RNA–Protein interactions for RNA: ENST00000306318.4

GBX2-201, Transcript of gastrulation brain homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2-201ENST00000306318 SETBP1Q9Y6X0 1596 aa29.64■■■□□ 2.34
GBX2-201ENST00000306318 EFCAB6Q5THR3 1501 aa29.64■■■□□ 2.34
GBX2-201ENST00000306318 RARSP54136 660 aaKnown RBP29.64■■■□□ 2.34
GBX2-201ENST00000306318 SEC24BO95487 1268 aa29.63■■■□□ 2.33
GBX2-201ENST00000306318 PMFBP1Q8TBY8 1022 aa29.63■■■□□ 2.33
GBX2-201ENST00000306318 NSD3Q9BZ95 1437 aa29.62■■■□□ 2.33
GBX2-201ENST00000306318 MROH2AA6NES4 1674 aa29.62■■■□□ 2.33
GBX2-201ENST00000306318 FANCAO15360 1455 aa29.61■■■□□ 2.33
GBX2-201ENST00000306318 BECN1Q14457 450 aa29.61■■■□□ 2.33
GBX2-201ENST00000306318 MORC1Q86VD1 984 aa29.61■■■□□ 2.33
GBX2-201ENST00000306318 WDR63Q8IWG1 891 aa29.6■■■□□ 2.33
GBX2-201ENST00000306318 TCP11L2Q8N4U5 519 aa29.57■■■□□ 2.32
GBX2-201ENST00000306318 USP32Q8NFA0 1604 aa29.57■■■□□ 2.32
GBX2-201ENST00000306318 CCDC27Q2M243 656 aa29.56■■■□□ 2.32
GBX2-201ENST00000306318 ADGRB3O60242 1522 aa29.56■■■□□ 2.32
GBX2-201ENST00000306318 ZC3H13Q5T200 1668 aaKnown RBP29.56■■■□□ 2.32
GBX2-201ENST00000306318 LMTK2Q8IWU2 1503 aa29.56■■■□□ 2.32
GBX2-201ENST00000306318 PCDHB15Q9Y5E8 787 aa29.55■■■□□ 2.32
GBX2-201ENST00000306318 PPRC1Q5VV67 1664 aaKnown RBP29.55■■■□□ 2.32
GBX2-201ENST00000306318 NOS1P29475 1434 aa29.54■■■□□ 2.32
GBX2-201ENST00000306318 NCBP3Q53F19 620 aaKnown RBP29.54■■■□□ 2.32
GBX2-201ENST00000306318 RRP7AQ9Y3A4 280 aaKnown RBP29.54■■■□□ 2.32
GBX2-201ENST00000306318 RLBP1P12271 317 aa29.53■■■□□ 2.32
GBX2-201ENST00000306318 NEUROD2Q15784 382 aa29.53■■■□□ 2.32
GBX2-201ENST00000306318 ADGRL1O94910 1474 aa29.53■■■□□ 2.32
GBX2-201ENST00000306318 ZNF518AQ6AHZ1 1483 aa29.53■■■□□ 2.32
GBX2-201ENST00000306318 SLC12A5Q9H2X9 1139 aa29.51■■■□□ 2.31
GBX2-201ENST00000306318 QRICH2Q9H0J4 1663 aa29.5■■■□□ 2.31
GBX2-201ENST00000306318 TBC1D32Q96NH3 1257 aa29.5■■■□□ 2.31
GBX2-201ENST00000306318 UPF2Q9HAU5 1272 aaKnown RBP29.49■■■□□ 2.31
GBX2-201ENST00000306318 PDZRN3Q9UPQ7 1066 aa29.49■■■□□ 2.31
GBX2-201ENST00000306318 ANTXR1Q9H6X2 564 aa29.48■■■□□ 2.31
GBX2-201ENST00000306318 C14orf93Q9H972 538 aaKnown RBP29.48■■■□□ 2.31
GBX2-201ENST00000306318 ADGRB1O14514 1584 aa29.48■■■□□ 2.31
GBX2-201ENST00000306318 TNNT2P45379 298 aaPredicted RBP29.48■■■□□ 2.31
GBX2-201ENST00000306318 TNNQ9UQP3 1299 aa29.48■■■□□ 2.31
GBX2-201ENST00000306318 RWDD1Q9H446 243 aaPredicted RBP29.47■■■□□ 2.31
GBX2-201ENST00000306318 CFAP53Q96M91 514 aa29.47■■■□□ 2.31
GBX2-201ENST00000306318 TRAK1Q9UPV9 953 aa29.47■■■□□ 2.31
GBX2-201ENST00000306318 MTHFSP49914 203 aa29.46■■■□□ 2.31
GBX2-201ENST00000306318 MYH16Q9H6N6 1097 aa29.45■■■□□ 2.3
GBX2-201ENST00000306318 PPLO60437 1756 aa29.44■■■□□ 2.3
GBX2-201ENST00000306318 ASXL2Q76L83 1435 aa29.44■■■□□ 2.3
GBX2-201ENST00000306318 KIDINS220Q9ULH0 1771 aa29.43■■■□□ 2.3
GBX2-201ENST00000306318 BCL2L13Q9BXK5 485 aa29.42■■■□□ 2.3
GBX2-201ENST00000306318 SLKQ9H2G2 1235 aaPredicted RBP29.42■■■□□ 2.3
GBX2-201ENST00000306318 POGKQ9P215 609 aa29.42■■■□□ 2.3
GBX2-201ENST00000306318 PUS7Q96PZ0 661 aaKnown RBP29.41■■■□□ 2.3
GBX2-201ENST00000306318 MVPQ14764 893 aaKnown RBP29.41■■■□□ 2.3
GBX2-201ENST00000306318 ADGRB2O60241 1585 aa29.41■■■□□ 2.3
GBX2-201ENST00000306318 NSD2O96028 1365 aa29.4■■■□□ 2.3
GBX2-201ENST00000306318 NPM1P06748 294 aaKnown RBP eCLIP29.39■■■□□ 2.3
GBX2-201ENST00000306318 FAM43AQ8N2R8 423 aa29.39■■■□□ 2.3
GBX2-201ENST00000306318 TBC1D2Q9BYX2 928 aa29.39■■■□□ 2.3
GBX2-201ENST00000306318 CT47B1P0C2W7 299 aaPredicted RBP29.38■■■□□ 2.29
GBX2-201ENST00000306318 RPGRIP1LQ68CZ1 1315 aa29.36■■■□□ 2.29
GBX2-201ENST00000306318 CHGAP10645 457 aaKnown RBP29.36■■■□□ 2.29
GBX2-201ENST00000306318 ZKSCAN2Q63HK3 967 aa29.36■■■□□ 2.29
GBX2-201ENST00000306318 NPATQ14207 1427 aa29.35■■■□□ 2.29
GBX2-201ENST00000306318 ANKRD36BQ8N2N9 1353 aa29.35■■■□□ 2.29
GBX2-201ENST00000306318 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.34■■■□□ 2.29
GBX2-201ENST00000306318 TMEM132EQ6IEE7 984 aa29.33■■■□□ 2.29
GBX2-201ENST00000306318 DZIP1LQ8IYY4 767 aaKnown RBP29.33■■■□□ 2.29
GBX2-201ENST00000306318 U2AF1L5P0DN76 240 aaPredicted RBP29.32■■■□□ 2.28
GBX2-201ENST00000306318 U2AF1Q01081 240 aaKnown RBP eCLIP29.32■■■□□ 2.28
GBX2-201ENST00000306318 EVC2Q86UK5 1308 aa29.31■■■□□ 2.28
GBX2-201ENST00000306318 TULP4Q9NRJ4 1543 aa29.31■■■□□ 2.28
GBX2-201ENST00000306318 L1TD1Q5T7N2 865 aaKnown RBP29.3■■■□□ 2.28
GBX2-201ENST00000306318 FTSJ3Q8IY81 847 aaKnown RBP29.3■■■□□ 2.28
GBX2-201ENST00000306318 GLI2P10070 1586 aa29.29■■■□□ 2.28
GBX2-201ENST00000306318 HDAC1Q13547 482 aaPredicted RBP29.28■■■□□ 2.28
GBX2-201ENST00000306318 ARHGEF28Q8N1W1 1705 aaKnown RBP29.26■■■□□ 2.27
GBX2-201ENST00000306318 PRKCSHP14314 528 aaPredicted RBP29.26■■■□□ 2.27
GBX2-201ENST00000306318 PLEKHF1Q96S99 279 aa29.24■■■□□ 2.27
GBX2-201ENST00000306318 TSR2Q969E8 191 aaKnown RBP29.23■■■□□ 2.27
GBX2-201ENST00000306318 C22orf23Q9BZE7 217 aa29.23■■■□□ 2.27
GBX2-201ENST00000306318 SMC4Q9NTJ3 1288 aa29.23■■■□□ 2.27
GBX2-201ENST00000306318 TRIM27P14373 513 aa29.23■■■□□ 2.27
GBX2-201ENST00000306318 DDX19BQ9UMR2 479 aa29.23■■■□□ 2.27
GBX2-201ENST00000306318 CD109Q6YHK3 1445 aa29.23■■■□□ 2.27
GBX2-201ENST00000306318 FRMPD1Q5SYB0 1578 aa29.23■■■□□ 2.27
GBX2-201ENST00000306318 HECW2Q9P2P5 1572 aa29.23■■■□□ 2.27
GBX2-201ENST00000306318 EXOSC9Q06265 439 aaKnown RBP29.21■■■□□ 2.27
GBX2-201ENST00000306318 ABCC11Q96J66 1382 aa29.2■■■□□ 2.27
GBX2-201ENST00000306318 IL16Q14005 1332 aa29.2■■■□□ 2.26
GBX2-201ENST00000306318 MCM4P33991 863 aa29.2■■■□□ 2.26
GBX2-201ENST00000306318 TMPOP42166 694 aaKnown RBP29.2■■■□□ 2.26
GBX2-201ENST00000306318 COL3A1P02461 1466 aaPredicted RBP29.19■■■□□ 2.26
GBX2-201ENST00000306318 ATF7IPQ6VMQ6 1270 aa29.19■■■□□ 2.26
GBX2-201ENST00000306318 SMC5Q8IY18 1101 aa29.19■■■□□ 2.26
GBX2-201ENST00000306318 SSH1Q8WYL5 1049 aa29.19■■■□□ 2.26
GBX2-201ENST00000306318 TRIM35Q9UPQ4 493 aa29.19■■■□□ 2.26
GBX2-201ENST00000306318 CFAP65Q6ZU64 1925 aaKnown RBP29.18■■■□□ 2.26
GBX2-201ENST00000306318 ABCC3O15438 1527 aa29.18■■■□□ 2.26
GBX2-201ENST00000306318 CHMP5Q9NZZ3 219 aa29.18■■■□□ 2.26
GBX2-201ENST00000306318 RSPH6AQ9H0K4 717 aa29.17■■■□□ 2.26
GBX2-201ENST00000306318 MLH3Q9UHC1 1453 aa29.17■■■□□ 2.26
GBX2-201ENST00000306318 MFAP1P55081 439 aaKnown RBP29.17■■■□□ 2.26
GBX2-201ENST00000306318 VGFO15240 615 aaPredicted RBP29.16■■■□□ 2.26
GBX2-201ENST00000306318 CABP2Q9NPB3 220 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms