RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 CFAP70Q5T0N1 1121 aa26.76■■□□□ 1.87
TMEM88-201ENST00000301599 SHPRHQ149N8 1683 aa26.74■■□□□ 1.87
TMEM88-201ENST00000301599 YTHDC2Q9H6S0 1430 aaKnown RBP26.73■■□□□ 1.87
TMEM88-201ENST00000301599 DHX57Q6P158 1386 aaKnown RBP26.73■■□□□ 1.87
TMEM88-201ENST00000301599 ESCO1Q5FWF5 840 aa26.73■■□□□ 1.87
TMEM88-201ENST00000301599 ZNF772Q68DY9 489 aaPredicted RBP26.73■■□□□ 1.87
TMEM88-201ENST00000301599 LRP6O75581 1613 aa26.72■■□□□ 1.87
TMEM88-201ENST00000301599 NHSL1Q5SYE7 1610 aa26.72■■□□□ 1.87
TMEM88-201ENST00000301599 STAC3Q96MF2 364 aa26.72■■□□□ 1.87
TMEM88-201ENST00000301599 SOS2Q07890 1332 aaPredicted RBP26.71■■□□□ 1.87
TMEM88-201ENST00000301599 MYOM2P54296 1465 aa26.71■■□□□ 1.87
TMEM88-201ENST00000301599 NRXN1Q9ULB1 1477 aa26.71■■□□□ 1.87
TMEM88-201ENST00000301599 DCAF11Q8TEB1 546 aa26.69■■□□□ 1.86
TMEM88-201ENST00000301599 KDM2AQ9Y2K7 1162 aa26.69■■□□□ 1.86
TMEM88-201ENST00000301599 PLEKHH1Q9ULM0 1364 aa26.69■■□□□ 1.86
TMEM88-201ENST00000301599 PNPLA6Q8IY17 1366 aa26.67■■□□□ 1.86
TMEM88-201ENST00000301599 NUTM2FA1L443 756 aa26.66■■□□□ 1.86
TMEM88-201ENST00000301599 NPHP3Q7Z494 1330 aa26.65■■□□□ 1.86
TMEM88-201ENST00000301599 CDC42BPGQ6DT37 1551 aa26.65■■□□□ 1.86
TMEM88-201ENST00000301599 FOXO3O43524 673 aa26.63■■□□□ 1.85
TMEM88-201ENST00000301599 LAMC1P11047 1609 aa26.62■■□□□ 1.85
TMEM88-201ENST00000301599 PRAM1Q96QH2 718 aa26.62■■□□□ 1.85
TMEM88-201ENST00000301599 POGKQ9P215 609 aa26.62■■□□□ 1.85
TMEM88-201ENST00000301599 KNDC1Q76NI1 1749 aa26.62■■□□□ 1.85
TMEM88-201ENST00000301599 AFF2P51816 1311 aa26.6■■□□□ 1.85
TMEM88-201ENST00000301599 SAFB2Q14151 953 aaKnown RBP eCLIP26.59■■□□□ 1.85
TMEM88-201ENST00000301599 C8orf37Q96NL8 207 aa26.59■■□□□ 1.85
TMEM88-201ENST00000301599 ADAMTS2O95450 1211 aa26.58■■□□□ 1.85
TMEM88-201ENST00000301599 RXRBP28702 533 aa26.58■■□□□ 1.85
TMEM88-201ENST00000301599 NGLY1Q96IV0 654 aa26.57■■□□□ 1.84
TMEM88-201ENST00000301599 TRAK1Q9UPV9 953 aa26.57■■□□□ 1.84
TMEM88-201ENST00000301599 XPCQ01831 940 aaPredicted RBP26.56■■□□□ 1.84
TMEM88-201ENST00000301599 QTRT2Q9H974 415 aaKnown RBP26.53■■□□□ 1.84
TMEM88-201ENST00000301599 KRT28Q7Z3Y7 464 aa26.52■■□□□ 1.84
TMEM88-201ENST00000301599 DLC1Q96QB1 1528 aa26.52■■□□□ 1.84
TMEM88-201ENST00000301599 PHF8Q9UPP1 1060 aa26.52■■□□□ 1.84
TMEM88-201ENST00000301599 PXDNQ92626 1479 aa26.5■■□□□ 1.83
TMEM88-201ENST00000301599 ADGRB1O14514 1584 aa26.5■■□□□ 1.83
TMEM88-201ENST00000301599 FMN2Q9NZ56 1722 aa26.49■■□□□ 1.83
TMEM88-201ENST00000301599 PSME1Q06323 249 aa26.49■■□□□ 1.83
TMEM88-201ENST00000301599 RBM6P78332 1123 aaKnown RBP26.47■■□□□ 1.83
TMEM88-201ENST00000301599 SPATA31A3Q5VYP0 1347 aa26.46■■□□□ 1.83
TMEM88-201ENST00000301599 MINK1Q8N4C8 1332 aaPredicted RBP26.45■■□□□ 1.83
TMEM88-201ENST00000301599 FNBP4Q8N3X1 1017 aaPredicted RBP26.45■■□□□ 1.82
TMEM88-201ENST00000301599 HIRIP3Q9BW71 556 aaPredicted RBP26.45■■□□□ 1.82
TMEM88-201ENST00000301599 USP21Q9UK80 565 aa26.45■■□□□ 1.82
TMEM88-201ENST00000301599 WASLO00401 505 aaPredicted RBP26.42■■□□□ 1.82
TMEM88-201ENST00000301599 COL22A1Q8NFW1 1626 aaPredicted RBP26.42■■□□□ 1.82
TMEM88-201ENST00000301599 KIF1AQ12756 1690 aa26.41■■□□□ 1.82
TMEM88-201ENST00000301599 ANKARQ7Z5J8 1434 aa26.41■■□□□ 1.82
TMEM88-201ENST00000301599 PMFBP1Q8TBY8 1022 aa26.41■■□□□ 1.82
TMEM88-201ENST00000301599 CDK12Q9NYV4 1490 aaPredicted RBP26.41■■□□□ 1.82
TMEM88-201ENST00000301599 TRPC5Q9UL62 973 aaPredicted RBP26.4■■□□□ 1.82
TMEM88-201ENST00000301599 EIF3AQ14152 1382 aaKnown RBP26.4■■□□□ 1.82
TMEM88-201ENST00000301599 SBNO1A3KN83 1393 aa26.36■■□□□ 1.81
TMEM88-201ENST00000301599 RGPD8O14715 1765 aaPredicted RBP26.36■■□□□ 1.81
TMEM88-201ENST00000301599 LMOD2Q6P5Q4 547 aa26.36■■□□□ 1.81
TMEM88-201ENST00000301599 ADGRB2O60241 1585 aa26.35■■□□□ 1.81
TMEM88-201ENST00000301599 HAP1P54257 671 aaPredicted RBP26.35■■□□□ 1.81
TMEM88-201ENST00000301599 UPF1Q92900 1129 aaKnown RBP eCLIP26.35■■□□□ 1.81
TMEM88-201ENST00000301599 NBPF1Q3BBV0 1214 aa26.34■■□□□ 1.81
TMEM88-201ENST00000301599 PRR36Q9H6K5 1346 aa26.34■■□□□ 1.81
TMEM88-201ENST00000301599 TNS3Q68CZ2 1445 aa26.32■■□□□ 1.8
TMEM88-201ENST00000301599 GPRASP1Q5JY77 1395 aa26.32■■□□□ 1.8
TMEM88-201ENST00000301599 NGDNQ8NEJ9 315 aaKnown RBP26.31■■□□□ 1.8
TMEM88-201ENST00000301599 L3MBTL2Q969R5 705 aa26.31■■□□□ 1.8
TMEM88-201ENST00000301599 SIN3AQ96ST3 1273 aa26.31■■□□□ 1.8
TMEM88-201ENST00000301599 ARHGEF10O15013 1369 aa26.31■■□□□ 1.8
TMEM88-201ENST00000301599 CABLES1Q8TDN4 633 aa26.3■■□□□ 1.8
TMEM88-201ENST00000301599 NUDT16Q96DE0 195 aaKnown RBP26.3■■□□□ 1.8
TMEM88-201ENST00000301599 CDK19Q9BWU1 502 aa26.3■■□□□ 1.8
TMEM88-201ENST00000301599 USP32Q8NFA0 1604 aa26.29■■□□□ 1.8
TMEM88-201ENST00000301599 ATRNO75882 1429 aa26.29■■□□□ 1.8
TMEM88-201ENST00000301599 BCL9LQ86UU0 1499 aa26.29■■□□□ 1.8
TMEM88-201ENST00000301599 TULP4Q9NRJ4 1543 aa26.29■■□□□ 1.8
TMEM88-201ENST00000301599 PLEKHG5O94827 1062 aa26.28■■□□□ 1.8
TMEM88-201ENST00000301599 NEUROD1Q13562 356 aa26.28■■□□□ 1.8
TMEM88-201ENST00000301599 UNC5CLQ8IV45 518 aa26.28■■□□□ 1.8
TMEM88-201ENST00000301599 RGS12O14924 1447 aa26.27■■□□□ 1.8
TMEM88-201ENST00000301599 KIAA1210Q9ULL0 1709 aa26.26■■□□□ 1.79
TMEM88-201ENST00000301599 GJD4Q96KN9 370 aaPredicted RBP26.26■■□□□ 1.79
TMEM88-201ENST00000301599 ARHGEF28Q8N1W1 1705 aaKnown RBP26.23■■□□□ 1.79
TMEM88-201ENST00000301599 CCDC61Q9Y6R9 512 aa26.23■■□□□ 1.79
TMEM88-201ENST00000301599 MARF1Q9Y4F3 1742 aaKnown RBP26.22■■□□□ 1.79
TMEM88-201ENST00000301599 PAK3O75914 559 aaPredicted RBP26.22■■□□□ 1.79
TMEM88-201ENST00000301599 CENPJQ9HC77 1338 aaPredicted RBP26.2■■□□□ 1.79
TMEM88-201ENST00000301599 SLIT2O94813 1529 aa26.2■■□□□ 1.79
TMEM88-201ENST00000301599 FAM83GA6ND36 823 aa26.18■■□□□ 1.78
TMEM88-201ENST00000301599 PLEKHG3A1L390 1219 aa26.17■■□□□ 1.78
TMEM88-201ENST00000301599 ATP7BP35670 1465 aa26.17■■□□□ 1.78
TMEM88-201ENST00000301599 SRPK2P78362 688 aaKnown RBP26.16■■□□□ 1.78
TMEM88-201ENST00000301599 NBPF8Q3BBV2 869 aa26.16■■□□□ 1.78
TMEM88-201ENST00000301599 ACEP12821 1306 aa26.15■■□□□ 1.78
TMEM88-201ENST00000301599 VPS72Q15906 364 aa26.15■■□□□ 1.78
TMEM88-201ENST00000301599 ATAD2Q6PL18 1390 aa26.15■■□□□ 1.78
TMEM88-201ENST00000301599 TRPM3Q9HCF6 1732 aaPredicted RBP26.13■■□□□ 1.77
TMEM88-201ENST00000301599 TRIM26Q12899 539 aaPredicted RBP26.12■■□□□ 1.77
TMEM88-201ENST00000301599 CCDC9Q9Y3X0 531 aaKnown RBP26.12■■□□□ 1.77
TMEM88-201ENST00000301599 POLR3AO14802 1390 aaPredicted RBP26.11■■□□□ 1.77
TMEM88-201ENST00000301599 CABP2Q9NPB3 220 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms