RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 AFF2P51816 1311 aa30.45■■■□□ 2.46
RER1-201ENST00000306256 LRPPRCP42704 1394 aaKnown RBP30.44■■■□□ 2.46
RER1-201ENST00000306256 RAB3GAP2Q9H2M9 1393 aa30.43■■■□□ 2.46
RER1-201ENST00000306256 WAPLQ7Z5K2 1190 aa30.43■■■□□ 2.46
RER1-201ENST00000306256 SOS2Q07890 1332 aaPredicted RBP30.43■■■□□ 2.46
RER1-201ENST00000306256 C8orf37Q96NL8 207 aa30.41■■■□□ 2.46
RER1-201ENST00000306256 PLEKHH1Q9ULM0 1364 aa30.41■■■□□ 2.46
RER1-201ENST00000306256 ACIN1Q9UKV3 1341 aaKnown RBP30.4■■■□□ 2.46
RER1-201ENST00000306256 ABCC11Q96J66 1382 aa30.39■■■□□ 2.45
RER1-201ENST00000306256 YTHDC2Q9H6S0 1430 aaKnown RBP30.38■■■□□ 2.45
RER1-201ENST00000306256 RXRBP28702 533 aa30.37■■■□□ 2.45
RER1-201ENST00000306256 ESCO1Q5FWF5 840 aa30.37■■■□□ 2.45
RER1-201ENST00000306256 NUTM2FA1L443 756 aa30.36■■■□□ 2.45
RER1-201ENST00000306256 ADAMTS2O95450 1211 aa30.36■■■□□ 2.45
RER1-201ENST00000306256 FMN2Q9NZ56 1722 aa30.36■■■□□ 2.45
RER1-201ENST00000306256 NRXN1Q9ULB1 1477 aa30.35■■■□□ 2.45
RER1-201ENST00000306256 MYOM2P54296 1465 aa30.34■■■□□ 2.45
RER1-201ENST00000306256 COL22A1Q8NFW1 1626 aaPredicted RBP30.33■■■□□ 2.45
RER1-201ENST00000306256 PXDNQ92626 1479 aa30.32■■■□□ 2.44
RER1-201ENST00000306256 NPHP3Q7Z494 1330 aa30.31■■■□□ 2.44
RER1-201ENST00000306256 XPCQ01831 940 aaPredicted RBP30.31■■■□□ 2.44
RER1-201ENST00000306256 C14orf93Q9H972 538 aaKnown RBP30.31■■■□□ 2.44
RER1-201ENST00000306256 CDK12Q9NYV4 1490 aaPredicted RBP30.31■■■□□ 2.44
RER1-201ENST00000306256 RGPD8O14715 1765 aaPredicted RBP30.31■■■□□ 2.44
RER1-201ENST00000306256 CFAP70Q5T0N1 1121 aa30.3■■■□□ 2.44
RER1-201ENST00000306256 NGLY1Q96IV0 654 aa30.29■■■□□ 2.44
RER1-201ENST00000306256 FOXO3O43524 673 aa30.28■■■□□ 2.44
RER1-201ENST00000306256 QTRT2Q9H974 415 aaKnown RBP30.27■■■□□ 2.44
RER1-201ENST00000306256 MARF1Q9Y4F3 1742 aaKnown RBP30.25■■■□□ 2.43
RER1-201ENST00000306256 KIF1AQ12756 1690 aa30.25■■■□□ 2.43
RER1-201ENST00000306256 UPF1Q92900 1129 aaKnown RBP eCLIP30.24■■■□□ 2.43
RER1-201ENST00000306256 DHX57Q6P158 1386 aaKnown RBP30.24■■■□□ 2.43
RER1-201ENST00000306256 RGS12O14924 1447 aa30.23■■■□□ 2.43
RER1-201ENST00000306256 RBM6P78332 1123 aaKnown RBP30.22■■■□□ 2.43
RER1-201ENST00000306256 SIRT1Q96EB6 747 aa30.21■■■□□ 2.43
RER1-201ENST00000306256 SAFB2Q14151 953 aaKnown RBP eCLIP30.2■■■□□ 2.43
RER1-201ENST00000306256 PRAM1Q96QH2 718 aa30.18■■■□□ 2.42
RER1-201ENST00000306256 USP21Q9UK80 565 aa30.18■■■□□ 2.42
RER1-201ENST00000306256 ADGRB1O14514 1584 aa30.17■■■□□ 2.42
RER1-201ENST00000306256 DLC1Q96QB1 1528 aa30.17■■■□□ 2.42
RER1-201ENST00000306256 FNBP4Q8N3X1 1017 aaPredicted RBP30.14■■■□□ 2.42
RER1-201ENST00000306256 KDM2AQ9Y2K7 1162 aa30.14■■■□□ 2.42
RER1-201ENST00000306256 TRPC5Q9UL62 973 aaPredicted RBP30.12■■■□□ 2.41
RER1-201ENST00000306256 SPATA31A3Q5VYP0 1347 aa30.12■■■□□ 2.41
RER1-201ENST00000306256 USP32Q8NFA0 1604 aa30.11■■■□□ 2.41
RER1-201ENST00000306256 POGKQ9P215 609 aa30.11■■■□□ 2.41
RER1-201ENST00000306256 ATRNO75882 1429 aa30.11■■■□□ 2.41
RER1-201ENST00000306256 KRT28Q7Z3Y7 464 aa30.1■■■□□ 2.41
RER1-201ENST00000306256 DCAF11Q8TEB1 546 aa30.1■■■□□ 2.41
RER1-201ENST00000306256 PHF8Q9UPP1 1060 aa30.1■■■□□ 2.41
RER1-201ENST00000306256 ADGRB2O60241 1585 aa30.1■■■□□ 2.41
RER1-201ENST00000306256 TRAK1Q9UPV9 953 aa30.08■■■□□ 2.41
RER1-201ENST00000306256 BCL9LQ86UU0 1499 aa30.07■■■□□ 2.4
RER1-201ENST00000306256 HRCP23327 699 aa30.06■■■□□ 2.4
RER1-201ENST00000306256 TNS3Q68CZ2 1445 aa30.05■■■□□ 2.4
RER1-201ENST00000306256 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.05■■■□□ 2.4
RER1-201ENST00000306256 HIRIP3Q9BW71 556 aaPredicted RBP30.04■■■□□ 2.4
RER1-201ENST00000306256 ABCA3Q99758 1704 aa30.03■■■□□ 2.4
RER1-201ENST00000306256 ANKARQ7Z5J8 1434 aa30.03■■■□□ 2.4
RER1-201ENST00000306256 MINK1Q8N4C8 1332 aaPredicted RBP30.02■■■□□ 2.4
RER1-201ENST00000306256 ARHGEF28Q8N1W1 1705 aaKnown RBP30.02■■■□□ 2.4
RER1-201ENST00000306256 PLEKHG5O94827 1062 aa30.01■■■□□ 2.39
RER1-201ENST00000306256 PMFBP1Q8TBY8 1022 aa30.01■■■□□ 2.39
RER1-201ENST00000306256 PSME1Q06323 249 aa30■■■□□ 2.39
RER1-201ENST00000306256 CABLES1Q8TDN4 633 aa29.98■■■□□ 2.39
RER1-201ENST00000306256 SBNO1A3KN83 1393 aa29.98■■■□□ 2.39
RER1-201ENST00000306256 SLIT2O94813 1529 aa29.97■■■□□ 2.39
RER1-201ENST00000306256 TRPM3Q9HCF6 1732 aaPredicted RBP29.97■■■□□ 2.39
RER1-201ENST00000306256 LMOD2Q6P5Q4 547 aa29.97■■■□□ 2.39
RER1-201ENST00000306256 ATAD2Q6PL18 1390 aa29.97■■■□□ 2.39
RER1-201ENST00000306256 PLCH1Q4KWH8 1693 aa29.96■■■□□ 2.39
RER1-201ENST00000306256 HAP1P54257 671 aaPredicted RBP29.96■■■□□ 2.39
RER1-201ENST00000306256 TULP4Q9NRJ4 1543 aa29.96■■■□□ 2.39
RER1-201ENST00000306256 PRR36Q9H6K5 1346 aa29.96■■■□□ 2.39
RER1-201ENST00000306256 STAC3Q96MF2 364 aa29.95■■■□□ 2.39
RER1-201ENST00000306256 GJD4Q96KN9 370 aaPredicted RBP29.94■■■□□ 2.38
RER1-201ENST00000306256 GLI3P10071 1580 aa29.94■■■□□ 2.38
RER1-201ENST00000306256 UNC5CLQ8IV45 518 aa29.93■■■□□ 2.38
RER1-201ENST00000306256 ARHGEF10O15013 1369 aa29.92■■■□□ 2.38
RER1-201ENST00000306256 EIF3AQ14152 1382 aaKnown RBP29.91■■■□□ 2.38
RER1-201ENST00000306256 RALGAPBQ86X10 1494 aa29.91■■■□□ 2.38
RER1-201ENST00000306256 ALS2Q96Q42 1657 aa29.91■■■□□ 2.38
RER1-201ENST00000306256 NWD2Q9ULI1 1742 aa29.91■■■□□ 2.38
RER1-201ENST00000306256 WASLO00401 505 aaPredicted RBP29.9■■■□□ 2.38
RER1-201ENST00000306256 ITSN1Q15811 1721 aa29.89■■■□□ 2.38
RER1-201ENST00000306256 BRWD3Q6RI45 1802 aa29.89■■■□□ 2.38
RER1-201ENST00000306256 KIAA1210Q9ULL0 1709 aa29.88■■■□□ 2.37
RER1-201ENST00000306256 GPRASP1Q5JY77 1395 aa29.86■■■□□ 2.37
RER1-201ENST00000306256 ATP7BP35670 1465 aa29.83■■■□□ 2.37
RER1-201ENST00000306256 CRYBG1Q9Y4K1 1723 aa29.82■■■□□ 2.36
RER1-201ENST00000306256 NGDNQ8NEJ9 315 aaKnown RBP29.81■■■□□ 2.36
RER1-201ENST00000306256 NRAPQ86VF7 1730 aa29.81■■■□□ 2.36
RER1-201ENST00000306256 EP400Q96L91 3159 aa29.79■■■□□ 2.36
RER1-201ENST00000306256 FAM83GA6ND36 823 aa29.79■■■□□ 2.36
RER1-201ENST00000306256 VPS72Q15906 364 aa29.79■■■□□ 2.36
RER1-201ENST00000306256 TOPAZ1Q8N9V7 1692 aa29.78■■■□□ 2.36
RER1-201ENST00000306256 NUDT16Q96DE0 195 aaKnown RBP29.77■■■□□ 2.36
RER1-201ENST00000306256 CCDC9Q9Y3X0 531 aaKnown RBP29.77■■■□□ 2.36
RER1-201ENST00000306256 COL14A1Q05707 1796 aaKnown RBP29.77■■■□□ 2.36
RER1-201ENST00000306256 PAK3O75914 559 aaPredicted RBP29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms