RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 RRP7AQ9Y3A4 280 aaKnown RBP20.71■□□□□ 0.91
CCDC8-201ENST00000307522 TRPM2O94759 1503 aa20.7■□□□□ 0.91
CCDC8-201ENST00000307522 PDE3BQ13370 1112 aa20.7■□□□□ 0.9
CCDC8-201ENST00000307522 AMER1Q5JTC6 1135 aaPredicted RBP20.7■□□□□ 0.9
CCDC8-201ENST00000307522 MROH1Q8NDA8 1641 aa20.69■□□□□ 0.9
CCDC8-201ENST00000307522 BCAR3O75815 825 aa20.69■□□□□ 0.9
CCDC8-201ENST00000307522 PPRC1Q5VV67 1664 aaKnown RBP20.69■□□□□ 0.9
CCDC8-201ENST00000307522 WAPLQ7Z5K2 1190 aa20.68■□□□□ 0.9
CCDC8-201ENST00000307522 FRMPD1Q5SYB0 1578 aa20.68■□□□□ 0.9
CCDC8-201ENST00000307522 BECN1Q14457 450 aa20.68■□□□□ 0.9
CCDC8-201ENST00000307522 SCAF11Q99590 1463 aaKnown RBP20.68■□□□□ 0.9
CCDC8-201ENST00000307522 SPHKAPQ2M3C7 1700 aa20.67■□□□□ 0.9
CCDC8-201ENST00000307522 ARAP3Q8WWN8 1544 aa20.67■□□□□ 0.9
CCDC8-201ENST00000307522 ABCA6Q8N139 1617 aa20.66■□□□□ 0.9
CCDC8-201ENST00000307522 PARD3Q8TEW0 1356 aa20.66■□□□□ 0.9
CCDC8-201ENST00000307522 ESPNB1AK53 854 aa20.66■□□□□ 0.9
CCDC8-201ENST00000307522 PRAM1Q96QH2 718 aa20.66■□□□□ 0.9
CCDC8-201ENST00000307522 TBC1D2Q9BYX2 928 aa20.65■□□□□ 0.9
CCDC8-201ENST00000307522 MYH16Q9H6N6 1097 aa20.65■□□□□ 0.9
CCDC8-201ENST00000307522 C14orf93Q9H972 538 aaKnown RBP20.65■□□□□ 0.9
CCDC8-201ENST00000307522 RIMBP3CA6NJZ7 1639 aa20.64■□□□□ 0.9
CCDC8-201ENST00000307522 RIMBP3BA6NNM3 1639 aa20.64■□□□□ 0.9
CCDC8-201ENST00000307522 RIMBP3Q9UFD9 1639 aa20.64■□□□□ 0.9
CCDC8-201ENST00000307522 MADDQ8WXG6 1647 aa20.63■□□□□ 0.89
CCDC8-201ENST00000307522 ZBTB7CA1YPR0 619 aa20.63■□□□□ 0.89
CCDC8-201ENST00000307522 APAF1O14727 1248 aa20.63■□□□□ 0.89
CCDC8-201ENST00000307522 CDCA8Q53HL2 280 aa20.63■□□□□ 0.89
CCDC8-201ENST00000307522 TET3O43151 1660 aa20.63■□□□□ 0.89
CCDC8-201ENST00000307522 VGFO15240 615 aaPredicted RBP20.63■□□□□ 0.89
CCDC8-201ENST00000307522 TRAK2O60296 914 aa20.63■□□□□ 0.89
CCDC8-201ENST00000307522 MORC1Q86VD1 984 aa20.63■□□□□ 0.89
CCDC8-201ENST00000307522 GGNBP2Q9H3C7 697 aa20.63■□□□□ 0.89
CCDC8-201ENST00000307522 ANTXR1Q9H6X2 564 aa20.63■□□□□ 0.89
CCDC8-201ENST00000307522 EFCAB6Q5THR3 1501 aa20.62■□□□□ 0.89
CCDC8-201ENST00000307522 NCKAP5LQ9HCH0 1330 aa20.62■□□□□ 0.89
CCDC8-201ENST00000307522 TRIM44Q96DX7 344 aaPredicted RBP20.62■□□□□ 0.89
CCDC8-201ENST00000307522 MLH3Q9UHC1 1453 aa20.62■□□□□ 0.89
CCDC8-201ENST00000307522 MCM4P33991 863 aa20.61■□□□□ 0.89
CCDC8-201ENST00000307522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.61■□□□□ 0.89
CCDC8-201ENST00000307522 HECW2Q9P2P5 1572 aa20.61■□□□□ 0.89
CCDC8-201ENST00000307522 EIF3AQ14152 1382 aaKnown RBP20.61■□□□□ 0.89
CCDC8-201ENST00000307522 SPINK5Q9NQ38 1064 aaPredicted RBP20.6■□□□□ 0.89
CCDC8-201ENST00000307522 RNF17Q9BXT8 1623 aaKnown RBP20.6■□□□□ 0.89
CCDC8-201ENST00000307522 COG6Q9Y2V7 657 aa20.6■□□□□ 0.89
CCDC8-201ENST00000307522 DUSP27Q5VZP5 1158 aa20.59■□□□□ 0.89
CCDC8-201ENST00000307522 PANK1Q8TE04 598 aa20.59■□□□□ 0.89
CCDC8-201ENST00000307522 MROH2AA6NES4 1674 aa20.59■□□□□ 0.89
CCDC8-201ENST00000307522 FSD2A1L4K1 749 aa20.59■□□□□ 0.89
CCDC8-201ENST00000307522 KIAA1211Q6ZU35 1233 aa20.59■□□□□ 0.89
CCDC8-201ENST00000307522 FAM13BQ9NYF5 915 aa20.59■□□□□ 0.89
CCDC8-201ENST00000307522 GRPEL1Q9HAV7 217 aa20.58■□□□□ 0.89
CCDC8-201ENST00000307522 PLEKHH1Q9ULM0 1364 aa20.58■□□□□ 0.89
CCDC8-201ENST00000307522 PRDM10Q9NQV6 1147 aa20.58■□□□□ 0.88
CCDC8-201ENST00000307522 ABCC3O15438 1527 aa20.58■□□□□ 0.88
CCDC8-201ENST00000307522 SOX12O15370 315 aa20.57■□□□□ 0.88
CCDC8-201ENST00000307522 FOXD4L1Q9NU39 408 aa20.57■□□□□ 0.88
CCDC8-201ENST00000307522 DMRT2Q9Y5R5 561 aa20.57■□□□□ 0.88
CCDC8-201ENST00000307522 TXNDC2Q86VQ3 553 aa20.57■□□□□ 0.88
CCDC8-201ENST00000307522 CANXP27824 592 aaKnown RBP20.57■□□□□ 0.88
CCDC8-201ENST00000307522 POLR1AO95602 1720 aaPredicted RBP20.56■□□□□ 0.88
CCDC8-201ENST00000307522 DEPDC5O75140 1603 aa20.56■□□□□ 0.88
CCDC8-201ENST00000307522 GAS2L3Q86XJ1 694 aa20.55■□□□□ 0.88
CCDC8-201ENST00000307522 VWDEQ8N2E2 1590 aa20.54■□□□□ 0.88
CCDC8-201ENST00000307522 ERVK-7P63135 1459 aa20.54■□□□□ 0.88
CCDC8-201ENST00000307522 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
CCDC8-201ENST00000307522 MTHFSP49914 203 aa20.54■□□□□ 0.88
CCDC8-201ENST00000307522 EIF2AK4Q9P2K8 1649 aaKnown RBP20.53■□□□□ 0.88
CCDC8-201ENST00000307522 DIP2CQ9Y2E4 1556 aa20.53■□□□□ 0.88
CCDC8-201ENST00000307522 NEO1Q92859 1461 aa20.53■□□□□ 0.88
CCDC8-201ENST00000307522 U2SURPO15042 1029 aaKnown RBP20.53■□□□□ 0.88
CCDC8-201ENST00000307522 MFAP1P55081 439 aaKnown RBP20.52■□□□□ 0.88
CCDC8-201ENST00000307522 RBM33Q96EV2 1170 aaKnown RBP20.52■□□□□ 0.88
CCDC8-201ENST00000307522 ZHX1Q9UKY1 873 aaPredicted RBP20.52■□□□□ 0.88
CCDC8-201ENST00000307522 SLC26A8Q96RN1 970 aa20.51■□□□□ 0.87
CCDC8-201ENST00000307522 BCL2L13Q9BXK5 485 aa20.51■□□□□ 0.87
CCDC8-201ENST00000307522 TNNQ9UQP3 1299 aa20.51■□□□□ 0.87
CCDC8-201ENST00000307522 GOLGA2Q08379 1002 aa20.51■□□□□ 0.87
CCDC8-201ENST00000307522 CABP1Q9NZU7 370 aa20.51■□□□□ 0.87
CCDC8-201ENST00000307522 MRE11P49959 708 aa20.51■□□□□ 0.87
CCDC8-201ENST00000307522 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.51■□□□□ 0.87
CCDC8-201ENST00000307522 UPF2Q9HAU5 1272 aaKnown RBP20.5■□□□□ 0.87
CCDC8-201ENST00000307522 SLC52A1Q9NWF4 448 aa20.5■□□□□ 0.87
CCDC8-201ENST00000307522 KIF1BO60333 1816 aa20.49■□□□□ 0.87
CCDC8-201ENST00000307522 CLUAP1Q96AJ1 413 aa20.49■□□□□ 0.87
CCDC8-201ENST00000307522 SIGLEC1Q9BZZ2 1709 aa20.49■□□□□ 0.87
CCDC8-201ENST00000307522 MAP3K4Q9Y6R4 1608 aa20.48■□□□□ 0.87
CCDC8-201ENST00000307522 ZRANB1Q9UGI0 708 aa20.48■□□□□ 0.87
CCDC8-201ENST00000307522 PDCL3Q9H2J4 239 aa20.47■□□□□ 0.87
CCDC8-201ENST00000307522 EVC2Q86UK5 1308 aa20.47■□□□□ 0.87
CCDC8-201ENST00000307522 CDK19Q9BWU1 502 aa20.47■□□□□ 0.87
CCDC8-201ENST00000307522 PRDM4Q9UKN5 801 aa20.47■□□□□ 0.87
CCDC8-201ENST00000307522 PIK3C2GO75747 1445 aa20.47■□□□□ 0.87
CCDC8-201ENST00000307522 U2AF1L5P0DN76 240 aaPredicted RBP20.46■□□□□ 0.87
CCDC8-201ENST00000307522 U2AF1Q01081 240 aaKnown RBP eCLIP20.46■□□□□ 0.87
CCDC8-201ENST00000307522 R3HCC1Q9Y3T6 440 aaKnown RBP20.45■□□□□ 0.86
CCDC8-201ENST00000307522 STAC3Q96MF2 364 aa20.45■□□□□ 0.86
CCDC8-201ENST00000307522 TBC1D32Q96NH3 1257 aa20.44■□□□□ 0.86
CCDC8-201ENST00000307522 SYNMO15061 1565 aa20.44■□□□□ 0.86
CCDC8-201ENST00000307522 ADGRB3O60242 1522 aa20.42■□□□□ 0.86
CCDC8-201ENST00000307522 RIPK4P57078 832 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms