RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 RIMBP3Q9UFD9 1639 aa7.24□□□□□ -1.25
VPS50-202ENST00000305866 SENP3-EIF4A1A0A087X0R7 540 aa7.24□□□□□ -1.25
VPS50-202ENST00000305866 PPP2R1AP30153 589 aa7.24□□□□□ -1.25
VPS50-202ENST00000305866 CD163L1Q9NR16 1453 aa7.24□□□□□ -1.25
VPS50-202ENST00000305866 SPATA31D1Q6ZQQ2 1576 aa7.23□□□□□ -1.25
VPS50-202ENST00000305866 SEC24BO95487 1268 aa7.23□□□□□ -1.25
VPS50-202ENST00000305866 NFKBIBQ15653 356 aa7.23□□□□□ -1.25
VPS50-202ENST00000305866 ARHGEF40Q8TER5 1519 aa7.23□□□□□ -1.25
VPS50-202ENST00000305866 SPAG9O60271 1321 aaKnown RBP7.23□□□□□ -1.25
VPS50-202ENST00000305866 ZNF777Q9ULD5 760 aaPredicted RBP7.23□□□□□ -1.25
VPS50-202ENST00000305866 IGHDP01880 384 aa7.22□□□□□ -1.25
VPS50-202ENST00000305866 NINLQ9Y2I6 1382 aa7.22□□□□□ -1.25
VPS50-202ENST00000305866 ARID3CA6NKF2 412 aa7.22□□□□□ -1.25
VPS50-202ENST00000305866 TMF1P82094 1093 aa7.22□□□□□ -1.25
VPS50-202ENST00000305866 ZNF692Q9BU19 519 aaPredicted RBP7.22□□□□□ -1.25
VPS50-202ENST00000305866 CARD14Q9BXL6 1004 aa7.22□□□□□ -1.25
VPS50-202ENST00000305866 PANK3Q9H999 370 aa7.22□□□□□ -1.25
VPS50-202ENST00000305866 NSD2O96028 1365 aa7.22□□□□□ -1.25
VPS50-202ENST00000305866 USP54Q70EL1 1684 aa7.22□□□□□ -1.25
VPS50-202ENST00000305866 CDCA8Q53HL2 280 aa7.21□□□□□ -1.25
VPS50-202ENST00000305866 ZBTB47Q9UFB7 747 aaPredicted RBP7.21□□□□□ -1.25
VPS50-202ENST00000305866 BRPF3Q9ULD4 1205 aa7.21□□□□□ -1.25
VPS50-202ENST00000305866 YEATS2Q9ULM3 1422 aa7.21□□□□□ -1.26
VPS50-202ENST00000305866 RGPD1P0DJD0 1748 aa7.21□□□□□ -1.26
VPS50-202ENST00000305866 NRXN3Q9Y4C0 1643 aa7.21□□□□□ -1.26
VPS50-202ENST00000305866 TMC1Q8TDI8 760 aa7.21□□□□□ -1.26
VPS50-202ENST00000305866 PTPRMP28827 1452 aa7.21□□□□□ -1.26
VPS50-202ENST00000305866 RIMS1Q86UR5 1692 aaKnown RBP7.2□□□□□ -1.26
VPS50-202ENST00000305866 DIP2BQ9P265 1576 aa7.2□□□□□ -1.26
VPS50-202ENST00000305866 FRAT1Q92837 279 aaPredicted RBP7.2□□□□□ -1.26
VPS50-202ENST00000305866 CD109Q6YHK3 1445 aa7.2□□□□□ -1.26
VPS50-202ENST00000305866 FSD2A1L4K1 749 aa7.2□□□□□ -1.26
VPS50-202ENST00000305866 CENPQQ7L2Z9 268 aaPredicted RBP7.2□□□□□ -1.26
VPS50-202ENST00000305866 AKAP12Q02952 1782 aa7.2□□□□□ -1.26
VPS50-202ENST00000305866 ANP32AP39687 249 aaKnown RBP7.19□□□□□ -1.26
VPS50-202ENST00000305866 FBLN2P98095 1184 aa7.19□□□□□ -1.26
VPS50-202ENST00000305866 NRKQ7Z2Y5 1582 aa7.19□□□□□ -1.26
VPS50-202ENST00000305866 GSE1Q14687 1217 aa7.19□□□□□ -1.26
VPS50-202ENST00000305866 MARF1Q9Y4F3 1742 aaKnown RBP7.19□□□□□ -1.26
VPS50-202ENST00000305866 C14orf93Q9H972 538 aaKnown RBP7.19□□□□□ -1.26
VPS50-202ENST00000305866 MON2Q7Z3U7 1717 aa7.19□□□□□ -1.26
VPS50-202ENST00000305866 TOPAZ1Q8N9V7 1692 aa7.18□□□□□ -1.26
VPS50-202ENST00000305866 NALCNQ8IZF0 1738 aa7.18□□□□□ -1.26
VPS50-202ENST00000305866 LRRC7Q96NW7 1537 aa7.17□□□□□ -1.26
VPS50-202ENST00000305866 FAM161AQ3B820 660 aa7.17□□□□□ -1.26
VPS50-202ENST00000305866 CRYBG1Q9Y4K1 1723 aa7.17□□□□□ -1.26
VPS50-202ENST00000305866 CCDC27Q2M243 656 aa7.17□□□□□ -1.26
VPS50-202ENST00000305866 LAS1LQ9Y4W2 734 aaKnown RBP7.17□□□□□ -1.26
VPS50-202ENST00000305866 MAP2P11137 1827 aaKnown RBP7.17□□□□□ -1.26
VPS50-202ENST00000305866 NEFMP07197 916 aa7.16□□□□□ -1.26
VPS50-202ENST00000305866 UBE2Q2Q8WVN8 375 aa7.16□□□□□ -1.26
VPS50-202ENST00000305866 FRAT2O75474 233 aaPredicted RBP7.16□□□□□ -1.26
VPS50-202ENST00000305866 AAMPQ13685 434 aa7.16□□□□□ -1.26
VPS50-202ENST00000305866 C3P01024 1663 aa7.16□□□□□ -1.26
VPS50-202ENST00000305866 CPS1P31327 1500 aa7.15□□□□□ -1.26
VPS50-202ENST00000305866 AK9Q5TCS8 1911 aa7.15□□□□□ -1.26
VPS50-202ENST00000305866 SLC4A3P48751 1232 aa7.15□□□□□ -1.26
VPS50-202ENST00000305866 RRAGDQ9NQL2 400 aaPredicted RBP7.15□□□□□ -1.26
VPS50-202ENST00000305866 PPP6R1Q9UPN7 881 aa7.15□□□□□ -1.26
VPS50-202ENST00000305866 PNPLA6Q8IY17 1366 aa7.15□□□□□ -1.26
VPS50-202ENST00000305866 BCAR3O75815 825 aa7.15□□□□□ -1.26
VPS50-202ENST00000305866 AFAP1Q8N556 730 aa7.15□□□□□ -1.26
VPS50-202ENST00000305866 ALKQ9UM73 1620 aa7.15□□□□□ -1.26
VPS50-202ENST00000305866 RLBP1P12271 317 aa7.15□□□□□ -1.27
VPS50-202ENST00000305866 TECPR2O15040 1411 aa7.15□□□□□ -1.27
VPS50-202ENST00000305866 PPIP5K1Q6PFW1 1433 aa7.14□□□□□ -1.27
VPS50-202ENST00000305866 PPM1GO15355 546 aaPredicted RBP7.14□□□□□ -1.27
VPS50-202ENST00000305866 TNNQ9UQP3 1299 aa7.14□□□□□ -1.27
VPS50-202ENST00000305866 ANKRD36BQ8N2N9 1353 aa7.14□□□□□ -1.27
VPS50-202ENST00000305866 ABCC11Q96J66 1382 aa7.14□□□□□ -1.27
VPS50-202ENST00000305866 CC2D1BQ5T0F9 858 aaKnown RBP7.13□□□□□ -1.27
VPS50-202ENST00000305866 ADGRF5Q8IZF2 1346 aa7.13□□□□□ -1.27
VPS50-202ENST00000305866 LRRC37A3O60309 1634 aa7.13□□□□□ -1.27
VPS50-202ENST00000305866 PCDHB15Q9Y5E8 787 aa7.13□□□□□ -1.27
VPS50-202ENST00000305866 ATP7BP35670 1465 aa7.13□□□□□ -1.27
VPS50-202ENST00000305866 TBC1D32Q96NH3 1257 aa7.13□□□□□ -1.27
VPS50-202ENST00000305866 KDM2AQ9Y2K7 1162 aa7.13□□□□□ -1.27
VPS50-202ENST00000305866 KIF13AQ9H1H9 1805 aa7.12□□□□□ -1.27
VPS50-202ENST00000305866 FAM43AQ8N2R8 423 aa7.12□□□□□ -1.27
VPS50-202ENST00000305866 KIF2CQ99661 725 aa7.12□□□□□ -1.27
VPS50-202ENST00000305866 XRN1Q8IZH2 1706 aaKnown RBP7.12□□□□□ -1.27
VPS50-202ENST00000305866 CFAP65Q6ZU64 1925 aaKnown RBP7.12□□□□□ -1.27
VPS50-202ENST00000305866 PDE3AQ14432 1141 aa7.12□□□□□ -1.27
VPS50-202ENST00000305866 PLEKHF1Q96S99 279 aa7.12□□□□□ -1.27
VPS50-202ENST00000305866 POGKQ9P215 609 aa7.12□□□□□ -1.27
VPS50-202ENST00000305866 PIK3R4Q99570 1358 aa7.11□□□□□ -1.27
VPS50-202ENST00000305866 WWC1Q8IX03 1113 aa7.11□□□□□ -1.27
VPS50-202ENST00000305866 FMN2Q9NZ56 1722 aa7.11□□□□□ -1.27
VPS50-202ENST00000305866 PEAK1Q9H792 1746 aa7.1□□□□□ -1.27
VPS50-202ENST00000305866 GOLGA2Q08379 1002 aa7.1□□□□□ -1.27
VPS50-202ENST00000305866 ERICH6Q7L0X2 663 aa7.1□□□□□ -1.27
VPS50-202ENST00000305866 DDRGK1Q96HY6 314 aa7.1□□□□□ -1.27
VPS50-202ENST00000305866 ITSN1Q15811 1721 aa7.1□□□□□ -1.27
VPS50-202ENST00000305866 ZNF326Q5BKZ1 582 aaKnown RBP7.1□□□□□ -1.27
VPS50-202ENST00000305866 RARSP54136 660 aaKnown RBP7.1□□□□□ -1.27
VPS50-202ENST00000305866 UBR1Q8IWV7 1749 aa7.1□□□□□ -1.27
VPS50-202ENST00000305866 SIRT1Q96EB6 747 aa7.09□□□□□ -1.27
VPS50-202ENST00000305866 ERBB4Q15303 1308 aa7.09□□□□□ -1.27
VPS50-202ENST00000305866 YTHDC2Q9H6S0 1430 aaKnown RBP7.09□□□□□ -1.27
VPS50-202ENST00000305866 FAM208AQ9UK61 1670 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms