RNA–Protein interactions for RNA: ENST00000306901.8

CHRNA7-201, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRNA7, Length 6,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-201ENST00000306901 ODF2Q5BJF6 829 aa17.21■□□□□ 0.35
CHRNA7-201ENST00000306901 C1orf141Q5JVX7 400 aa17.21■□□□□ 0.35
CHRNA7-201ENST00000306901 EPS15P42566 896 aa17.21■□□□□ 0.35
CHRNA7-201ENST00000306901 FAM177A1Q8N128 213 aaPredicted RBP17.21■□□□□ 0.35
CHRNA7-201ENST00000306901 ERCC4Q92889 916 aaPredicted RBP17.21■□□□□ 0.35
CHRNA7-201ENST00000306901 ABCC8Q09428 1581 aa17.2■□□□□ 0.34
CHRNA7-201ENST00000306901 ERICH2A1L162 156 aa17.2■□□□□ 0.34
CHRNA7-201ENST00000306901 FAM193AP78312 1265 aa17.2■□□□□ 0.34
CHRNA7-201ENST00000306901 TRHP20396 242 aaPredicted RBP17.2■□□□□ 0.34
CHRNA7-201ENST00000306901 TRIM34Q9BYJ4 488 aa17.2■□□□□ 0.34
CHRNA7-201ENST00000306901 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
CHRNA7-201ENST00000306901 DHX57Q6P158 1386 aaKnown RBP17.19■□□□□ 0.34
CHRNA7-201ENST00000306901 G3BP1Q13283 466 aaKnown RBP eCLIP17.19■□□□□ 0.34
CHRNA7-201ENST00000306901 STK11IPQ8N1F8 1099 aa17.19■□□□□ 0.34
CHRNA7-201ENST00000306901 FIBPO43427 364 aa17.18■□□□□ 0.34
CHRNA7-201ENST00000306901 CDC45O75419 566 aa17.18■□□□□ 0.34
CHRNA7-201ENST00000306901 OFD1O75665 1012 aa17.18■□□□□ 0.34
CHRNA7-201ENST00000306901 ATP2B1P20020 1258 aa17.18■□□□□ 0.34
CHRNA7-201ENST00000306901 AMOTL1Q8IY63 956 aa17.18■□□□□ 0.34
CHRNA7-201ENST00000306901 CTDP1Q9Y5B0 961 aaPredicted RBP17.18■□□□□ 0.34
CHRNA7-201ENST00000306901 CT47B1P0C2W7 299 aaPredicted RBP17.17■□□□□ 0.34
CHRNA7-201ENST00000306901 NEXNQ0ZGT2 675 aa17.17■□□□□ 0.34
CHRNA7-201ENST00000306901 NOL10Q9BSC4 688 aaKnown RBP17.17■□□□□ 0.34
CHRNA7-201ENST00000306901 SAFBQ15424 915 aaKnown RBP eCLIP17.17■□□□□ 0.34
CHRNA7-201ENST00000306901 COG3Q96JB2 828 aa17.17■□□□□ 0.34
CHRNA7-201ENST00000306901 IBSPP21815 317 aaPredicted RBP17.17■□□□□ 0.34
CHRNA7-201ENST00000306901 USP47Q96K76 1375 aa17.16■□□□□ 0.34
CHRNA7-201ENST00000306901 TEFQ10587 303 aa17.16■□□□□ 0.34
CHRNA7-201ENST00000306901 NEUROD6Q96NK8 337 aa17.16■□□□□ 0.34
CHRNA7-201ENST00000306901 WASHC4Q2M389 1173 aa17.16■□□□□ 0.34
CHRNA7-201ENST00000306901 VPS37DQ86XT2 251 aa17.15■□□□□ 0.34
CHRNA7-201ENST00000306901 CCDC43Q96MW1 224 aaKnown RBP17.15■□□□□ 0.34
CHRNA7-201ENST00000306901 C1orf115Q9H7X2 142 aa17.15■□□□□ 0.34
CHRNA7-201ENST00000306901 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.15■□□□□ 0.34
CHRNA7-201ENST00000306901 LRRFIP1Q32MZ4 808 aaKnown RBP17.15■□□□□ 0.34
CHRNA7-201ENST00000306901 GRPEL1Q9HAV7 217 aa17.15■□□□□ 0.34
CHRNA7-201ENST00000306901 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
CHRNA7-201ENST00000306901 CENPHQ9H3R5 247 aa17.15■□□□□ 0.34
CHRNA7-201ENST00000306901 HMOX1P09601 288 aa17.14■□□□□ 0.33
CHRNA7-201ENST00000306901 RB1CC1Q8TDY2 1594 aa17.14■□□□□ 0.33
CHRNA7-201ENST00000306901 API5Q9BZZ5 524 aaKnown RBP17.14■□□□□ 0.33
CHRNA7-201ENST00000306901 LETM1O95202 739 aaPredicted RBP17.14■□□□□ 0.33
CHRNA7-201ENST00000306901 NEK4P51957 841 aa17.13■□□□□ 0.33
CHRNA7-201ENST00000306901 MINK1Q8N4C8 1332 aaPredicted RBP17.13■□□□□ 0.33
CHRNA7-201ENST00000306901 AEBP1Q8IUX7 1158 aa17.13■□□□□ 0.33
CHRNA7-201ENST00000306901 KIAA0754O94854 1291 aa17.13■□□□□ 0.33
CHRNA7-201ENST00000306901 TTC5Q8N0Z6 440 aa17.13■□□□□ 0.33
CHRNA7-201ENST00000306901 AIMP1Q12904 312 aaKnown RBP17.12■□□□□ 0.33
CHRNA7-201ENST00000306901 CDCA7LQ96GN5 454 aa17.12■□□□□ 0.33
CHRNA7-201ENST00000306901 DIAPH1O60610 1272 aaKnown RBP17.12■□□□□ 0.33
CHRNA7-201ENST00000306901 STK3Q13188 491 aa17.12■□□□□ 0.33
CHRNA7-201ENST00000306901 CBX1P83916 185 aa17.12■□□□□ 0.33
CHRNA7-201ENST00000306901 RALYLQ86SE5 291 aaKnown RBP17.12■□□□□ 0.33
CHRNA7-201ENST00000306901 ZNF428Q96B54 188 aa17.12■□□□□ 0.33
CHRNA7-201ENST00000306901 ANKRD62A6NC57 917 aa17.11■□□□□ 0.33
CHRNA7-201ENST00000306901 KINO60870 393 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-201ENST00000306901 CCDC112Q8NEF3 446 aa17.11■□□□□ 0.33
CHRNA7-201ENST00000306901 PDZRN3Q9UPQ7 1066 aa17.11■□□□□ 0.33
CHRNA7-201ENST00000306901 MSH5O43196 834 aa17.11■□□□□ 0.33
CHRNA7-201ENST00000306901 SERPINC1P01008 464 aa17.11■□□□□ 0.33
CHRNA7-201ENST00000306901 NEFHP12036 1026 aa17.11■□□□□ 0.33
CHRNA7-201ENST00000306901 ERCC6Q03468 1493 aa17.11■□□□□ 0.33
CHRNA7-201ENST00000306901 HMGN5P82970 282 aaKnown RBP17.1■□□□□ 0.33
CHRNA7-201ENST00000306901 ERC2O15083 957 aa17.1■□□□□ 0.33
CHRNA7-201ENST00000306901 SMARCE1Q969G3 411 aa17.1■□□□□ 0.33
CHRNA7-201ENST00000306901 ROCK1Q13464 1354 aa17.09■□□□□ 0.33
CHRNA7-201ENST00000306901 MAP4K4O95819 1239 aaPredicted RBP17.09■□□□□ 0.33
CHRNA7-201ENST00000306901 TRERF1Q96PN7 1200 aa17.09■□□□□ 0.33
CHRNA7-201ENST00000306901 ENOX2Q16206 610 aaKnown RBP17.09■□□□□ 0.33
CHRNA7-201ENST00000306901 RUNDC1Q96C34 613 aa17.09■□□□□ 0.33
CHRNA7-201ENST00000306901 TSPYL4Q9UJ04 414 aa17.09■□□□□ 0.33
CHRNA7-201ENST00000306901 TAX1BP1Q86VP1 789 aa17.08■□□□□ 0.33
CHRNA7-201ENST00000306901 DNAJC2Q99543 621 aaKnown RBP17.08■□□□□ 0.33
CHRNA7-201ENST00000306901 WASHC2CQ9Y4E1 1318 aa17.08■□□□□ 0.32
CHRNA7-201ENST00000306901 FSD1Q9BTV5 496 aa17.08■□□□□ 0.32
CHRNA7-201ENST00000306901 MBD3O95983 291 aa17.07■□□□□ 0.32
CHRNA7-201ENST00000306901 MAGEC2Q9UBF1 373 aaPredicted RBP17.07■□□□□ 0.32
CHRNA7-201ENST00000306901 FILIP1LQ4L180 1135 aa17.07■□□□□ 0.32
CHRNA7-201ENST00000306901 SYTL4Q96C24 671 aaPredicted RBP17.07■□□□□ 0.32
CHRNA7-201ENST00000306901 MYO6Q9UM54 1294 aa17.07■□□□□ 0.32
CHRNA7-201ENST00000306901 CCP110O43303 1012 aa17.07■□□□□ 0.32
CHRNA7-201ENST00000306901 CNTROBQ8N137 903 aa17.07■□□□□ 0.32
CHRNA7-201ENST00000306901 BRMS1Q9HCU9 246 aa17.07■□□□□ 0.32
CHRNA7-201ENST00000306901 GOLGA6L10A6NI86 522 aa17.06■□□□□ 0.32
CHRNA7-201ENST00000306901 NINLQ9Y2I6 1382 aa17.06■□□□□ 0.32
CHRNA7-201ENST00000306901 CCDC144AA2RUR9 1427 aa17.06■□□□□ 0.32
CHRNA7-201ENST00000306901 PSMA5P28066 241 aa17.06■□□□□ 0.32
CHRNA7-201ENST00000306901 CCDC102AQ96A19 550 aa17.06■□□□□ 0.32
CHRNA7-201ENST00000306901 TNMDQ9H2S6 317 aa17.06■□□□□ 0.32
CHRNA7-201ENST00000306901 RRP9O43818 475 aaKnown RBP17.05■□□□□ 0.32
CHRNA7-201ENST00000306901 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
CHRNA7-201ENST00000306901 CCDC181Q5TID7 509 aa17.05■□□□□ 0.32
CHRNA7-201ENST00000306901 EVA1CP58658 441 aa17.04■□□□□ 0.32
CHRNA7-201ENST00000306901 EVC2Q86UK5 1308 aa17.04■□□□□ 0.32
CHRNA7-201ENST00000306901 RBM25P49756 843 aaKnown RBP17.04■□□□□ 0.32
CHRNA7-201ENST00000306901 FHOD3Q2V2M9 1422 aa17.04■□□□□ 0.32
CHRNA7-201ENST00000306901 STK38Q15208 465 aa17.03■□□□□ 0.32
CHRNA7-201ENST00000306901 RIC3Q7Z5B4 369 aa17.03■□□□□ 0.32
CHRNA7-201ENST00000306901 EID1Q9Y6B2 187 aa17.03■□□□□ 0.32
CHRNA7-201ENST00000306901 DDX58O95786 925 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms