RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 WDR63Q8IWG1 891 aa16.41■□□□□ 0.22
DDX54-201ENST00000306014 COG3Q96JB2 828 aa16.41■□□□□ 0.22
DDX54-201ENST00000306014 API5Q9BZZ5 524 aaKnown RBP16.41■□□□□ 0.22
DDX54-201ENST00000306014 GPATCH8Q9UKJ3 1502 aaKnown RBP16.41■□□□□ 0.22
DDX54-201ENST00000306014 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
DDX54-201ENST00000306014 DRC7Q8IY82 874 aa16.4■□□□□ 0.22
DDX54-201ENST00000306014 TCOF1Q13428 1488 aaKnown RBP16.4■□□□□ 0.22
DDX54-201ENST00000306014 KIF14Q15058 1648 aa16.4■□□□□ 0.22
DDX54-201ENST00000306014 C1orf115Q9H7X2 142 aa16.4■□□□□ 0.22
DDX54-201ENST00000306014 NUP153P49790 1475 aaKnown RBP16.39■□□□□ 0.22
DDX54-201ENST00000306014 FAM43AQ8N2R8 423 aa16.39■□□□□ 0.21
DDX54-201ENST00000306014 RAPGEF6Q8TEU7 1601 aa16.39■□□□□ 0.21
DDX54-201ENST00000306014 RALGAPBQ86X10 1494 aa16.38■□□□□ 0.21
DDX54-201ENST00000306014 NINLQ9Y2I6 1382 aa16.38■□□□□ 0.21
DDX54-201ENST00000306014 KIAA0556O60303 1618 aa16.38■□□□□ 0.21
DDX54-201ENST00000306014 GNAI1P63096 354 aa16.38■□□□□ 0.21
DDX54-201ENST00000306014 MCTP1Q6DN14 999 aa16.38■□□□□ 0.21
DDX54-201ENST00000306014 ATF7IPQ6VMQ6 1270 aa16.38■□□□□ 0.21
DDX54-201ENST00000306014 VSIG10Q8N0Z9 540 aa16.38■□□□□ 0.21
DDX54-201ENST00000306014 NKTRP30414 1462 aaKnown RBP16.37■□□□□ 0.21
DDX54-201ENST00000306014 IGHDP01880 384 aa16.37■□□□□ 0.21
DDX54-201ENST00000306014 RARSP54136 660 aaKnown RBP16.37■□□□□ 0.21
DDX54-201ENST00000306014 REC8O95072 547 aa16.37■□□□□ 0.21
DDX54-201ENST00000306014 LRPPRCP42704 1394 aaKnown RBP16.37■□□□□ 0.21
DDX54-201ENST00000306014 PARD3Q8TEW0 1356 aa16.37■□□□□ 0.21
DDX54-201ENST00000306014 PRKAR2BP31323 418 aa16.36■□□□□ 0.21
DDX54-201ENST00000306014 MCM4P33991 863 aa16.36■□□□□ 0.21
DDX54-201ENST00000306014 AMPHP49418 695 aa16.35■□□□□ 0.21
DDX54-201ENST00000306014 LTV1Q96GA3 475 aaPredicted RBP16.35■□□□□ 0.21
DDX54-201ENST00000306014 CDC45O75419 566 aa16.35■□□□□ 0.21
DDX54-201ENST00000306014 ADGRL1O94910 1474 aa16.34■□□□□ 0.21
DDX54-201ENST00000306014 NSD3Q9BZ95 1437 aa16.34■□□□□ 0.21
DDX54-201ENST00000306014 INTS3Q68E01 1043 aaKnown RBP16.34■□□□□ 0.21
DDX54-201ENST00000306014 NUCB2P80303 420 aa16.33■□□□□ 0.21
DDX54-201ENST00000306014 DISP1Q96F81 1524 aa16.33■□□□□ 0.2
DDX54-201ENST00000306014 NGDNQ8NEJ9 315 aaKnown RBP16.33■□□□□ 0.2
DDX54-201ENST00000306014 NASPP49321 788 aaPredicted RBP16.33■□□□□ 0.2
DDX54-201ENST00000306014 NECTIN2Q92692 538 aa16.33■□□□□ 0.2
DDX54-201ENST00000306014 RNF123Q5XPI4 1314 aa16.32■□□□□ 0.2
DDX54-201ENST00000306014 ASXL2Q76L83 1435 aa16.32■□□□□ 0.2
DDX54-201ENST00000306014 A0A0G2JS52 829 aa16.31■□□□□ 0.2
DDX54-201ENST00000306014 ANO2Q9NQ90 1003 aa16.31■□□□□ 0.2
DDX54-201ENST00000306014 TEX14Q8IWB6 1497 aa16.31■□□□□ 0.2
DDX54-201ENST00000306014 PER1O15534 1290 aaPredicted RBP16.31■□□□□ 0.2
DDX54-201ENST00000306014 PHF14O94880 888 aa16.31■□□□□ 0.2
DDX54-201ENST00000306014 TBC1D2Q9BYX2 928 aa16.31■□□□□ 0.2
DDX54-201ENST00000306014 C8orf34Q49A92 452 aa16.31■□□□□ 0.2
DDX54-201ENST00000306014 TESK2Q96S53 571 aa16.31■□□□□ 0.2
DDX54-201ENST00000306014 AMER1Q5JTC6 1135 aaPredicted RBP16.31■□□□□ 0.2
DDX54-201ENST00000306014 FANCAO15360 1455 aa16.3■□□□□ 0.2
DDX54-201ENST00000306014 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
DDX54-201ENST00000306014 PRAM1Q96QH2 718 aa16.3■□□□□ 0.2
DDX54-201ENST00000306014 CT47B1P0C2W7 299 aaPredicted RBP16.29■□□□□ 0.2
DDX54-201ENST00000306014 PZPP20742 1482 aa16.29■□□□□ 0.2
DDX54-201ENST00000306014 CAVIN1Q6NZI2 390 aaKnown RBP16.29■□□□□ 0.2
DDX54-201ENST00000306014 CHD1LQ86WJ1 897 aa16.29■□□□□ 0.2
DDX54-201ENST00000306014 GOLGA6L6A8MZA4 724 aa16.29■□□□□ 0.2
DDX54-201ENST00000306014 TWISTNBQ3B726 338 aaPredicted RBP16.29■□□□□ 0.2
DDX54-201ENST00000306014 SSH1Q8WYL5 1049 aa16.29■□□□□ 0.2
DDX54-201ENST00000306014 ADGRF5Q8IZF2 1346 aa16.29■□□□□ 0.2
DDX54-201ENST00000306014 TMPOP42166 694 aaKnown RBP16.29■□□□□ 0.2
DDX54-201ENST00000306014 GCC1Q96CN9 775 aa16.29■□□□□ 0.2
DDX54-201ENST00000306014 GRPEL1Q9HAV7 217 aa16.29■□□□□ 0.2
DDX54-201ENST00000306014 PRAG1Q86YV5 1406 aa16.28■□□□□ 0.2
DDX54-201ENST00000306014 FAM13BQ9NYF5 915 aa16.28■□□□□ 0.2
DDX54-201ENST00000306014 PLEKHH1Q9ULM0 1364 aa16.27■□□□□ 0.2
DDX54-201ENST00000306014 FKBP5Q13451 457 aaPredicted RBP16.27■□□□□ 0.19
DDX54-201ENST00000306014 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.26■□□□□ 0.19
DDX54-201ENST00000306014 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
DDX54-201ENST00000306014 RNF214Q8ND24 703 aa16.26■□□□□ 0.19
DDX54-201ENST00000306014 CABP1Q9NZU7 370 aa16.26■□□□□ 0.19
DDX54-201ENST00000306014 NRDCO43847 1150 aa16.25■□□□□ 0.19
DDX54-201ENST00000306014 PLCH2O75038 1416 aa16.25■□□□□ 0.19
DDX54-201ENST00000306014 GPATCH3Q96I76 525 aa16.25■□□□□ 0.19
DDX54-201ENST00000306014 SPATA31E1Q6ZUB1 1445 aa16.25■□□□□ 0.19
DDX54-201ENST00000306014 K7ELQ4 463 aaPredicted RBP16.25■□□□□ 0.19
DDX54-201ENST00000306014 PCDHB15Q9Y5E8 787 aa16.24■□□□□ 0.19
DDX54-201ENST00000306014 PRPF40AO75400 957 aaKnown RBP16.24■□□□□ 0.19
DDX54-201ENST00000306014 CSPP1Q1MSJ5 1256 aa16.24■□□□□ 0.19
DDX54-201ENST00000306014 SCAF11Q99590 1463 aaKnown RBP16.24■□□□□ 0.19
DDX54-201ENST00000306014 SLC52A1Q9NWF4 448 aa16.24■□□□□ 0.19
DDX54-201ENST00000306014 WDR7Q9Y4E6 1490 aa16.24■□□□□ 0.19
DDX54-201ENST00000306014 RABEP1Q15276 862 aa16.24■□□□□ 0.19
DDX54-201ENST00000306014 THUMPD2Q9BTF0 503 aaKnown RBP16.24■□□□□ 0.19
DDX54-201ENST00000306014 TSPYL4Q9UJ04 414 aa16.24■□□□□ 0.19
DDX54-201ENST00000306014 DENND4BO75064 1496 aaPredicted RBP16.23■□□□□ 0.19
DDX54-201ENST00000306014 EIF2S2P20042 333 aaKnown RBP16.23■□□□□ 0.19
DDX54-201ENST00000306014 NEK4P51957 841 aa16.23■□□□□ 0.19
DDX54-201ENST00000306014 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.23■□□□□ 0.19
DDX54-201ENST00000306014 TRIM27P14373 513 aa16.22■□□□□ 0.19
DDX54-201ENST00000306014 TBC1D32Q96NH3 1257 aa16.22■□□□□ 0.19
DDX54-201ENST00000306014 SPINK5Q9NQ38 1064 aaPredicted RBP16.22■□□□□ 0.19
DDX54-201ENST00000306014 MAGI3Q5TCQ9 1506 aa16.22■□□□□ 0.19
DDX54-201ENST00000306014 ABCC2Q92887 1545 aa16.22■□□□□ 0.19
DDX54-201ENST00000306014 R3HCC1Q9Y3T6 440 aaKnown RBP16.22■□□□□ 0.19
DDX54-201ENST00000306014 ESPNB1AK53 854 aa16.21■□□□□ 0.19
DDX54-201ENST00000306014 CHMP4AQ9BY43 222 aa16.21■□□□□ 0.19
DDX54-201ENST00000306014 CDK19Q9BWU1 502 aa16.21■□□□□ 0.19
DDX54-201ENST00000306014 CHMP3Q9Y3E7 222 aa16.21■□□□□ 0.19
DDX54-201ENST00000306014 ATP6V1DQ9Y5K8 247 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms