RNA–Protein interactions for RNA: ENST00000300658.8

PGAP3-201, Transcript of post-GPI attachment to proteins 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAP3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-201ENST00000300658 KIF13AQ9H1H9 1805 aa21.97■■□□□ 1.11
PGAP3-201ENST00000300658 CCDC146Q8IYE0 955 aa21.95■■□□□ 1.1
PGAP3-201ENST00000300658 CLTCQ00610 1675 aaKnown RBP21.95■■□□□ 1.1
PGAP3-201ENST00000300658 PPP6R1Q9UPN7 881 aa21.95■■□□□ 1.1
PGAP3-201ENST00000300658 EVC2Q86UK5 1308 aa21.94■■□□□ 1.1
PGAP3-201ENST00000300658 FANCIQ9NVI1 1328 aa21.94■■□□□ 1.1
PGAP3-201ENST00000300658 RRP1P56182 461 aaKnown RBP21.94■■□□□ 1.1
PGAP3-201ENST00000300658 TNNT2P45379 298 aaPredicted RBP21.94■■□□□ 1.1
PGAP3-201ENST00000300658 STAG3Q9UJ98 1225 aa21.94■■□□□ 1.1
PGAP3-201ENST00000300658 PRAM1Q96QH2 718 aa21.91■■□□□ 1.1
PGAP3-201ENST00000300658 ZNF521Q96K83 1311 aa21.91■■□□□ 1.1
PGAP3-201ENST00000300658 MORC1Q86VD1 984 aa21.9■■□□□ 1.1
PGAP3-201ENST00000300658 PTPRMP28827 1452 aa21.9■■□□□ 1.1
PGAP3-201ENST00000300658 PUS7Q96PZ0 661 aaKnown RBP21.89■■□□□ 1.1
PGAP3-201ENST00000300658 YTHDC2Q9H6S0 1430 aaKnown RBP21.89■■□□□ 1.09
PGAP3-201ENST00000300658 MINK1Q8N4C8 1332 aaPredicted RBP21.89■■□□□ 1.09
PGAP3-201ENST00000300658 A2ML1A8K2U0 1454 aa21.88■■□□□ 1.09
PGAP3-201ENST00000300658 APAF1O14727 1248 aa21.88■■□□□ 1.09
PGAP3-201ENST00000300658 ALKQ9UM73 1620 aa21.88■■□□□ 1.09
PGAP3-201ENST00000300658 EXOC6Q8TAG9 804 aa21.87■■□□□ 1.09
PGAP3-201ENST00000300658 SPATA31D1Q6ZQQ2 1576 aa21.87■■□□□ 1.09
PGAP3-201ENST00000300658 PLIN1O60240 522 aa21.87■■□□□ 1.09
PGAP3-201ENST00000300658 ARHGEF40Q8TER5 1519 aa21.87■■□□□ 1.09
PGAP3-201ENST00000300658 DUSP27Q5VZP5 1158 aa21.86■■□□□ 1.09
PGAP3-201ENST00000300658 SRPK2P78362 688 aaKnown RBP21.86■■□□□ 1.09
PGAP3-201ENST00000300658 ANKRD36BQ8N2N9 1353 aa21.85■■□□□ 1.09
PGAP3-201ENST00000300658 POLR3AO14802 1390 aaPredicted RBP21.85■■□□□ 1.09
PGAP3-201ENST00000300658 SPINK5Q9NQ38 1064 aaPredicted RBP21.85■■□□□ 1.09
PGAP3-201ENST00000300658 POGKQ9P215 609 aa21.85■■□□□ 1.09
PGAP3-201ENST00000300658 ZMYM3Q14202 1370 aa21.84■■□□□ 1.09
PGAP3-201ENST00000300658 CGNL1Q0VF96 1302 aa21.84■■□□□ 1.09
PGAP3-201ENST00000300658 RIMS2Q9UQ26 1411 aa21.82■■□□□ 1.08
PGAP3-201ENST00000300658 MTHFSP49914 203 aa21.82■■□□□ 1.08
PGAP3-201ENST00000300658 WAPLQ7Z5K2 1190 aa21.82■■□□□ 1.08
PGAP3-201ENST00000300658 A0A1W2PP64 1363 aa21.81■■□□□ 1.08
PGAP3-201ENST00000300658 GOLGA2Q08379 1002 aa21.81■■□□□ 1.08
PGAP3-201ENST00000300658 DAXXQ9UER7 740 aaPredicted RBP21.81■■□□□ 1.08
PGAP3-201ENST00000300658 DMRT2Q9Y5R5 561 aa21.81■■□□□ 1.08
PGAP3-201ENST00000300658 UBE2Q2Q8WVN8 375 aa21.8■■□□□ 1.08
PGAP3-201ENST00000300658 SLFN5Q08AF3 891 aa21.79■■□□□ 1.08
PGAP3-201ENST00000300658 NBR1Q14596 966 aa21.79■■□□□ 1.08
PGAP3-201ENST00000300658 CDK19Q9BWU1 502 aa21.79■■□□□ 1.08
PGAP3-201ENST00000300658 USP32Q8NFA0 1604 aa21.78■■□□□ 1.08
PGAP3-201ENST00000300658 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.78■■□□□ 1.08
PGAP3-201ENST00000300658 TRMT2AQ8IZ69 625 aaKnown RBP21.77■■□□□ 1.08
PGAP3-201ENST00000300658 ESF1Q9H501 851 aaKnown RBP21.77■■□□□ 1.08
PGAP3-201ENST00000300658 PLEKHG5O94827 1062 aa21.77■■□□□ 1.07
PGAP3-201ENST00000300658 C20orf194Q5TEA3 1177 aa21.76■■□□□ 1.07
PGAP3-201ENST00000300658 SHPRHQ149N8 1683 aa21.76■■□□□ 1.07
PGAP3-201ENST00000300658 CD163L1Q9NR16 1453 aa21.76■■□□□ 1.07
PGAP3-201ENST00000300658 GGNBP2Q9H3C7 697 aa21.76■■□□□ 1.07
PGAP3-201ENST00000300658 ABCC11Q96J66 1382 aa21.74■■□□□ 1.07
PGAP3-201ENST00000300658 RTN4Q9NQC3 1192 aaKnown RBP21.74■■□□□ 1.07
PGAP3-201ENST00000300658 CABP1Q9NZU7 370 aa21.74■■□□□ 1.07
PGAP3-201ENST00000300658 METP08581 1390 aa21.73■■□□□ 1.07
PGAP3-201ENST00000300658 ATAD2Q6PL18 1390 aa21.73■■□□□ 1.07
PGAP3-201ENST00000300658 FYB1O15117 783 aa21.73■■□□□ 1.07
PGAP3-201ENST00000300658 SETD1AO15047 1707 aaKnown RBP21.73■■□□□ 1.07
PGAP3-201ENST00000300658 CRBNQ96SW2 442 aa21.72■■□□□ 1.07
PGAP3-201ENST00000300658 RRP7AQ9Y3A4 280 aaKnown RBP21.71■■□□□ 1.07
PGAP3-201ENST00000300658 NSD2O96028 1365 aa21.71■■□□□ 1.07
PGAP3-201ENST00000300658 NINLQ9Y2I6 1382 aa21.71■■□□□ 1.07
PGAP3-201ENST00000300658 IL27Q8NEV9 243 aa21.71■■□□□ 1.07
PGAP3-201ENST00000300658 NRXN3Q9Y4C0 1643 aa21.71■■□□□ 1.07
PGAP3-201ENST00000300658 NEUROD2Q15784 382 aa21.7■■□□□ 1.06
PGAP3-201ENST00000300658 WWC1Q8IX03 1113 aa21.7■■□□□ 1.06
PGAP3-201ENST00000300658 TERF2IPQ9NYB0 399 aa21.7■■□□□ 1.06
PGAP3-201ENST00000300658 TNRQ92752 1358 aa21.69■■□□□ 1.06
PGAP3-201ENST00000300658 TXNDC2Q86VQ3 553 aa21.69■■□□□ 1.06
PGAP3-201ENST00000300658 CEBPAP49715 358 aaPredicted RBP21.68■■□□□ 1.06
PGAP3-201ENST00000300658 NLRP1Q9C000 1473 aa21.68■■□□□ 1.06
PGAP3-201ENST00000300658 TCP11L2Q8N4U5 519 aa21.68■■□□□ 1.06
PGAP3-201ENST00000300658 RUNDC1Q96C34 613 aa21.67■■□□□ 1.06
PGAP3-201ENST00000300658 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.66■■□□□ 1.06
PGAP3-201ENST00000300658 DLC1Q96QB1 1528 aa21.66■■□□□ 1.06
PGAP3-201ENST00000300658 E9PSI1 815 aa21.66■■□□□ 1.06
PGAP3-201ENST00000300658 CFAP53Q96M91 514 aa21.66■■□□□ 1.06
PGAP3-201ENST00000300658 FBLN1P23142 703 aa21.64■■□□□ 1.05
PGAP3-201ENST00000300658 U2AF1L5P0DN76 240 aaPredicted RBP21.64■■□□□ 1.05
PGAP3-201ENST00000300658 U2AF1Q01081 240 aaKnown RBP eCLIP21.64■■□□□ 1.05
PGAP3-201ENST00000300658 HDGFL2Q7Z4V5 671 aaPredicted RBP21.64■■□□□ 1.05
PGAP3-201ENST00000300658 BCAR3O75815 825 aa21.63■■□□□ 1.05
PGAP3-201ENST00000300658 NGEFQ8N5V2 710 aa21.63■■□□□ 1.05
PGAP3-201ENST00000300658 PHF23Q9BUL5 403 aaPredicted RBP21.63■■□□□ 1.05
PGAP3-201ENST00000300658 NKTRP30414 1462 aaKnown RBP21.63■■□□□ 1.05
PGAP3-201ENST00000300658 NCKAP5LQ9HCH0 1330 aa21.62■■□□□ 1.05
PGAP3-201ENST00000300658 TMEM2Q9UHN6 1383 aa21.62■■□□□ 1.05
PGAP3-201ENST00000300658 IQSEC2Q5JU85 1478 aa21.62■■□□□ 1.05
PGAP3-201ENST00000300658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.62■■□□□ 1.05
PGAP3-201ENST00000300658 LTKP29376 864 aa21.61■■□□□ 1.05
PGAP3-201ENST00000300658 WASLO00401 505 aaPredicted RBP21.61■■□□□ 1.05
PGAP3-201ENST00000300658 PAK3O75914 559 aaPredicted RBP21.6■■□□□ 1.05
PGAP3-201ENST00000300658 PLPPR3Q6T4P5 718 aa21.58■■□□□ 1.05
PGAP3-201ENST00000300658 UBR1Q8IWV7 1749 aa21.58■■□□□ 1.05
PGAP3-201ENST00000300658 COL3A1P02461 1466 aaPredicted RBP21.58■■□□□ 1.04
PGAP3-201ENST00000300658 SKAP1Q86WV1 359 aa21.57■■□□□ 1.04
PGAP3-201ENST00000300658 MED14O60244 1454 aa21.57■■□□□ 1.04
PGAP3-201ENST00000300658 U2SURPO15042 1029 aaKnown RBP21.57■■□□□ 1.04
PGAP3-201ENST00000300658 HDGFP51858 240 aaKnown RBP21.57■■□□□ 1.04
PGAP3-201ENST00000300658 PLEKHF1Q96S99 279 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms