RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 IFFO2Q5TF58 517 aa8.77□□□□□ -1.01
RAG1-201ENST00000299440 APAF1O14727 1248 aa8.77□□□□□ -1.01
RAG1-201ENST00000299440 FAM184AQ8NB25 1140 aa8.77□□□□□ -1.01
RAG1-201ENST00000299440 ANKRD50Q9ULJ7 1429 aa8.77□□□□□ -1.01
RAG1-201ENST00000299440 ZPR1O75312 459 aa8.77□□□□□ -1.01
RAG1-201ENST00000299440 SLC52A1Q9NWF4 448 aa8.77□□□□□ -1.01
RAG1-201ENST00000299440 USP47Q96K76 1375 aa8.76□□□□□ -1.01
RAG1-201ENST00000299440 PHF14O94880 888 aa8.76□□□□□ -1.01
RAG1-201ENST00000299440 MCTP1Q6DN14 999 aa8.76□□□□□ -1.01
RAG1-201ENST00000299440 WDHD1O75717 1129 aaPredicted RBP8.76□□□□□ -1.01
RAG1-201ENST00000299440 GAS2L2Q8NHY3 880 aa8.76□□□□□ -1.01
RAG1-201ENST00000299440 R3HCC1Q9Y3T6 440 aaKnown RBP8.76□□□□□ -1.01
RAG1-201ENST00000299440 KDM4AO75164 1064 aa8.76□□□□□ -1.01
RAG1-201ENST00000299440 CPLX2Q6PUV4 134 aaKnown RBP8.75□□□□□ -1.01
RAG1-201ENST00000299440 FBXO3Q9UK99 471 aa8.75□□□□□ -1.01
RAG1-201ENST00000299440 KIF3AQ9Y496 699 aa8.75□□□□□ -1.01
RAG1-201ENST00000299440 PTCD1O75127 700 aaKnown RBP8.75□□□□□ -1.01
RAG1-201ENST00000299440 CPLX1O14810 134 aa8.75□□□□□ -1.01
RAG1-201ENST00000299440 TRIM29Q14134 588 aa8.75□□□□□ -1.01
RAG1-201ENST00000299440 C16orf71Q8IYS4 520 aaPredicted RBP8.75□□□□□ -1.01
RAG1-201ENST00000299440 STK11IPQ8N1F8 1099 aa8.75□□□□□ -1.01
RAG1-201ENST00000299440 MPRIPQ6WCQ1 1025 aa8.74□□□□□ -1.01
RAG1-201ENST00000299440 RTEL1-TNFRSF6BF6WH68 1400 aa8.74□□□□□ -1.01
RAG1-201ENST00000299440 MYBBP1AQ9BQG0 1328 aaKnown RBP8.74□□□□□ -1.01
RAG1-201ENST00000299440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.74□□□□□ -1.01
RAG1-201ENST00000299440 TPD52L1Q16890 204 aaPredicted RBP8.74□□□□□ -1.01
RAG1-201ENST00000299440 ZKSCAN2Q63HK3 967 aa8.74□□□□□ -1.01
RAG1-201ENST00000299440 MPHOSPH8Q99549 860 aa8.74□□□□□ -1.01
RAG1-201ENST00000299440 CHMP4BP1P59074 171 aa8.74□□□□□ -1.01
RAG1-201ENST00000299440 CCDC85AQ96PX6 553 aaPredicted RBP8.74□□□□□ -1.01
RAG1-201ENST00000299440 TPM4P67936 248 aa8.73□□□□□ -1.01
RAG1-201ENST00000299440 FBXO31Q5XUX0 539 aaPredicted RBP8.73□□□□□ -1.01
RAG1-201ENST00000299440 SULT6B1Q6IMI4 303 aa8.73□□□□□ -1.01
RAG1-201ENST00000299440 TMOD3Q9NYL9 352 aa8.73□□□□□ -1.01
RAG1-201ENST00000299440 GNAI1P63096 354 aa8.73□□□□□ -1.01
RAG1-201ENST00000299440 TBC1D2BQ9UPU7 963 aa8.73□□□□□ -1.01
RAG1-201ENST00000299440 HMGB2P26583 209 aaKnown RBP8.73□□□□□ -1.01
RAG1-201ENST00000299440 ANO2Q9NQ90 1003 aa8.73□□□□□ -1.01
RAG1-201ENST00000299440 GNL3LQ9NVN8 582 aaKnown RBP8.73□□□□□ -1.01
RAG1-201ENST00000299440 FOSBP53539 338 aa8.73□□□□□ -1.01
RAG1-201ENST00000299440 UBTFL1P0CB47 393 aaPredicted RBP8.73□□□□□ -1.01
RAG1-201ENST00000299440 AK7Q96M32 723 aa8.73□□□□□ -1.01
RAG1-201ENST00000299440 PHLDB1Q86UU1 1377 aa8.72□□□□□ -1.01
RAG1-201ENST00000299440 FOXD4L6Q3SYB3 417 aaPredicted RBP8.72□□□□□ -1.01
RAG1-201ENST00000299440 FOXD4L3Q6VB84 417 aaPredicted RBP8.72□□□□□ -1.01
RAG1-201ENST00000299440 DNAJC2Q99543 621 aaKnown RBP8.72□□□□□ -1.01
RAG1-201ENST00000299440 CLEC11AQ9Y240 323 aa8.72□□□□□ -1.01
RAG1-201ENST00000299440 EXOC5O00471 708 aa8.72□□□□□ -1.01
RAG1-201ENST00000299440 RRS1Q15050 365 aaKnown RBP8.72□□□□□ -1.01
RAG1-201ENST00000299440 API5Q9BZZ5 524 aaKnown RBP8.72□□□□□ -1.01
RAG1-201ENST00000299440 AMOTL2Q9Y2J4 779 aa8.72□□□□□ -1.01
RAG1-201ENST00000299440 ZNF692Q9BU19 519 aaPredicted RBP8.72□□□□□ -1.01
RAG1-201ENST00000299440 FYCO1Q9BQS8 1478 aa8.72□□□□□ -1.01
RAG1-201ENST00000299440 RRBP1Q9P2E9 1410 aaKnown RBP8.72□□□□□ -1.01
RAG1-201ENST00000299440 WAPLQ7Z5K2 1190 aa8.72□□□□□ -1.01
RAG1-201ENST00000299440 RRP12Q5JTH9 1297 aaKnown RBP8.71□□□□□ -1.01
RAG1-201ENST00000299440 RUFY2Q8WXA3 655 aa8.71□□□□□ -1.01
RAG1-201ENST00000299440 TMOD2Q9NZR1 351 aa8.71□□□□□ -1.01
RAG1-201ENST00000299440 WDR78Q5VTH9 848 aa8.71□□□□□ -1.01
RAG1-201ENST00000299440 WWC2Q6AWC2 1192 aa8.71□□□□□ -1.01
RAG1-201ENST00000299440 PAF1Q8N7H5 531 aa8.71□□□□□ -1.01
RAG1-201ENST00000299440 PRKAR2BP31323 418 aa8.71□□□□□ -1.01
RAG1-201ENST00000299440 SLKQ9H2G2 1235 aaPredicted RBP8.71□□□□□ -1.01
RAG1-201ENST00000299440 CCER2I3L3R5 266 aa8.71□□□□□ -1.02
RAG1-201ENST00000299440 RALYLQ86SE5 291 aaKnown RBP8.71□□□□□ -1.02
RAG1-201ENST00000299440 SPINK5Q9NQ38 1064 aaPredicted RBP8.71□□□□□ -1.02
RAG1-201ENST00000299440 TOPBP1Q92547 1522 aa8.71□□□□□ -1.02
RAG1-201ENST00000299440 ZNF622Q969S3 477 aaKnown RBP eCLIP8.71□□□□□ -1.02
RAG1-201ENST00000299440 E9PSI1 815 aa8.7□□□□□ -1.02
RAG1-201ENST00000299440 COG6Q9Y2V7 657 aa8.7□□□□□ -1.02
RAG1-201ENST00000299440 STARD3NLO95772 234 aa8.7□□□□□ -1.02
RAG1-201ENST00000299440 CCDC30Q5VVM6 783 aa8.7□□□□□ -1.02
RAG1-201ENST00000299440 TTC39AQ5SRH9 613 aa8.7□□□□□ -1.02
RAG1-201ENST00000299440 CHMP4CQ96CF2 233 aa8.7□□□□□ -1.02
RAG1-201ENST00000299440 LMTK3Q96Q04 1460 aa8.7□□□□□ -1.02
RAG1-201ENST00000299440 ZKSCAN1P17029 563 aaPredicted RBP8.7□□□□□ -1.02
RAG1-201ENST00000299440 RUNDC1Q96C34 613 aa8.7□□□□□ -1.02
RAG1-201ENST00000299440 PHF8Q9UPP1 1060 aa8.7□□□□□ -1.02
RAG1-201ENST00000299440 MSH6P52701 1360 aa8.7□□□□□ -1.02
RAG1-201ENST00000299440 USHBP1Q8N6Y0 703 aa8.7□□□□□ -1.02
RAG1-201ENST00000299440 SLC12A5Q9H2X9 1139 aa8.7□□□□□ -1.02
RAG1-201ENST00000299440 HDGFL1Q5TGJ6 251 aa8.69□□□□□ -1.02
RAG1-201ENST00000299440 NBPF8Q3BBV2 869 aa8.69□□□□□ -1.02
RAG1-201ENST00000299440 NBPF14Q5TI25 921 aa8.69□□□□□ -1.02
RAG1-201ENST00000299440 KRT28Q7Z3Y7 464 aa8.69□□□□□ -1.02
RAG1-201ENST00000299440 CHRNA2Q15822 529 aa8.69□□□□□ -1.02
RAG1-201ENST00000299440 NUDT16Q96DE0 195 aaKnown RBP8.69□□□□□ -1.02
RAG1-201ENST00000299440 ST18O60284 1047 aa8.69□□□□□ -1.02
RAG1-201ENST00000299440 CADPS2Q86UW7 1296 aa8.69□□□□□ -1.02
RAG1-201ENST00000299440 KCNH5Q8NCM2 988 aa8.69□□□□□ -1.02
RAG1-201ENST00000299440 SIL1Q9H173 461 aa8.69□□□□□ -1.02
RAG1-201ENST00000299440 ZNF652Q9Y2D9 606 aa8.69□□□□□ -1.02
RAG1-201ENST00000299440 ERBINQ96RT1 1412 aa8.69□□□□□ -1.02
RAG1-201ENST00000299440 MPHOSPH10O00566 681 aaKnown RBP8.69□□□□□ -1.02
RAG1-201ENST00000299440 A0A0U1RQG5 324 aaPredicted RBP8.68□□□□□ -1.02
RAG1-201ENST00000299440 BTBD11A6QL63 1104 aa8.68□□□□□ -1.02
RAG1-201ENST00000299440 SLC3A2P08195 630 aaKnown RBP8.68□□□□□ -1.02
RAG1-201ENST00000299440 HSP90AB4PQ58FF6 505 aa8.68□□□□□ -1.02
RAG1-201ENST00000299440 RPGRQ92834 1020 aaKnown RBP8.68□□□□□ -1.02
RAG1-201ENST00000299440 PCMTD1Q96MG8 357 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms