z35 1606 aa15.88■□□□□ 0.13
RETREG3-201ENST00000309428 TMPOP42166 694 aaKnown RBP15.88■□□□□ 0.13
RETREG3-201ENST00000309428 PKNOX2Q96KN3 472 aa15.87■□□□□ 0.13
RETREG3-201ENST00000309428 FOXD4L6Q3SYB3 417 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-201ENST00000309428 FOXD4L3Q6VB84 417 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-201ENST00000309428 CROCC2H7BZ55 1655 aa15.87■□□□□ 0.13
RETREG3-201ENST00000309428 FYB1O15117 783 aa15.87■□□□□ 0.13
RETREG3-201ENST00000309428 KRT24Q2M2I5 525 aa15.87■□□□□ 0.13
RETREG3-201ENST00000309428 C8orf34Q49A92 452 aa15.87■□□□□ 0.13
RETREG3-201ENST00000309428 MAST1Q9Y2H9 1570 aa15.87■□□□□ 0.13
RETREG3-201ENST00000309428 TMEM57Q8N5G2 664 aa15.86■□□□□ 0.13
RETREG3-201ENST00000309428 ASXL1Q8IXJ9 1541 aa15.86■□□□□ 0.13
RETREG3-201ENST00000309428 FAM43AQ8N2R8 423 aa15.86■□□□□ 0.13
RETREG3-201ENST00000309428 ARHGEF5Q12774 1597 aa15.86■□□□□ 0.13
RETREG3-201ENST00000309428 NOL8Q76FK4 1167 aaKnown RBP15.85■□□□□ 0.13
RETREG3-201ENST00000309428 ADCY10Q96PN6 1610 aa15.85■□□□□ 0.13
RETREG3-201ENST00000309428 MYO5CQ9NQX4 1742 aa15.84■□□□□ 0.13
RETREG3-201ENST00000309428 PHACTR3Q96KR7 559 aa15.84■□□□□ 0.13
RETREG3-201ENST00000309428 PANK2Q9BZ23 570 aa15.84■□□□□ 0.13
RETREG3-201ENST00000309428 NKTRP30414 1462 aaKnown RBP15.84■□□□□ 0.13
RETREG3-201ENST00000309428 TRIM27P14373 513 aa15.84■□□□□ 0.13
RETREG3-201ENST00000309428 TRAK2O60296 914 aa15.83■□□□□ 0.13
RETREG3-201ENST00000309428 FAM13BQ9NYF5 915 aa15.83■□□□□ 0.12
RETREG3-201ENST00000309428 ZCCHC11Q5TAX3 1644 aaKnown RBP15.83■□□□□ 0.12
RETREG3-201ENST00000309428 ATP7AQ04656 1500 aa15.82■□□□□ 0.12
RETREG3-201ENST00000309428 TSPYL6Q8N831 410 aa15.82■□□□□ 0.12
RETREG3-201ENST00000309428 MCM10Q7L590 875 aa15.82■□□□□ 0.12
RETREG3-201ENST00000309428 NGDNQ8NEJ9 315 aaKnown RBP15.82■□□□□ 0.12
RETREG3-201ENST00000309428 COG3Q96JB2 828 aa15.82■□□□□ 0.12
RETREG3-201ENST00000309428 TRPM1Q7Z4N2 1603 aa15.82■□□□□ 0.12
RETREG3-201ENST00000309428 NPATQ14207 1427 aa15.81■□□□□ 0.12
RETREG3-201ENST00000309428 RBM10P98175 930 aaKnown RBP15.81■□□□□ 0.12
RETREG3-201ENST00000309428 SULT6B1Q6IMI4 303 aa15.81■□□□□ 0.12
RETREG3-201ENST00000309428 AEBP1Q8IUX7 1158 aa15.81■□□□□ 0.12
RETREG3-201ENST00000309428 UBE2Q2Q8WVN8 375 aa15.8■□□□□ 0.12
RETREG3-201ENST00000309428 GBP4Q96PP9 640 aa15.8■□□□□ 0.12
RETREG3-201ENST00000309428 C22orf23Q9BZE7 217 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms