RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 KANK1Q14678 1352 aa14.06□□□□□ -0.16
PTPN7-201ENST00000309017 SYNMO15061 1565 aa14.05□□□□□ -0.16
PTPN7-201ENST00000309017 TSR2Q969E8 191 aaKnown RBP14.05□□□□□ -0.16
PTPN7-201ENST00000309017 FOXD4L1Q9NU39 408 aa14.05□□□□□ -0.16
PTPN7-201ENST00000309017 CLASP1Q7Z460 1538 aa14.05□□□□□ -0.16
PTPN7-201ENST00000309017 DUOX2Q9NRD8 1548 aa14.05□□□□□ -0.16
PTPN7-201ENST00000309017 DDX11L8A8MPP1 907 aa14.04□□□□□ -0.16
PTPN7-201ENST00000309017 MRE11P49959 708 aa14.04□□□□□ -0.16
PTPN7-201ENST00000309017 WDR63Q8IWG1 891 aa14.04□□□□□ -0.16
PTPN7-201ENST00000309017 SCAPERQ9BY12 1400 aa14.04□□□□□ -0.16
PTPN7-201ENST00000309017 NSD3Q9BZ95 1437 aa14.03□□□□□ -0.16
PTPN7-201ENST00000309017 ADGRF5Q8IZF2 1346 aa14.03□□□□□ -0.16
PTPN7-201ENST00000309017 UNC13BO14795 1591 aa14.03□□□□□ -0.16
PTPN7-201ENST00000309017 MAST1Q9Y2H9 1570 aa14.03□□□□□ -0.16
PTPN7-201ENST00000309017 CDC42BPBQ9Y5S2 1711 aa14.02□□□□□ -0.16
PTPN7-201ENST00000309017 HSP90AA2PQ14568 343 aaPredicted RBP14.02□□□□□ -0.16
PTPN7-201ENST00000309017 PREX2Q70Z35 1606 aa14.02□□□□□ -0.16
PTPN7-201ENST00000309017 GRPEL1Q9HAV7 217 aa14.02□□□□□ -0.17
PTPN7-201ENST00000309017 IQGAP3Q86VI3 1631 aa14.02□□□□□ -0.17
PTPN7-201ENST00000309017 POLR3AO14802 1390 aaPredicted RBP14.02□□□□□ -0.17
PTPN7-201ENST00000309017 EXOSC9Q06265 439 aaKnown RBP14.01□□□□□ -0.17
PTPN7-201ENST00000309017 GBP4Q96PP9 640 aa14.01□□□□□ -0.17
PTPN7-201ENST00000309017 LNPKQ9C0E8 428 aa14.01□□□□□ -0.17
PTPN7-201ENST00000309017 SAFB2Q14151 953 aaKnown RBP eCLIP14□□□□□ -0.17
PTPN7-201ENST00000309017 DDX19BQ9UMR2 479 aa14□□□□□ -0.17
PTPN7-201ENST00000309017 ATP10AO60312 1499 aa14□□□□□ -0.17
PTPN7-201ENST00000309017 ANP32BQ92688 251 aaKnown RBP14□□□□□ -0.17
PTPN7-201ENST00000309017 CLCN1P35523 988 aa13.99□□□□□ -0.17
PTPN7-201ENST00000309017 VSIG10Q8N0Z9 540 aa13.99□□□□□ -0.17
PTPN7-201ENST00000309017 TMEM132EQ6IEE7 984 aa13.99□□□□□ -0.17
PTPN7-201ENST00000309017 TTC37Q6PGP7 1564 aa13.98□□□□□ -0.17
PTPN7-201ENST00000309017 NLRP1Q9C000 1473 aa13.98□□□□□ -0.17
PTPN7-201ENST00000309017 FSD2A1L4K1 749 aa13.98□□□□□ -0.17
PTPN7-201ENST00000309017 MADDQ8WXG6 1647 aa13.98□□□□□ -0.17
PTPN7-201ENST00000309017 ESPNB1AK53 854 aa13.98□□□□□ -0.17
PTPN7-201ENST00000309017 TRAPPC8Q9Y2L5 1435 aa13.97□□□□□ -0.17
PTPN7-201ENST00000309017 TRIM27P14373 513 aa13.97□□□□□ -0.17
PTPN7-201ENST00000309017 PLPPR3Q6T4P5 718 aa13.97□□□□□ -0.17
PTPN7-201ENST00000309017 KDM5AP29375 1690 aaKnown RBP13.97□□□□□ -0.17
PTPN7-201ENST00000309017 RNF17Q9BXT8 1623 aaKnown RBP13.97□□□□□ -0.17
PTPN7-201ENST00000309017 GOLGA6L22H0YM25 854 aa13.97□□□□□ -0.17
PTPN7-201ENST00000309017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.96□□□□□ -0.17
PTPN7-201ENST00000309017 SSH1Q8WYL5 1049 aa13.96□□□□□ -0.17
PTPN7-201ENST00000309017 NOB1Q9ULX3 412 aaKnown RBP13.96□□□□□ -0.17
PTPN7-201ENST00000309017 ERVK-7P63135 1459 aa13.96□□□□□ -0.17
PTPN7-201ENST00000309017 NCLP19338 710 aaKnown RBP13.96□□□□□ -0.17
PTPN7-201ENST00000309017 NUTM2DQ5VT03 806 aaPredicted RBP13.96□□□□□ -0.17
PTPN7-201ENST00000309017 ATF7IPQ6VMQ6 1270 aa13.96□□□□□ -0.18
PTPN7-201ENST00000309017 IPO8O15397 1037 aaKnown RBP13.95□□□□□ -0.18
PTPN7-201ENST00000309017 TMEM57Q8N5G2 664 aa13.95□□□□□ -0.18
PTPN7-201ENST00000309017 TNPO1Q92973 898 aaKnown RBP13.95□□□□□ -0.18
PTPN7-201ENST00000309017 ANKRD45Q5TZF3 282 aa13.94□□□□□ -0.18
PTPN7-201ENST00000309017 IQGAP1P46940 1657 aa13.94□□□□□ -0.18
PTPN7-201ENST00000309017 PLXNC1O60486 1568 aa13.93□□□□□ -0.18
PTPN7-201ENST00000309017 CCDC27Q2M243 656 aa13.92□□□□□ -0.18
PTPN7-201ENST00000309017 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
PTPN7-201ENST00000309017 HDAC1Q13547 482 aaPredicted RBP13.92□□□□□ -0.18
PTPN7-201ENST00000309017 ZMYM3Q14202 1370 aa13.92□□□□□ -0.18
PTPN7-201ENST00000309017 RIPK4P57078 832 aa13.92□□□□□ -0.18
PTPN7-201ENST00000309017 PLCH2O75038 1416 aa13.91□□□□□ -0.18
PTPN7-201ENST00000309017 SRPK2P78362 688 aaKnown RBP13.91□□□□□ -0.18
PTPN7-201ENST00000309017 SKOR2Q2VWA4 1001 aaPredicted RBP13.91□□□□□ -0.18
PTPN7-201ENST00000309017 GGNBP2Q9H3C7 697 aa13.91□□□□□ -0.18
PTPN7-201ENST00000309017 DDX49Q9Y6V7 483 aaKnown RBP13.91□□□□□ -0.18
PTPN7-201ENST00000309017 CABP2Q9NPB3 220 aa13.91□□□□□ -0.18
PTPN7-201ENST00000309017 TRPM2O94759 1503 aa13.9□□□□□ -0.18
PTPN7-201ENST00000309017 TMPOP42166 694 aaKnown RBP13.9□□□□□ -0.18
PTPN7-201ENST00000309017 ISY1Q9ULR0 285 aaKnown RBP13.9□□□□□ -0.18
PTPN7-201ENST00000309017 C1orf115Q9H7X2 142 aa13.9□□□□□ -0.18
PTPN7-201ENST00000309017 STK26Q9P289 416 aa13.9□□□□□ -0.18
PTPN7-201ENST00000309017 CT47B1P0C2W7 299 aaPredicted RBP13.9□□□□□ -0.19
PTPN7-201ENST00000309017 GGT6Q6P531 493 aa13.9□□□□□ -0.19
PTPN7-201ENST00000309017 CHD1LQ86WJ1 897 aa13.9□□□□□ -0.19
PTPN7-201ENST00000309017 PTPRTO14522 1441 aa13.89□□□□□ -0.19
PTPN7-201ENST00000309017 RRP9O43818 475 aaKnown RBP13.89□□□□□ -0.19
PTPN7-201ENST00000309017 SMC5Q8IY18 1101 aa13.89□□□□□ -0.19
PTPN7-201ENST00000309017 PKNOX2Q96KN3 472 aa13.89□□□□□ -0.19
PTPN7-201ENST00000309017 KIF16BQ96L93 1317 aa13.89□□□□□ -0.19
PTPN7-201ENST00000309017 MSNP26038 577 aaKnown RBP13.89□□□□□ -0.19
PTPN7-201ENST00000309017 EVC2Q86UK5 1308 aa13.89□□□□□ -0.19
PTPN7-201ENST00000309017 CLTCL1P53675 1640 aa13.89□□□□□ -0.19
PTPN7-201ENST00000309017 MYOM1P52179 1685 aa13.89□□□□□ -0.19
PTPN7-201ENST00000309017 PHF23Q9BUL5 403 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-201ENST00000309017 ELL2O00472 640 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-201ENST00000309017 PTMSP20962 102 aa13.88□□□□□ -0.19
PTPN7-201ENST00000309017 NOS1P29475 1434 aa13.88□□□□□ -0.19
PTPN7-201ENST00000309017 CIZ1Q9ULV3 898 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-201ENST00000309017 NASPP49321 788 aaPredicted RBP13.87□□□□□ -0.19
PTPN7-201ENST00000309017 GAS2L3Q86XJ1 694 aa13.87□□□□□ -0.19
PTPN7-201ENST00000309017 UGGT1Q9NYU2 1555 aa13.87□□□□□ -0.19
PTPN7-201ENST00000309017 SPHKAPQ2M3C7 1700 aa13.87□□□□□ -0.19
PTPN7-201ENST00000309017 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
PTPN7-201ENST00000309017 ERBB4Q15303 1308 aa13.86□□□□□ -0.19
PTPN7-201ENST00000309017 K7ELQ4 463 aaPredicted RBP13.86□□□□□ -0.19
PTPN7-201ENST00000309017 SSFA2P28290 1259 aa13.86□□□□□ -0.19
PTPN7-201ENST00000309017 NUCB1Q02818 461 aa13.86□□□□□ -0.19
PTPN7-201ENST00000309017 SNX21Q969T3 373 aa13.86□□□□□ -0.19
PTPN7-201ENST00000309017 ZBTB40Q9NUA8 1239 aa13.86□□□□□ -0.19
PTPN7-201ENST00000309017 RBM25P49756 843 aaKnown RBP13.85□□□□□ -0.19
PTPN7-201ENST00000309017 RAB3GAP1Q15042 981 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms